RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 CFAP47Q6ZTR5 3102 aa7.19□□□□□ -1.26
RTFDC1-206ENST00000477485 PLXND1Q9Y4D7 1925 aa7.19□□□□□ -1.26
RTFDC1-206ENST00000477485 BCLAF3A2AJT9 711 aaKnown RBP7.19□□□□□ -1.26
RTFDC1-206ENST00000477485 KPNA7A9QM74 516 aa7.19□□□□□ -1.26
RTFDC1-206ENST00000477485 PATE3B3GLJ2 98 aa7.19□□□□□ -1.26
RTFDC1-206ENST00000477485 TISP43B9A030 160 aa7.19□□□□□ -1.26
RTFDC1-206ENST00000477485 H3BQV1 296 aa7.19□□□□□ -1.26
RTFDC1-206ENST00000477485 PIRO00625 290 aa7.19□□□□□ -1.26
RTFDC1-206ENST00000477485 TRAK2O60296 914 aa7.19□□□□□ -1.26
RTFDC1-206ENST00000477485 HUS1O60921 280 aa7.19□□□□□ -1.26
RTFDC1-206ENST00000477485 TOP3BO95985 862 aaKnown RBP7.19□□□□□ -1.26
RTFDC1-206ENST00000477485 F11P03951 625 aa7.19□□□□□ -1.26
RTFDC1-206ENST00000477485 CYP11A1P05108 521 aa7.19□□□□□ -1.26
RTFDC1-206ENST00000477485 NEFLP07196 543 aa7.19□□□□□ -1.26
RTFDC1-206ENST00000477485 KRT19P08727 400 aa7.19□□□□□ -1.26
RTFDC1-206ENST00000477485 USP17L7P0C7H9 530 aa7.19□□□□□ -1.26
RTFDC1-206ENST00000477485 PAX3P23760 479 aa7.19□□□□□ -1.26
RTFDC1-206ENST00000477485 ACAT1P24752 427 aaKnown RBP7.19□□□□□ -1.26
RTFDC1-206ENST00000477485 CYP2F1P24903 491 aa7.19□□□□□ -1.26
RTFDC1-206ENST00000477485 WEE1P30291 646 aa7.19□□□□□ -1.26
RTFDC1-206ENST00000477485 RPL10AP62906 217 aaKnown RBP7.19□□□□□ -1.26
RTFDC1-206ENST00000477485 TFAMQ00059 246 aaKnown RBP7.19□□□□□ -1.26
RTFDC1-206ENST00000477485 MYL7Q01449 175 aa7.19□□□□□ -1.26
RTFDC1-206ENST00000477485 ZC2HC1CQ53FD0 456 aaPredicted RBP7.19□□□□□ -1.26
RTFDC1-206ENST00000477485 SYT13Q7L8C5 426 aa7.19□□□□□ -1.26
RTFDC1-206ENST00000477485 TMEM150AQ86TG1 271 aa7.19□□□□□ -1.26
RTFDC1-206ENST00000477485 MON1AQ86VX9 555 aa7.19□□□□□ -1.26
RTFDC1-206ENST00000477485 SPATA2LQ8IUW3 424 aaPredicted RBP7.19□□□□□ -1.26
RTFDC1-206ENST00000477485 PGBD3Q8N328 593 aa7.19□□□□□ -1.26
RTFDC1-206ENST00000477485 CCDC33Q8N5R6 958 aa7.19□□□□□ -1.26
RTFDC1-206ENST00000477485 ARL14EPQ8N8R7 260 aaPredicted RBP7.19□□□□□ -1.26
RTFDC1-206ENST00000477485 FSIP1Q8NA03 581 aa7.19□□□□□ -1.26
RTFDC1-206ENST00000477485 SPRYD3Q8NCJ5 442 aa7.19□□□□□ -1.26
RTFDC1-206ENST00000477485 DEFB124Q8NES8 71 aa7.19□□□□□ -1.26
RTFDC1-206ENST00000477485 RIN3Q8TB24 985 aa7.19□□□□□ -1.26
RTFDC1-206ENST00000477485 OSCP1Q8WVF1 389 aa7.19□□□□□ -1.26
RTFDC1-206ENST00000477485 ZCCHC14Q8WYQ9 949 aaKnown RBP7.19□□□□□ -1.26
RTFDC1-206ENST00000477485 POMGNT1Q8WZA1 660 aa7.19□□□□□ -1.26
RTFDC1-206ENST00000477485 TSPAN18Q96SJ8 248 aa7.19□□□□□ -1.26
RTFDC1-206ENST00000477485 CYP2S1Q96SQ9 504 aa7.19□□□□□ -1.26
RTFDC1-206ENST00000477485 ECT2Q9H8V3 914 aa7.19□□□□□ -1.26
RTFDC1-206ENST00000477485 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.19□□□□□ -1.26
RTFDC1-206ENST00000477485 TMLHEQ9NVH6 421 aa7.19□□□□□ -1.26
RTFDC1-206ENST00000477485 DDX43Q9NXZ2 648 aaKnown RBP7.19□□□□□ -1.26
RTFDC1-206ENST00000477485 CPSF3Q9UKF6 684 aaKnown RBP7.19□□□□□ -1.26
RTFDC1-206ENST00000477485 AGO2Q9UKV8 859 aaKnown RBP7.19□□□□□ -1.26
RTFDC1-206ENST00000477485 ODF2LQ9ULJ1 636 aa7.19□□□□□ -1.26
RTFDC1-206ENST00000477485 R3HCC1Q9Y3T6 440 aaKnown RBP7.19□□□□□ -1.26
RTFDC1-206ENST00000477485 ATXN2Q99700 1313 aaKnown RBP7.19□□□□□ -1.26
RTFDC1-206ENST00000477485 FRYQ5TBA9 3013 aa7.19□□□□□ -1.26
RTFDC1-206ENST00000477485 ASCC3Q8N3C0 2202 aaKnown RBP7.19□□□□□ -1.26
RTFDC1-206ENST00000477485 IGF2RP11717 2491 aa7.18□□□□□ -1.26
RTFDC1-206ENST00000477485 A0A0B4J269 797 aa7.18□□□□□ -1.26
RTFDC1-206ENST00000477485 ANO9A1A5B4 782 aa7.18□□□□□ -1.26
RTFDC1-206ENST00000477485 ANKRD63C9JTQ0 380 aa7.18□□□□□ -1.26
RTFDC1-206ENST00000477485 SCAMP3O14828 347 aaKnown RBP7.18□□□□□ -1.26
RTFDC1-206ENST00000477485 FAM189A1O60320 539 aa7.18□□□□□ -1.26
RTFDC1-206ENST00000477485 ALDH1A2O94788 518 aa7.18□□□□□ -1.26
RTFDC1-206ENST00000477485 CLSTN1O94985 981 aa7.18□□□□□ -1.26
RTFDC1-206ENST00000477485 ABL1P00519 1130 aa7.18□□□□□ -1.26
RTFDC1-206ENST00000477485 ITGB3P05106 788 aa7.18□□□□□ -1.26
RTFDC1-206ENST00000477485 CFIP05156 583 aa7.18□□□□□ -1.26
RTFDC1-206ENST00000477485 HMGA1P17096 107 aaKnown RBP7.18□□□□□ -1.26
RTFDC1-206ENST00000477485 BCKDHBP21953 392 aa7.18□□□□□ -1.26
RTFDC1-206ENST00000477485 POLR2BP30876 1174 aaKnown RBP7.18□□□□□ -1.26
RTFDC1-206ENST00000477485 UBA7P41226 1012 aa7.18□□□□□ -1.26
RTFDC1-206ENST00000477485 ATXN3P54252 364 aaPredicted RBP7.18□□□□□ -1.26
RTFDC1-206ENST00000477485 ATP2C1P98194 919 aaPredicted RBP7.18□□□□□ -1.26
RTFDC1-206ENST00000477485 FAM160A1Q05DH4 1040 aa7.18□□□□□ -1.26
RTFDC1-206ENST00000477485 SMARCB1Q12824 385 aa7.18□□□□□ -1.26
RTFDC1-206ENST00000477485 IFRD2Q12894 506 aaPredicted RBP7.18□□□□□ -1.26
RTFDC1-206ENST00000477485 MCM6Q14566 821 aa7.18□□□□□ -1.26
RTFDC1-206ENST00000477485 NFE2Q16621 373 aaPredicted RBP7.18□□□□□ -1.26
RTFDC1-206ENST00000477485 RILPL1Q5EBL4 403 aa7.18□□□□□ -1.26
RTFDC1-206ENST00000477485 TRIM61Q5EBN2 209 aa7.18□□□□□ -1.26
RTFDC1-206ENST00000477485 ARSHQ5FYA8 562 aa7.18□□□□□ -1.26
RTFDC1-206ENST00000477485 PMS2CLQ68D20 193 aa7.18□□□□□ -1.26
RTFDC1-206ENST00000477485 SLC39A4Q6P5W5 647 aa7.18□□□□□ -1.26
RTFDC1-206ENST00000477485 C11orf74Q86VG3 221 aa7.18□□□□□ -1.26
RTFDC1-206ENST00000477485 EFCAB13Q8IY85 973 aa7.18□□□□□ -1.26
RTFDC1-206ENST00000477485 SH3RF2Q8TEC5 729 aa7.18□□□□□ -1.26
RTFDC1-206ENST00000477485 SPACA7Q96KW9 195 aa7.18□□□□□ -1.26
RTFDC1-206ENST00000477485 ZSCAN31Q96LW9 406 aaPredicted RBP7.18□□□□□ -1.26
RTFDC1-206ENST00000477485 SCNM1Q9BWG6 230 aa7.18□□□□□ -1.26
RTFDC1-206ENST00000477485 GTPBP2Q9BX10 602 aaKnown RBP7.18□□□□□ -1.26
RTFDC1-206ENST00000477485 NUSAP1Q9BXS6 441 aaKnown RBP7.18□□□□□ -1.26
RTFDC1-206ENST00000477485 SLC32A1Q9H598 525 aa7.18□□□□□ -1.26
RTFDC1-206ENST00000477485 ASB7Q9H672 318 aa7.18□□□□□ -1.26
RTFDC1-206ENST00000477485 GTF3C4Q9UKN8 822 aa7.18□□□□□ -1.26
RTFDC1-206ENST00000477485 AGAP1Q9UPQ3 857 aa7.18□□□□□ -1.26
RTFDC1-206ENST00000477485 DERAQ9Y315 318 aa7.18□□□□□ -1.26
RTFDC1-206ENST00000477485 KIF3AQ9Y496 699 aa7.18□□□□□ -1.26
RTFDC1-206ENST00000477485 LAMA1P25391 3075 aa7.17□□□□□ -1.26
RTFDC1-206ENST00000477485 MYO18AQ92614 2054 aaKnown RBP7.17□□□□□ -1.26
RTFDC1-206ENST00000477485 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.17□□□□□ -1.26
RTFDC1-206ENST00000477485 C2orf78A6NCI8 922 aa7.17□□□□□ -1.26
RTFDC1-206ENST00000477485 HYAL3O43820 417 aaPredicted RBP7.17□□□□□ -1.26
RTFDC1-206ENST00000477485 EIF5BO60841 1220 aaKnown RBP7.17□□□□□ -1.26
RTFDC1-206ENST00000477485 TADA3O75528 432 aa7.17□□□□□ -1.26
RTFDC1-206ENST00000477485 IL18RAPO95256 599 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms