RNA–Protein interactions for RNA: ENST00000478454.5

CCNL1-220, Transcript of cyclin L1, humanhuman

TSL 4

Gene CCNL1, Length 580 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-220ENST00000478454 COBLL1Q53SF7 1204 aa4.84□□□□□ -1.63
CCNL1-220ENST00000478454 ARHGAP40Q5TG30 622 aa4.84□□□□□ -1.63
CCNL1-220ENST00000478454 PPP4R4Q6NUP7 873 aa4.84□□□□□ -1.63
CCNL1-220ENST00000478454 OLFML1Q6UWY5 402 aa4.84□□□□□ -1.63
CCNL1-220ENST00000478454 FAM136AQ96C01 138 aa4.84□□□□□ -1.63
CCNL1-220ENST00000478454 SUCLG2Q96I99 432 aa4.84□□□□□ -1.63
CCNL1-220ENST00000478454 FBXL20Q96IG2 436 aa4.84□□□□□ -1.63
CCNL1-220ENST00000478454 ZNF518BQ9C0D4 1074 aa4.84□□□□□ -1.63
CCNL1-220ENST00000478454 LRRC27Q9C0I9 530 aa4.84□□□□□ -1.63
CCNL1-220ENST00000478454 CXorf36Q9H7Y0 433 aa4.84□□□□□ -1.63
CCNL1-220ENST00000478454 ZNF287Q9HBT7 754 aa4.84□□□□□ -1.63
CCNL1-220ENST00000478454 KIAA1586Q9HCI6 787 aa4.84□□□□□ -1.63
CCNL1-220ENST00000478454 AFF4Q9UHB7 1163 aaKnown RBP4.84□□□□□ -1.63
CCNL1-220ENST00000478454 SERTAD3Q9UJW9 196 aa4.84□□□□□ -1.63
CCNL1-220ENST00000478454 NDRG4Q9ULP0 352 aaKnown RBP4.84□□□□□ -1.63
CCNL1-220ENST00000478454 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.84□□□□□ -1.63
CCNL1-220ENST00000478454 PYCARD-AS1I3L0S3 204 aa4.83□□□□□ -1.64
CCNL1-220ENST00000478454 MYO1CO00159 1063 aa4.83□□□□□ -1.64
CCNL1-220ENST00000478454 MPPED1O15442 326 aa4.83□□□□□ -1.64
CCNL1-220ENST00000478454 MGEA5O60502 916 aa4.83□□□□□ -1.64
CCNL1-220ENST00000478454 PQBP1O60828 265 aaKnown RBP4.83□□□□□ -1.64
CCNL1-220ENST00000478454 IL1R1P14778 569 aa4.83□□□□□ -1.64
CCNL1-220ENST00000478454 ZKSCAN1P17029 563 aaPredicted RBP4.83□□□□□ -1.64
CCNL1-220ENST00000478454 HMGA2P52926 109 aa4.83□□□□□ -1.64
CCNL1-220ENST00000478454 WNT3P56703 355 aa4.83□□□□□ -1.64
CCNL1-220ENST00000478454 TBX4P57082 545 aa4.83□□□□□ -1.64
CCNL1-220ENST00000478454 SIM1P81133 766 aaPredicted RBP4.83□□□□□ -1.64
CCNL1-220ENST00000478454 MYO1EQ12965 1108 aa4.83□□□□□ -1.64
CCNL1-220ENST00000478454 TXNRD1Q16881 649 aa4.83□□□□□ -1.64
CCNL1-220ENST00000478454 HSP90AB2PQ58FF8 381 aa4.83□□□□□ -1.64
CCNL1-220ENST00000478454 RGS7BPQ6MZT1 257 aaPredicted RBP4.83□□□□□ -1.64
CCNL1-220ENST00000478454 LAYNQ6UX15 382 aa4.83□□□□□ -1.64
CCNL1-220ENST00000478454 GAS2L3Q86XJ1 694 aa4.83□□□□□ -1.64
CCNL1-220ENST00000478454 KRT78Q8N1N4 520 aa4.83□□□□□ -1.64
CCNL1-220ENST00000478454 B3GALNT2Q8NCR0 500 aa4.83□□□□□ -1.64
CCNL1-220ENST00000478454 RFKQ969G6 155 aa4.83□□□□□ -1.64
CCNL1-220ENST00000478454 TTC17Q96AE7 1141 aa4.83□□□□□ -1.64
CCNL1-220ENST00000478454 PDLIM2Q96JY6 352 aa4.83□□□□□ -1.64
CCNL1-220ENST00000478454 PTDSS2Q9BVG9 487 aa4.83□□□□□ -1.64
CCNL1-220ENST00000478454 NAA15Q9BXJ9 866 aaKnown RBP4.83□□□□□ -1.64
CCNL1-220ENST00000478454 PRDM13Q9H4Q3 707 aa4.83□□□□□ -1.64
CCNL1-220ENST00000478454 A1CFQ9NQ94 594 aaKnown RBP4.83□□□□□ -1.64
CCNL1-220ENST00000478454 OGDHLQ9ULD0 1010 aa4.83□□□□□ -1.64
CCNL1-220ENST00000478454 DMTF1Q9Y222 760 aa4.83□□□□□ -1.64
CCNL1-220ENST00000478454 KCNA3P22001 575 aa4.82□□□□□ -1.64
CCNL1-220ENST00000478454 PCSK6P29122 969 aa4.82□□□□□ -1.64
CCNL1-220ENST00000478454 PTH2RP49190 550 aa4.82□□□□□ -1.64
CCNL1-220ENST00000478454 CLK3P49761 638 aaKnown RBP4.82□□□□□ -1.64
CCNL1-220ENST00000478454 MRPS35P82673 323 aaKnown RBP4.82□□□□□ -1.64
CCNL1-220ENST00000478454 HTRA4P83105 476 aaPredicted RBP4.82□□□□□ -1.64
CCNL1-220ENST00000478454 ITIH3Q06033 890 aa4.82□□□□□ -1.64
CCNL1-220ENST00000478454 EIF2B5Q13144 721 aaKnown RBP4.82□□□□□ -1.64
CCNL1-220ENST00000478454 RAB32Q13637 225 aa4.82□□□□□ -1.64
CCNL1-220ENST00000478454 PTPRRQ15256 657 aa4.82□□□□□ -1.64
CCNL1-220ENST00000478454 PTCHD3Q3KNS1 767 aa4.82□□□□□ -1.64
CCNL1-220ENST00000478454 KRTAP15-1Q3LI76 137 aa4.82□□□□□ -1.64
CCNL1-220ENST00000478454 ZNF362Q5T0B9 420 aaPredicted RBP4.82□□□□□ -1.64
CCNL1-220ENST00000478454 KAZNQ674X7 775 aa4.82□□□□□ -1.64
CCNL1-220ENST00000478454 KSR2Q6VAB6 950 aa4.82□□□□□ -1.64
CCNL1-220ENST00000478454 MAVSQ7Z434 540 aa4.82□□□□□ -1.64
CCNL1-220ENST00000478454 KCTD20Q7Z5Y7 419 aa4.82□□□□□ -1.64
CCNL1-220ENST00000478454 PEG10Q86TG7 708 aaKnown RBP4.82□□□□□ -1.64
CCNL1-220ENST00000478454 PJA1Q8NG27 643 aa4.82□□□□□ -1.64
CCNL1-220ENST00000478454 ACTRT2Q8TDY3 377 aa4.82□□□□□ -1.64
CCNL1-220ENST00000478454 PHKBQ93100 1093 aa4.82□□□□□ -1.64
CCNL1-220ENST00000478454 PGBD1Q96JS3 809 aa4.82□□□□□ -1.64
CCNL1-220ENST00000478454 KRTAP4-5Q9BYR2 181 aa4.82□□□□□ -1.64
CCNL1-220ENST00000478454 AS3MTQ9HBK9 375 aa4.82□□□□□ -1.64
CCNL1-220ENST00000478454 ARNT2Q9HBZ2 717 aa4.82□□□□□ -1.64
CCNL1-220ENST00000478454 KLC4Q9NSK0 619 aa4.82□□□□□ -1.64
CCNL1-220ENST00000478454 GEMIN8Q9NWZ8 242 aaKnown RBP4.82□□□□□ -1.64
CCNL1-220ENST00000478454 CORO2BQ9UQ03 480 aa4.82□□□□□ -1.64
CCNL1-220ENST00000478454 SHOC2Q9UQ13 582 aa4.82□□□□□ -1.64
CCNL1-220ENST00000478454 COL11A2P13942 1736 aaPredicted RBP4.81□□□□□ -1.64
CCNL1-220ENST00000478454 WDR33Q9C0J8 1336 aaKnown RBP4.81□□□□□ -1.64
CCNL1-220ENST00000478454 PMM2O15305 246 aa4.81□□□□□ -1.64
CCNL1-220ENST00000478454 PRC1O43663 620 aa4.81□□□□□ -1.64
CCNL1-220ENST00000478454 CYP2C9P11712 490 aa4.81□□□□□ -1.64
CCNL1-220ENST00000478454 ADORA2AP29274 412 aa4.81□□□□□ -1.64
CCNL1-220ENST00000478454 PPIFP30405 207 aaKnown RBP4.81□□□□□ -1.64
CCNL1-220ENST00000478454 LIPAP38571 399 aa4.81□□□□□ -1.64
CCNL1-220ENST00000478454 DGKEP52429 567 aa4.81□□□□□ -1.64
CCNL1-220ENST00000478454 NXPH1P58417 271 aa4.81□□□□□ -1.64
CCNL1-220ENST00000478454 PURAQ00577 322 aaKnown RBP4.81□□□□□ -1.64
CCNL1-220ENST00000478454 SAFBQ15424 915 aaKnown RBP eCLIP4.81□□□□□ -1.64
CCNL1-220ENST00000478454 ICE2Q659A1 982 aa4.81□□□□□ -1.64
CCNL1-220ENST00000478454 ATG4AQ8WYN0 398 aa4.81□□□□□ -1.64
CCNL1-220ENST00000478454 FKBP10Q96AY3 582 aa4.81□□□□□ -1.64
CCNL1-220ENST00000478454 MSLNLQ96KJ4 702 aa4.81□□□□□ -1.64
CCNL1-220ENST00000478454 MOGAT1Q96PD6 335 aa4.81□□□□□ -1.64
CCNL1-220ENST00000478454 NELL2Q99435 816 aa4.81□□□□□ -1.64
CCNL1-220ENST00000478454 STK31Q9BXU1 1019 aa4.81□□□□□ -1.64
CCNL1-220ENST00000478454 BTBD1Q9H0C5 482 aa4.81□□□□□ -1.64
CCNL1-220ENST00000478454 NUP62CLQ9H1M0 184 aa4.81□□□□□ -1.64
CCNL1-220ENST00000478454 CHST8Q9H2A9 424 aa4.81□□□□□ -1.64
CCNL1-220ENST00000478454 LINC00473A8K010 186 aa4.8□□□□□ -1.64
CCNL1-220ENST00000478454 H7C4K7 107 aa4.8□□□□□ -1.64
CCNL1-220ENST00000478454 KPNA5O15131 536 aa4.8□□□□□ -1.64
CCNL1-220ENST00000478454 RHOBTB3O94955 611 aa4.8□□□□□ -1.64
CCNL1-220ENST00000478454 JUPP14923 745 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms