RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 SORCS3Q9UPU3 1222 aa16.49■□□□□ 0.23
C9orf3-217ENST00000479161 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.49■□□□□ 0.23
C9orf3-217ENST00000479161 ZNF638Q14966 1978 aaKnown RBP16.48■□□□□ 0.23
C9orf3-217ENST00000479161 GTPBP10A4D1E9 387 aaKnown RBP16.48■□□□□ 0.23
C9orf3-217ENST00000479161 TRIM66O15016 1216 aa16.48■□□□□ 0.23
C9orf3-217ENST00000479161 ATP2C2O75185 946 aa16.48■□□□□ 0.23
C9orf3-217ENST00000479161 NOL4O94818 638 aa16.48■□□□□ 0.23
C9orf3-217ENST00000479161 TBXAS1P24557 533 aaPredicted RBP16.48■□□□□ 0.23
C9orf3-217ENST00000479161 CYP2F1P24903 491 aa16.48■□□□□ 0.23
C9orf3-217ENST00000479161 GBP2P32456 591 aaPredicted RBP16.48■□□□□ 0.23
C9orf3-217ENST00000479161 NTHL1P78549 312 aa16.48■□□□□ 0.23
C9orf3-217ENST00000479161 SPOPLQ6IQ16 392 aa16.48■□□□□ 0.23
C9orf3-217ENST00000479161 NPAS3Q8IXF0 933 aa16.48■□□□□ 0.23
C9orf3-217ENST00000479161 LMO3Q8TAP4 145 aa16.48■□□□□ 0.23
C9orf3-217ENST00000479161 ITFG1Q8TB96 612 aa16.48■□□□□ 0.23
C9orf3-217ENST00000479161 MYLPFQ96A32 169 aa16.48■□□□□ 0.23
C9orf3-217ENST00000479161 JAKMIP2Q96AA8 810 aa16.48■□□□□ 0.23
C9orf3-217ENST00000479161 SEPT5Q99719 369 aaPredicted RBP16.48■□□□□ 0.23
C9orf3-217ENST00000479161 PI4K2AQ9BTU6 479 aa16.48■□□□□ 0.23
C9orf3-217ENST00000479161 NT5C1AQ9BXI3 368 aa16.48■□□□□ 0.23
C9orf3-217ENST00000479161 TRPV4Q9HBA0 871 aa16.48■□□□□ 0.23
C9orf3-217ENST00000479161 ANO10Q9NW15 660 aa16.48■□□□□ 0.23
C9orf3-217ENST00000479161 UXTQ9UBK9 157 aaPredicted RBP16.48■□□□□ 0.23
C9orf3-217ENST00000479161 LIMD1Q9UGP4 676 aa16.48■□□□□ 0.23
C9orf3-217ENST00000479161 MYH10P35580 1976 aa16.47■□□□□ 0.23
C9orf3-217ENST00000479161 ATP8B3O60423 1300 aa16.47■□□□□ 0.23
C9orf3-217ENST00000479161 HCRTO43612 131 aa16.47■□□□□ 0.23
C9orf3-217ENST00000479161 CILPO75339 1184 aa16.47■□□□□ 0.23
C9orf3-217ENST00000479161 MOSPD3O75425 235 aa16.47■□□□□ 0.23
C9orf3-217ENST00000479161 AFPP02771 609 aaKnown RBP16.47■□□□□ 0.23
C9orf3-217ENST00000479161 HMGA1P17096 107 aaKnown RBP16.47■□□□□ 0.23
C9orf3-217ENST00000479161 CDC25CP30307 473 aa16.47■□□□□ 0.23
C9orf3-217ENST00000479161 NDST1P52848 882 aa16.47■□□□□ 0.23
C9orf3-217ENST00000479161 YWHAEP62258 255 aaKnown RBP16.47■□□□□ 0.23
C9orf3-217ENST00000479161 SLC5A9Q2M3M2 681 aa16.47■□□□□ 0.23
C9orf3-217ENST00000479161 SASS6Q6UVJ0 657 aa16.47■□□□□ 0.23
C9orf3-217ENST00000479161 GET4Q7L5D6 327 aaPredicted RBP16.47■□□□□ 0.23
C9orf3-217ENST00000479161 EDAQ92838 391 aa16.47■□□□□ 0.23
C9orf3-217ENST00000479161 FAM81BQ96LP2 452 aa16.47■□□□□ 0.23
C9orf3-217ENST00000479161 C1QTNF1Q9BXJ1 281 aa16.47■□□□□ 0.23
C9orf3-217ENST00000479161 MMRN2Q9H8L6 949 aa16.47■□□□□ 0.23
C9orf3-217ENST00000479161 KCNK12Q9HB15 430 aa16.47■□□□□ 0.23
C9orf3-217ENST00000479161 TECTAO75443 2155 aa16.47■□□□□ 0.23
C9orf3-217ENST00000479161 LETM1O95202 739 aaPredicted RBP16.46■□□□□ 0.23
C9orf3-217ENST00000479161 DDX6P26196 483 aaKnown RBP eCLIP16.46■□□□□ 0.23
C9orf3-217ENST00000479161 CCR2P41597 374 aa16.46■□□□□ 0.23
C9orf3-217ENST00000479161 PSMC1P62191 440 aaKnown RBP16.46■□□□□ 0.23
C9orf3-217ENST00000479161 TDGQ13569 410 aa16.46■□□□□ 0.23
C9orf3-217ENST00000479161 MTMR3Q13615 1198 aa16.46■□□□□ 0.23
C9orf3-217ENST00000479161 HTR4Q13639 388 aa16.46■□□□□ 0.23
C9orf3-217ENST00000479161 TPD52L1Q16890 204 aaPredicted RBP16.46■□□□□ 0.23
C9orf3-217ENST00000479161 KLHL40Q2TBA0 621 aa16.46■□□□□ 0.23
C9orf3-217ENST00000479161 MDH1BQ5I0G3 518 aa16.46■□□□□ 0.23
C9orf3-217ENST00000479161 EHBP1Q8NDI1 1231 aa16.46■□□□□ 0.23
C9orf3-217ENST00000479161 E2F7Q96AV8 911 aa16.46■□□□□ 0.23
C9orf3-217ENST00000479161 CNOT6LQ96LI5 555 aaKnown RBP16.46■□□□□ 0.23
C9orf3-217ENST00000479161 TTLL2Q9BWV7 592 aa16.46■□□□□ 0.23
C9orf3-217ENST00000479161 IL21Q9HBE4 155 aa16.46■□□□□ 0.23
C9orf3-217ENST00000479161 CSNK1G1Q9HCP0 422 aa16.46■□□□□ 0.23
C9orf3-217ENST00000479161 COMMD8Q9NX08 183 aa16.46■□□□□ 0.23
C9orf3-217ENST00000479161 MUTYHQ9UIF7 546 aa16.46■□□□□ 0.23
C9orf3-217ENST00000479161 OBSL1O75147 1896 aa16.46■□□□□ 0.22
C9orf3-217ENST00000479161 ANAPC1Q9H1A4 1944 aa16.45■□□□□ 0.22
C9orf3-217ENST00000479161 GPR37L1O60883 481 aa16.45■□□□□ 0.22
C9orf3-217ENST00000479161 ECI2O75521 394 aa16.45■□□□□ 0.22
C9orf3-217ENST00000479161 PFKLP17858 780 aa16.45■□□□□ 0.22
C9orf3-217ENST00000479161 BDNFP23560 247 aa16.45■□□□□ 0.22
C9orf3-217ENST00000479161 RAP1GAPP47736 663 aa16.45■□□□□ 0.22
C9orf3-217ENST00000479161 PPP3CCP48454 512 aa16.45■□□□□ 0.22
C9orf3-217ENST00000479161 ZXDAP98168 799 aa16.45■□□□□ 0.22
C9orf3-217ENST00000479161 CYP27A1Q02318 531 aa16.45■□□□□ 0.22
C9orf3-217ENST00000479161 GCNT1Q02742 428 aa16.45■□□□□ 0.22
C9orf3-217ENST00000479161 CUL2Q13617 745 aa16.45■□□□□ 0.22
C9orf3-217ENST00000479161 TAF12Q16514 161 aa16.45■□□□□ 0.22
C9orf3-217ENST00000479161 STX1AQ16623 288 aa16.45■□□□□ 0.22
C9orf3-217ENST00000479161 SCARA5Q6ZMJ2 495 aa16.45■□□□□ 0.22
C9orf3-217ENST00000479161 PAQR9Q6ZVX9 377 aa16.45■□□□□ 0.22
C9orf3-217ENST00000479161 GAREM2Q75VX8 874 aa16.45■□□□□ 0.22
C9orf3-217ENST00000479161 HS6ST3Q8IZP7 471 aa16.45■□□□□ 0.22
C9orf3-217ENST00000479161 FUKQ8N0W3 1084 aa16.45■□□□□ 0.22
C9orf3-217ENST00000479161 SHKBP1Q8TBC3 707 aa16.45■□□□□ 0.22
C9orf3-217ENST00000479161 WHAMMQ8TF30 809 aa16.45■□□□□ 0.22
C9orf3-217ENST00000479161 KHSRPQ92945 711 aaKnown RBP eCLIP16.45■□□□□ 0.226e-6■■■■□ 21
C9orf3-217ENST00000479161 TATDN2Q93075 761 aa16.45■□□□□ 0.22
C9orf3-217ENST00000479161 SMARCD1Q96GM5 515 aa16.45■□□□□ 0.22
C9orf3-217ENST00000479161 NT5C1BQ96P26 610 aa16.45■□□□□ 0.22
C9orf3-217ENST00000479161 HNRNPABQ99729 332 aaKnown RBP16.45■□□□□ 0.22
C9orf3-217ENST00000479161 B3GNT5Q9BYG0 378 aa16.45■□□□□ 0.22
C9orf3-217ENST00000479161 DPEP3Q9H4B8 488 aa16.45■□□□□ 0.22
C9orf3-217ENST00000479161 PNPLA8Q9NP80 782 aa16.45■□□□□ 0.22
C9orf3-217ENST00000479161 CISHQ9NSE2 258 aa16.45■□□□□ 0.22
C9orf3-217ENST00000479161 TMEM63CQ9P1W3 806 aa16.45■□□□□ 0.22
C9orf3-217ENST00000479161 KIAA1257Q9ULG3 409 aa16.45■□□□□ 0.22
C9orf3-217ENST00000479161 NUP210Q8TEM1 1887 aaPredicted RBP16.45■□□□□ 0.22
C9orf3-217ENST00000479161 LRRN2O75325 713 aa16.44■□□□□ 0.22
C9orf3-217ENST00000479161 SOAT2O75908 522 aa16.44■□□□□ 0.22
C9orf3-217ENST00000479161 F11P03951 625 aa16.44■□□□□ 0.22
C9orf3-217ENST00000479161 EEF1GP26641 437 aaKnown RBP16.44■□□□□ 0.22
C9orf3-217ENST00000479161 MAN2A1Q16706 1144 aa16.44■□□□□ 0.22
C9orf3-217ENST00000479161 DDR2Q16832 855 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms