RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 MGAT5BQ3V5L5 792 aa13.32□□□□□ -0.28
HDAC8-217ENST00000478743 RABEPKQ7Z6M1 372 aa13.32□□□□□ -0.28
HDAC8-217ENST00000478743 NXPE2Q96DL1 559 aa13.32□□□□□ -0.28
HDAC8-217ENST00000478743 FAM20AQ96MK3 541 aa13.32□□□□□ -0.28
HDAC8-217ENST00000478743 CYP2S1Q96SQ9 504 aa13.32□□□□□ -0.28
HDAC8-217ENST00000478743 SLC26A6Q9BXS9 759 aa13.32□□□□□ -0.28
HDAC8-217ENST00000478743 SLC6A17Q9H1V8 727 aa13.32□□□□□ -0.28
HDAC8-217ENST00000478743 ANKEF1Q9NU02 776 aa13.32□□□□□ -0.28
HDAC8-217ENST00000478743 SLC38A7Q9NVC3 462 aa13.32□□□□□ -0.28
HDAC8-217ENST00000478743 CNTN3Q9P232 1028 aa13.32□□□□□ -0.28
HDAC8-217ENST00000478743 PCDHA4Q9UN74 947 aa13.32□□□□□ -0.28
HDAC8-217ENST00000478743 CYP8B1Q9UNU6 501 aa13.32□□□□□ -0.28
HDAC8-217ENST00000478743 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.32□□□□□ -0.28
HDAC8-217ENST00000478743 TP53BP1Q12888 1972 aaPredicted RBP13.31□□□□□ -0.28
HDAC8-217ENST00000478743 OR6C75A6NL08 312 aa13.31□□□□□ -0.28
HDAC8-217ENST00000478743 KRT38O76015 456 aa13.31□□□□□ -0.28
HDAC8-217ENST00000478743 C6P13671 934 aa13.31□□□□□ -0.28
HDAC8-217ENST00000478743 RPL9P32969 192 aaKnown RBP13.31□□□□□ -0.28
HDAC8-217ENST00000478743 HSPA4P34932 840 aa13.31□□□□□ -0.28
HDAC8-217ENST00000478743 MRPS21P82921 87 aaKnown RBP13.31□□□□□ -0.28
HDAC8-217ENST00000478743 ZXDBP98169 803 aa13.31□□□□□ -0.28
HDAC8-217ENST00000478743 KDSRQ06136 332 aa13.31□□□□□ -0.28
HDAC8-217ENST00000478743 ZNF268Q14587 947 aaPredicted RBP13.31□□□□□ -0.28
HDAC8-217ENST00000478743 PTPRNQ16849 979 aa13.31□□□□□ -0.28
HDAC8-217ENST00000478743 SEZ6Q53EL9 994 aa13.31□□□□□ -0.28
HDAC8-217ENST00000478743 SDHAF4Q5VUM1 108 aa13.31□□□□□ -0.28
HDAC8-217ENST00000478743 RGL4Q8IZJ4 473 aa13.31□□□□□ -0.28
HDAC8-217ENST00000478743 EXOC4Q96A65 974 aa13.31□□□□□ -0.28
HDAC8-217ENST00000478743 AIFM3Q96NN9 605 aa13.31□□□□□ -0.28
HDAC8-217ENST00000478743 TM7SF3Q9NS93 570 aa13.31□□□□□ -0.28
HDAC8-217ENST00000478743 HCN2Q9UL51 889 aa13.31□□□□□ -0.28
HDAC8-217ENST00000478743 CAPN8A6NHC0 703 aa13.3□□□□□ -0.28
HDAC8-217ENST00000478743 ABLIM1O14639 778 aa13.3□□□□□ -0.28
HDAC8-217ENST00000478743 SCAMP3O14828 347 aaKnown RBP13.3□□□□□ -0.28
HDAC8-217ENST00000478743 TRIM66O15016 1216 aa13.3□□□□□ -0.28
HDAC8-217ENST00000478743 CYP17A1P05093 508 aa13.3□□□□□ -0.28
HDAC8-217ENST00000478743 MARCKSP29966 332 aaPredicted RBP13.3□□□□□ -0.28
HDAC8-217ENST00000478743 AARSP49588 968 aaKnown RBP eCLIP13.3□□□□□ -0.28
HDAC8-217ENST00000478743 CSRP3P50461 194 aa13.3□□□□□ -0.28
HDAC8-217ENST00000478743 YARSP54577 528 aaKnown RBP13.3□□□□□ -0.28
HDAC8-217ENST00000478743 VEPH1Q14D04 833 aa13.3□□□□□ -0.28
HDAC8-217ENST00000478743 SLC39A12Q504Y0 691 aa13.3□□□□□ -0.28
HDAC8-217ENST00000478743 PRICKLE2Q7Z3G6 844 aa13.3□□□□□ -0.28
HDAC8-217ENST00000478743 MON1AQ86VX9 555 aa13.3□□□□□ -0.28
HDAC8-217ENST00000478743 SPACA3Q8IXA5 215 aa13.3□□□□□ -0.28
HDAC8-217ENST00000478743 BLIDQ8IZY5 108 aa13.3□□□□□ -0.28
HDAC8-217ENST00000478743 SNIP1Q8TAD8 396 aaKnown RBP13.3□□□□□ -0.28
HDAC8-217ENST00000478743 DEPTORQ8TB45 409 aa13.3□□□□□ -0.28
HDAC8-217ENST00000478743 RHBDD1Q8TEB9 315 aa13.3□□□□□ -0.28
HDAC8-217ENST00000478743 SPIRE2Q8WWL2 714 aa13.3□□□□□ -0.28
HDAC8-217ENST00000478743 YTHDC1Q96MU7 727 aaKnown RBP13.3□□□□□ -0.28
HDAC8-217ENST00000478743 HSD17B14Q9BPX1 270 aa13.3□□□□□ -0.28
HDAC8-217ENST00000478743 CCDC94Q9BW85 323 aaPredicted RBP13.3□□□□□ -0.28
HDAC8-217ENST00000478743 C2orf40Q9H1Z8 148 aa13.3□□□□□ -0.28
HDAC8-217ENST00000478743 GAREM1Q9H706 876 aa13.3□□□□□ -0.28
HDAC8-217ENST00000478743 CPNE5Q9HCH3 593 aa13.3□□□□□ -0.28
HDAC8-217ENST00000478743 GMIPQ9P107 970 aa13.3□□□□□ -0.28
HDAC8-217ENST00000478743 BSNQ9UPA5 3926 aa13.29□□□□□ -0.28
HDAC8-217ENST00000478743 RRP8O43159 456 aaKnown RBP13.29□□□□□ -0.28
HDAC8-217ENST00000478743 NTRK1P04629 796 aa13.29□□□□□ -0.28
HDAC8-217ENST00000478743 HARSP12081 509 aaKnown RBP13.29□□□□□ -0.28
HDAC8-217ENST00000478743 IL12RB1P42701 662 aa13.29□□□□□ -0.28
HDAC8-217ENST00000478743 WASP42768 502 aa13.29□□□□□ -0.28
HDAC8-217ENST00000478743 RCAN1P53805 252 aa13.29□□□□□ -0.28
HDAC8-217ENST00000478743 FAM160A1Q05DH4 1040 aa13.29□□□□□ -0.28
HDAC8-217ENST00000478743 DMP1Q13316 513 aaPredicted RBP13.29□□□□□ -0.28
HDAC8-217ENST00000478743 MYBPC2Q14324 1141 aa13.29□□□□□ -0.28
HDAC8-217ENST00000478743 ZNF568Q3ZCX4 644 aa13.29□□□□□ -0.28
HDAC8-217ENST00000478743 OVOS1Q6IE37 1185 aa13.29□□□□□ -0.28
HDAC8-217ENST00000478743 PPP4R3AQ6IN85 833 aa13.29□□□□□ -0.28
HDAC8-217ENST00000478743 SLC36A4Q6YBV0 504 aa13.29□□□□□ -0.28
HDAC8-217ENST00000478743 DBX2Q6ZNG2 339 aa13.29□□□□□ -0.28
HDAC8-217ENST00000478743 MIB1Q86YT6 1006 aa13.29□□□□□ -0.28
HDAC8-217ENST00000478743 ZCCHC9Q8N567 271 aaKnown RBP13.29□□□□□ -0.28
HDAC8-217ENST00000478743 SH3RF2Q8TEC5 729 aa13.29□□□□□ -0.28
HDAC8-217ENST00000478743 TTC9Q92623 222 aa13.29□□□□□ -0.28
HDAC8-217ENST00000478743 CCDC43Q96MW1 224 aaKnown RBP13.29□□□□□ -0.28
HDAC8-217ENST00000478743 NCOA5Q9HCD5 579 aaKnown RBP13.29□□□□□ -0.28
HDAC8-217ENST00000478743 TRPC7Q9HCX4 862 aa13.29□□□□□ -0.28
HDAC8-217ENST00000478743 PTPRHQ9HD43 1115 aa13.29□□□□□ -0.28
HDAC8-217ENST00000478743 TOPORSQ9NS56 1045 aaPredicted RBP13.29□□□□□ -0.28
HDAC8-217ENST00000478743 TNFSF13BQ9Y275 285 aa13.29□□□□□ -0.28
HDAC8-217ENST00000478743 SLCO1B1Q9Y6L6 691 aa13.29□□□□□ -0.28
HDAC8-217ENST00000478743 FAM205CA6NFA0 338 aa13.28□□□□□ -0.28
HDAC8-217ENST00000478743 BTBD18B2RXH4 712 aa13.28□□□□□ -0.28
HDAC8-217ENST00000478743 E9PAM4 449 aa13.28□□□□□ -0.28
HDAC8-217ENST00000478743 NDUFV2P19404 249 aa13.28□□□□□ -0.28
HDAC8-217ENST00000478743 NAMPTP43490 491 aa13.28□□□□□ -0.28
HDAC8-217ENST00000478743 BYSLQ13895 437 aaKnown RBP13.28□□□□□ -0.28
HDAC8-217ENST00000478743 EARS2Q5JPH6 523 aaKnown RBP13.28□□□□□ -0.28
HDAC8-217ENST00000478743 EOGTQ5NDL2 527 aa13.28□□□□□ -0.28
HDAC8-217ENST00000478743 DHX32Q7L7V1 743 aaKnown RBP13.28□□□□□ -0.28
HDAC8-217ENST00000478743 TAS1R3Q7RTX0 852 aa13.28□□□□□ -0.28
HDAC8-217ENST00000478743 LRRTM3Q86VH5 581 aa13.28□□□□□ -0.28
HDAC8-217ENST00000478743 RASEFQ8IZ41 740 aa13.28□□□□□ -0.28
HDAC8-217ENST00000478743 ZNF419Q96HQ0 510 aaPredicted RBP13.28□□□□□ -0.28
HDAC8-217ENST00000478743 PI4K2AQ9BTU6 479 aa13.28□□□□□ -0.28
HDAC8-217ENST00000478743 RNF26Q9BY78 433 aaPredicted RBP13.28□□□□□ -0.28
HDAC8-217ENST00000478743 CD248Q9HCU0 757 aa13.28□□□□□ -0.28
HDAC8-217ENST00000478743 KCNK4Q9NYG8 393 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms