RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 TTC39CQ8N584 583 aa3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 ESX1Q8N693 406 aa3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 STPG3Q8N7X2 389 aa3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 UBR7Q8N806 425 aa3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 MARCH10Q8NA82 808 aaPredicted RBP3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 PCYOX1LQ8NBM8 494 aa3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 SMC1BQ8NDV3 1235 aa3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 WDR48Q8TAF3 677 aa3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 ADAMTS17Q8TE56 1095 aa3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 ZCCHC14Q8WYQ9 949 aaKnown RBP3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 CCT6BQ92526 530 aa3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 ANKRD7Q92527 254 aa3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 CDKL2Q92772 493 aa3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 USP13Q92995 863 aaPredicted RBP3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 HPS3Q969F9 1004 aa3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 MTMR8Q96EF0 704 aa3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 UBXN10Q96LJ8 280 aa3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 NT5C1BQ96P26 610 aa3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 KCNC2Q96PR1 638 aa3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 FAM193BQ96PV7 902 aaPredicted RBP3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 SMAD5Q99717 465 aaKnown RBP3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 BARD1Q99728 777 aaKnown RBP3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 SH3GL3Q99963 347 aa3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 DESI2Q9BSY9 194 aa3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 SLC26A6Q9BXS9 759 aa3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 WDR12Q9GZL7 423 aaKnown RBP3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 STMN4Q9H169 189 aaPredicted RBP3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 WNT5BQ9H1J7 359 aa3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 SMARCAD1Q9H4L7 1026 aa3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 ZCCHC4Q9H5U6 513 aa3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 RSAD1Q9HA92 442 aa3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 PARVGQ9HBI0 331 aa3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 SERINC1Q9NRX5 453 aa3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 KCND1Q9NSA2 647 aa3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 GALNT8Q9NY28 637 aa3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 AATFQ9NY61 560 aaKnown RBP eCLIP3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 CALCOCO1Q9P1Z2 691 aa3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 FTSJ1Q9UET6 329 aa3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 TEKT2Q9UIF3 430 aa3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 RCAN3Q9UKA8 241 aa3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 HPCAL4Q9UM19 191 aa3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 GPR34Q9UPC5 381 aa3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 CRYL1Q9Y2S2 319 aa3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 CHTOPQ9Y3Y2 248 aaKnown RBP3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 SPO11Q9Y5K1 396 aa3.82□□□□□ -1.8
FNDC3B-209ENST00000478016 UGGT2Q9NYU1 1516 aa3.81□□□□□ -1.8
FNDC3B-209ENST00000478016 A0A0B4J269 797 aa3.81□□□□□ -1.8
FNDC3B-209ENST00000478016 PRAMEF22A3QJZ6 481 aa3.81□□□□□ -1.8
FNDC3B-209ENST00000478016 C9orf118A6NHY6 69 aa3.81□□□□□ -1.8
FNDC3B-209ENST00000478016 UBXN8O00124 270 aa3.81□□□□□ -1.8
FNDC3B-209ENST00000478016 TTI1O43156 1089 aa3.81□□□□□ -1.8
FNDC3B-209ENST00000478016 AHCYL1O43865 530 aa3.81□□□□□ -1.8
FNDC3B-209ENST00000478016 ENDOD1O94919 500 aa3.81□□□□□ -1.8
FNDC3B-209ENST00000478016 MPIG6BO95866 241 aa3.81□□□□□ -1.8
FNDC3B-209ENST00000478016 IL18BPO95998 194 aa3.81□□□□□ -1.8
FNDC3B-209ENST00000478016 PLATP00750 562 aa3.81□□□□□ -1.8
FNDC3B-209ENST00000478016 KNG1P01042 644 aa3.81□□□□□ -1.8
FNDC3B-209ENST00000478016 CYP1A1P04798 512 aaPredicted RBP3.81□□□□□ -1.8
FNDC3B-209ENST00000478016 PYGLP06737 847 aa3.81□□□□□ -1.8
FNDC3B-209ENST00000478016 AKR1B1P15121 316 aa3.81□□□□□ -1.8
FNDC3B-209ENST00000478016 PDGFRAP16234 1089 aa3.81□□□□□ -1.8
FNDC3B-209ENST00000478016 PRLRP16471 622 aa3.81□□□□□ -1.8
FNDC3B-209ENST00000478016 SLC9A1P19634 815 aa3.81□□□□□ -1.8
FNDC3B-209ENST00000478016 PRKAR1BP31321 381 aa3.81□□□□□ -1.8
FNDC3B-209ENST00000478016 KPNA1P52294 538 aaPredicted RBP3.81□□□□□ -1.8
FNDC3B-209ENST00000478016 SLC12A2P55011 1212 aa3.81□□□□□ -1.8
FNDC3B-209ENST00000478016 HDAC4P56524 1084 aa3.81□□□□□ -1.8
FNDC3B-209ENST00000478016 POLR2FP61218 127 aaKnown RBP3.81□□□□□ -1.8
FNDC3B-209ENST00000478016 DCAF7P61962 342 aa3.81□□□□□ -1.8
FNDC3B-209ENST00000478016 TUBA1BP68363 451 aa3.81□□□□□ -1.8
FNDC3B-209ENST00000478016 UBXN1Q04323 297 aa3.81□□□□□ -1.8
FNDC3B-209ENST00000478016 ZBTB16Q05516 673 aa3.81□□□□□ -1.8
FNDC3B-209ENST00000478016 ITIH3Q06033 890 aa3.81□□□□□ -1.8
FNDC3B-209ENST00000478016 ADCY1Q08828 1119 aa3.81□□□□□ -1.8
FNDC3B-209ENST00000478016 KIF5AQ12840 1032 aa3.81□□□□□ -1.8
FNDC3B-209ENST00000478016 SPARCL1Q14515 664 aa3.81□□□□□ -1.8
FNDC3B-209ENST00000478016 PPA1Q15181 289 aa3.81□□□□□ -1.8
FNDC3B-209ENST00000478016 RCN1Q15293 331 aa3.81□□□□□ -1.8
FNDC3B-209ENST00000478016 DHCR24Q15392 516 aa3.81□□□□□ -1.8
FNDC3B-209ENST00000478016 GEN1Q17RS7 908 aa3.81□□□□□ -1.8
FNDC3B-209ENST00000478016 TMEM240Q5SV17 173 aa3.81□□□□□ -1.8
FNDC3B-209ENST00000478016 C11orf88Q6PI97 169 aa3.81□□□□□ -1.8
FNDC3B-209ENST00000478016 GBP6Q6ZN66 633 aa3.81□□□□□ -1.8
FNDC3B-209ENST00000478016 TUBA1AQ71U36 451 aa3.81□□□□□ -1.8
FNDC3B-209ENST00000478016 CXXC5Q7LFL8 322 aaKnown RBP3.81□□□□□ -1.8
FNDC3B-209ENST00000478016 BNIPLQ7Z465 357 aa3.81□□□□□ -1.8
FNDC3B-209ENST00000478016 KDELC2Q7Z4H8 507 aa3.81□□□□□ -1.8
FNDC3B-209ENST00000478016 GALNTL5Q7Z4T8 443 aa3.81□□□□□ -1.8
FNDC3B-209ENST00000478016 STRA8Q7Z7C7 330 aa3.81□□□□□ -1.8
FNDC3B-209ENST00000478016 FAM124AQ86V42 546 aa3.81□□□□□ -1.8
FNDC3B-209ENST00000478016 TPH2Q8IWU9 490 aa3.81□□□□□ -1.8
FNDC3B-209ENST00000478016 ZZZ3Q8IYH5 903 aa3.81□□□□□ -1.8
FNDC3B-209ENST00000478016 MAML2Q8IZL2 1156 aaPredicted RBP3.81□□□□□ -1.8
FNDC3B-209ENST00000478016 TRIML2Q8N7C3 387 aa3.81□□□□□ -1.8
FNDC3B-209ENST00000478016 EFHBQ8N7U6 833 aa3.81□□□□□ -1.8
FNDC3B-209ENST00000478016 GBP7Q8N8V2 638 aaPredicted RBP3.81□□□□□ -1.8
FNDC3B-209ENST00000478016 ANKRD53Q8N9V6 530 aa3.81□□□□□ -1.8
FNDC3B-209ENST00000478016 ATP11CQ8NB49 1132 aa3.81□□□□□ -1.8
FNDC3B-209ENST00000478016 TXNDC5Q8NBS9 432 aaKnown RBP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms