RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 BCO2Q9BYV7 579 aa9.54□□□□□ -0.88
DDX56-211ENST00000479602 PLA2G2FQ9BZM2 168 aa9.54□□□□□ -0.88
DDX56-211ENST00000479602 IMPG2Q9BZV3 1241 aa9.54□□□□□ -0.88
DDX56-211ENST00000479602 TSPY26PQ9H489 355 aa9.54□□□□□ -0.88
DDX56-211ENST00000479602 CYP3A43Q9HB55 503 aa9.54□□□□□ -0.88
DDX56-211ENST00000479602 HCFC1R1Q9NWW0 138 aa9.54□□□□□ -0.88
DDX56-211ENST00000479602 GDE1Q9NZC3 331 aa9.54□□□□□ -0.88
DDX56-211ENST00000479602 CA14Q9ULX7 337 aa9.54□□□□□ -0.88
DDX56-211ENST00000479602 CDY1Q9Y6F8 540 aa9.54□□□□□ -0.88
DDX56-211ENST00000479602 A0A1W2PQC6 194 aa9.53□□□□□ -0.88
DDX56-211ENST00000479602 WDR27A2RRH5 827 aa9.53□□□□□ -0.88
DDX56-211ENST00000479602 LGALS16A8MUM7 142 aa9.53□□□□□ -0.88
DDX56-211ENST00000479602 KPNA7A9QM74 516 aa9.53□□□□□ -0.88
DDX56-211ENST00000479602 KCNJ18B7U540 433 aa9.53□□□□□ -0.88
DDX56-211ENST00000479602 CCL16O15467 120 aa9.53□□□□□ -0.88
DDX56-211ENST00000479602 XYLBO75191 536 aa9.53□□□□□ -0.88
DDX56-211ENST00000479602 SEC24AO95486 1093 aa9.53□□□□□ -0.88
DDX56-211ENST00000479602 VNN1O95497 513 aa9.53□□□□□ -0.88
DDX56-211ENST00000479602 LMNAP02545 664 aaKnown RBP9.53□□□□□ -0.88
DDX56-211ENST00000479602 ITGB3P05106 788 aa9.53□□□□□ -0.88
DDX56-211ENST00000479602 DLATP10515 647 aaKnown RBP9.53□□□□□ -0.88
DDX56-211ENST00000479602 ODC1P11926 461 aa9.53□□□□□ -0.88
DDX56-211ENST00000479602 P4HA1P13674 534 aa9.53□□□□□ -0.88
DDX56-211ENST00000479602 FCARP24071 287 aa9.53□□□□□ -0.88
DDX56-211ENST00000479602 TBXAS1P24557 533 aaPredicted RBP9.53□□□□□ -0.88
DDX56-211ENST00000479602 BRCC3P46736 316 aa9.53□□□□□ -0.88
DDX56-211ENST00000479602 EPHA5P54756 1037 aa9.53□□□□□ -0.88
DDX56-211ENST00000479602 STX17P56962 302 aa9.53□□□□□ -0.88
DDX56-211ENST00000479602 TPM4P67936 248 aa9.53□□□□□ -0.88
DDX56-211ENST00000479602 DLG4P78352 724 aa9.53□□□□□ -0.88
DDX56-211ENST00000479602 TFAMQ00059 246 aaKnown RBP9.53□□□□□ -0.88
DDX56-211ENST00000479602 ROR1Q01973 937 aa9.53□□□□□ -0.88
DDX56-211ENST00000479602 KCNH2Q12809 1159 aa9.53□□□□□ -0.88
DDX56-211ENST00000479602 KCNJ12Q14500 433 aa9.53□□□□□ -0.88
DDX56-211ENST00000479602 TPD52L1Q16890 204 aaPredicted RBP9.53□□□□□ -0.88
DDX56-211ENST00000479602 ISM2Q6H9L7 571 aa9.53□□□□□ -0.88
DDX56-211ENST00000479602 MTSS1LQ765P7 747 aa9.53□□□□□ -0.88
DDX56-211ENST00000479602 ERMP1Q7Z2K6 904 aa9.53□□□□□ -0.88
DDX56-211ENST00000479602 ZBTB44Q8NCP5 570 aa9.53□□□□□ -0.88
DDX56-211ENST00000479602 C18orf25Q96B23 403 aaPredicted RBP9.53□□□□□ -0.88
DDX56-211ENST00000479602 CCDC127Q96BQ5 260 aa9.53□□□□□ -0.88
DDX56-211ENST00000479602 SHDQ96IW2 340 aa9.53□□□□□ -0.88
DDX56-211ENST00000479602 TUBGCP2Q9BSJ2 902 aa9.53□□□□□ -0.88
DDX56-211ENST00000479602 FOXQ1Q9C009 403 aa9.53□□□□□ -0.88
DDX56-211ENST00000479602 NDST4Q9H3R1 872 aa9.53□□□□□ -0.88
DDX56-211ENST00000479602 GOLGA2P5Q9HBQ8 144 aa9.53□□□□□ -0.88
DDX56-211ENST00000479602 CBX8Q9HC52 389 aa9.53□□□□□ -0.88
DDX56-211ENST00000479602 PLCB1Q9NQ66 1216 aa9.53□□□□□ -0.88
DDX56-211ENST00000479602 RAB20Q9NX57 234 aa9.53□□□□□ -0.88
DDX56-211ENST00000479602 MAGEC2Q9UBF1 373 aaPredicted RBP9.53□□□□□ -0.88
DDX56-211ENST00000479602 CNTN6Q9UQ52 1028 aa9.53□□□□□ -0.88
DDX56-211ENST00000479602 FANCMQ8IYD8 2048 aa9.53□□□□□ -0.88
DDX56-211ENST00000479602 CNOT1A5YKK6 2376 aaKnown RBP9.52□□□□□ -0.88
DDX56-211ENST00000479602 A0A1B0GTH6 734 aa9.52□□□□□ -0.89
DDX56-211ENST00000479602 OR6C75A6NL08 312 aa9.52□□□□□ -0.89
DDX56-211ENST00000479602 BECN2A8MW95 431 aa9.52□□□□□ -0.89
DDX56-211ENST00000479602 LILRB5O75023 590 aa9.52□□□□□ -0.89
DDX56-211ENST00000479602 VNN2O95498 520 aa9.52□□□□□ -0.89
DDX56-211ENST00000479602 HLA-DRAP01903 254 aa9.52□□□□□ -0.89
DDX56-211ENST00000479602 TPM2P07951 284 aa9.52□□□□□ -0.89
DDX56-211ENST00000479602 RHOP08100 348 aa9.52□□□□□ -0.89
DDX56-211ENST00000479602 TDGF1P13385 188 aa9.52□□□□□ -0.89
DDX56-211ENST00000479602 PTPN2P17706 415 aa9.52□□□□□ -0.89
DDX56-211ENST00000479602 WARSP23381 471 aaKnown RBP9.52□□□□□ -0.89
DDX56-211ENST00000479602 POLR2BP30876 1174 aaKnown RBP9.52□□□□□ -0.89
DDX56-211ENST00000479602 CCR2P41597 374 aa9.52□□□□□ -0.89
DDX56-211ENST00000479602 RPS9P46781 194 aaKnown RBP9.52□□□□□ -0.89
DDX56-211ENST00000479602 LHX1P48742 406 aa9.52□□□□□ -0.89
DDX56-211ENST00000479602 NOP14P78316 857 aaKnown RBP9.52□□□□□ -0.89
DDX56-211ENST00000479602 MYL7Q01449 175 aa9.52□□□□□ -0.89
DDX56-211ENST00000479602 KRT31Q15323 416 aa9.52□□□□□ -0.89
DDX56-211ENST00000479602 MLF2Q15773 248 aaPredicted RBP9.52□□□□□ -0.89
DDX56-211ENST00000479602 CBWD6Q4V339 395 aa9.52□□□□□ -0.89
DDX56-211ENST00000479602 PABPC1LQ4VXU2 614 aaKnown RBP9.52□□□□□ -0.89
DDX56-211ENST00000479602 VWA3BQ502W6 1294 aa9.52□□□□□ -0.89
DDX56-211ENST00000479602 FIGNQ5HY92 759 aa9.52□□□□□ -0.89
DDX56-211ENST00000479602 CBWD3Q5JTY5 395 aa9.52□□□□□ -0.89
DDX56-211ENST00000479602 CBWD5Q5RIA9 395 aa9.52□□□□□ -0.89
DDX56-211ENST00000479602 VARS2Q5ST30 1063 aaKnown RBP9.52□□□□□ -0.89
DDX56-211ENST00000479602 LIN9Q5TKA1 542 aa9.52□□□□□ -0.89
DDX56-211ENST00000479602 TANGO2Q6ICL3 276 aa9.52□□□□□ -0.89
DDX56-211ENST00000479602 UNC93AQ86WB7 457 aa9.52□□□□□ -0.89
DDX56-211ENST00000479602 FMNL3Q8IVF7 1028 aa9.52□□□□□ -0.89
DDX56-211ENST00000479602 AOPEPQ8N6M6 819 aa9.52□□□□□ -0.89
DDX56-211ENST00000479602 UBR7Q8N806 425 aa9.52□□□□□ -0.89
DDX56-211ENST00000479602 CCDC150Q8NCX0 1101 aa9.52□□□□□ -0.89
DDX56-211ENST00000479602 C2orf15Q8WU43 125 aaKnown RBP9.52□□□□□ -0.89
DDX56-211ENST00000479602 HPDLQ96IR7 371 aa9.52□□□□□ -0.89
DDX56-211ENST00000479602 NELL2Q99435 816 aa9.52□□□□□ -0.89
DDX56-211ENST00000479602 LRRC3Q9BY71 257 aa9.52□□□□□ -0.89
DDX56-211ENST00000479602 EDEM3Q9BZQ6 932 aa9.52□□□□□ -0.89
DDX56-211ENST00000479602 NIF3L1Q9GZT8 377 aa9.52□□□□□ -0.89
DDX56-211ENST00000479602 TRPV4Q9HBA0 871 aa9.52□□□□□ -0.89
DDX56-211ENST00000479602 TRPV5Q9NQA5 729 aa9.52□□□□□ -0.89
DDX56-211ENST00000479602 SAMSN1Q9NSI8 373 aaKnown RBP9.52□□□□□ -0.89
DDX56-211ENST00000479602 FANCLQ9NW38 375 aa9.52□□□□□ -0.89
DDX56-211ENST00000479602 FBXO4Q9UKT5 387 aa9.52□□□□□ -0.89
DDX56-211ENST00000479602 MYO6Q9UM54 1294 aa9.52□□□□□ -0.89
DDX56-211ENST00000479602 R4GN57 208 aa9.52□□□□□ -0.89
DDX56-211ENST00000479602 CHD8Q9HCK8 2581 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms