RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 OBP2AQ9NY56 170 aa13.18□□□□□ -0.3
CLCNKA-205ENST00000477360 DUSP12Q9UNI6 340 aa13.18□□□□□ -0.3
CLCNKA-205ENST00000477360 SLC27A5Q9Y2P5 690 aa13.18□□□□□ -0.3
CLCNKA-205ENST00000477360 SRFP11831 508 aa13.17□□□□□ -0.3
CLCNKA-205ENST00000477360 ACAT1P24752 427 aaKnown RBP13.17□□□□□ -0.3
CLCNKA-205ENST00000477360 NTHL1P78549 312 aa13.17□□□□□ -0.3
CLCNKA-205ENST00000477360 TAF12Q16514 161 aa13.17□□□□□ -0.3
CLCNKA-205ENST00000477360 TCERG1LQ5VWI1 586 aa13.17□□□□□ -0.3
CLCNKA-205ENST00000477360 ISM2Q6H9L7 571 aa13.17□□□□□ -0.3
CLCNKA-205ENST00000477360 KLHL10Q6JEL2 608 aa13.17□□□□□ -0.3
CLCNKA-205ENST00000477360 TTC9BQ8N6N2 239 aa13.17□□□□□ -0.3
CLCNKA-205ENST00000477360 KIAA1958Q8N8K9 716 aa13.17□□□□□ -0.3
CLCNKA-205ENST00000477360 SMARCD2Q92925 531 aa13.17□□□□□ -0.3
CLCNKA-205ENST00000477360 JAKMIP2Q96AA8 810 aa13.17□□□□□ -0.3
CLCNKA-205ENST00000477360 ELSPBP1Q96BH3 223 aa13.17□□□□□ -0.3
CLCNKA-205ENST00000477360 PCED1BQ96HM7 432 aa13.17□□□□□ -0.3
CLCNKA-205ENST00000477360 FAM81BQ96LP2 452 aa13.17□□□□□ -0.3
CLCNKA-205ENST00000477360 GCNAQ96QF7 691 aa13.17□□□□□ -0.3
CLCNKA-205ENST00000477360 EPHX3Q9H6B9 360 aa13.17□□□□□ -0.3
CLCNKA-205ENST00000477360 COMMD8Q9NX08 183 aa13.17□□□□□ -0.3
CLCNKA-205ENST00000477360 WNT16Q9UBV4 365 aa13.17□□□□□ -0.3
CLCNKA-205ENST00000477360 CTNND2Q9UQB3 1225 aa13.17□□□□□ -0.3
CLCNKA-205ENST00000477360 ARIH1Q9Y4X5 557 aaPredicted RBP13.17□□□□□ -0.3
CLCNKA-205ENST00000477360 NCANO14594 1321 aa13.16□□□□□ -0.3
CLCNKA-205ENST00000477360 C5orf42Q9H799 3197 aa13.16□□□□□ -0.3
CLCNKA-205ENST00000477360 MOSPD3O75425 235 aa13.16□□□□□ -0.3
CLCNKA-205ENST00000477360 HMGA1P17096 107 aaKnown RBP13.16□□□□□ -0.3
CLCNKA-205ENST00000477360 TBXAS1P24557 533 aaPredicted RBP13.16□□□□□ -0.3
CLCNKA-205ENST00000477360 CYP2F1P24903 491 aa13.16□□□□□ -0.3
CLCNKA-205ENST00000477360 CCR2P41597 374 aa13.16□□□□□ -0.3
CLCNKA-205ENST00000477360 FMO5P49326 533 aa13.16□□□□□ -0.3
CLCNKA-205ENST00000477360 PDE6CP51160 858 aa13.16□□□□□ -0.3
CLCNKA-205ENST00000477360 NUBP1P53384 320 aa13.16□□□□□ -0.3
CLCNKA-205ENST00000477360 MLLT6P55198 1093 aaPredicted RBP13.16□□□□□ -0.3
CLCNKA-205ENST00000477360 NLRP12P59046 1061 aa13.16□□□□□ -0.3
CLCNKA-205ENST00000477360 YWHAEP62258 255 aaKnown RBP13.16□□□□□ -0.3
CLCNKA-205ENST00000477360 PFKPQ01813 784 aa13.16□□□□□ -0.3
CLCNKA-205ENST00000477360 CCDC40Q4G0X9 1142 aa13.16□□□□□ -0.3
CLCNKA-205ENST00000477360 ARHGAP15Q53QZ3 475 aa13.16□□□□□ -0.3
CLCNKA-205ENST00000477360 DCAF17Q5H9S7 520 aaPredicted RBP13.16□□□□□ -0.3
CLCNKA-205ENST00000477360 FAM114A1Q8IWE2 563 aa13.16□□□□□ -0.3
CLCNKA-205ENST00000477360 SLC44A3Q8N4M1 653 aa13.16□□□□□ -0.3
CLCNKA-205ENST00000477360 SHKBP1Q8TBC3 707 aa13.16□□□□□ -0.3
CLCNKA-205ENST00000477360 FAM200AQ8TCP9 573 aa13.16□□□□□ -0.3
CLCNKA-205ENST00000477360 MYLPFQ96A32 169 aa13.16□□□□□ -0.3
CLCNKA-205ENST00000477360 EEF2KMTQ96G04 330 aa13.16□□□□□ -0.3
CLCNKA-205ENST00000477360 ASB16Q96NS5 453 aa13.16□□□□□ -0.3
CLCNKA-205ENST00000477360 PI4K2AQ9BTU6 479 aa13.16□□□□□ -0.3
CLCNKA-205ENST00000477360 TTLL2Q9BWV7 592 aa13.16□□□□□ -0.3
CLCNKA-205ENST00000477360 NT5C1AQ9BXI3 368 aa13.16□□□□□ -0.3
CLCNKA-205ENST00000477360 KCNH6Q9H252 994 aa13.16□□□□□ -0.3
CLCNKA-205ENST00000477360 THAP9Q9H5L6 903 aa13.16□□□□□ -0.3
CLCNKA-205ENST00000477360 SMYD3Q9H7B4 428 aa13.16□□□□□ -0.3
CLCNKA-205ENST00000477360 PNPLA8Q9NP80 782 aa13.16□□□□□ -0.3
CLCNKA-205ENST00000477360 TRPV5Q9NQA5 729 aa13.16□□□□□ -0.3
CLCNKA-205ENST00000477360 KIAA1257Q9ULG3 409 aa13.16□□□□□ -0.3
CLCNKA-205ENST00000477360 DOCK8Q8NF50 2099 aa13.16□□□□□ -0.3
CLCNKA-205ENST00000477360 GTPBP10A4D1E9 387 aaKnown RBP13.15□□□□□ -0.3
CLCNKA-205ENST00000477360 CILPO75339 1184 aa13.15□□□□□ -0.3
CLCNKA-205ENST00000477360 PDGFRBP09619 1106 aa13.15□□□□□ -0.3
CLCNKA-205ENST00000477360 CEBPBP17676 345 aa13.15□□□□□ -0.3
CLCNKA-205ENST00000477360 ANXA13P27216 316 aa13.15□□□□□ -0.3
CLCNKA-205ENST00000477360 CBWD6Q4V339 395 aa13.15□□□□□ -0.3
CLCNKA-205ENST00000477360 CBWD3Q5JTY5 395 aa13.15□□□□□ -0.3
CLCNKA-205ENST00000477360 CBWD5Q5RIA9 395 aa13.15□□□□□ -0.3
CLCNKA-205ENST00000477360 SASS6Q6UVJ0 657 aa13.15□□□□□ -0.3
CLCNKA-205ENST00000477360 GAREM2Q75VX8 874 aa13.15□□□□□ -0.3
CLCNKA-205ENST00000477360 DEPDC1BQ8WUY9 529 aa13.15□□□□□ -0.3
CLCNKA-205ENST00000477360 OVCA2Q8WZ82 227 aa13.15□□□□□ -0.3
CLCNKA-205ENST00000477360 ASIC4Q96FT7 647 aa13.15□□□□□ -0.3
CLCNKA-205ENST00000477360 SMARCD1Q96GM5 515 aa13.15□□□□□ -0.3
CLCNKA-205ENST00000477360 FUCA2Q9BTY2 467 aa13.15□□□□□ -0.3
CLCNKA-205ENST00000477360 SRRTQ9BXP5 876 aaKnown RBP13.15□□□□□ -0.3
CLCNKA-205ENST00000477360 TASP1Q9H6P5 420 aa13.15□□□□□ -0.3
CLCNKA-205ENST00000477360 IL21Q9HBE4 155 aa13.15□□□□□ -0.3
CLCNKA-205ENST00000477360 APOBEC3GQ9HC16 384 aaKnown RBP13.15□□□□□ -0.3
CLCNKA-205ENST00000477360 ZFP14Q9HCL3 533 aa13.15□□□□□ -0.3
CLCNKA-205ENST00000477360 CSNK1G1Q9HCP0 422 aa13.15□□□□□ -0.3
CLCNKA-205ENST00000477360 C11orf16Q9NQ32 467 aa13.15□□□□□ -0.3
CLCNKA-205ENST00000477360 NME7Q9Y5B8 376 aa13.15□□□□□ -0.3
CLCNKA-205ENST00000477360 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.15□□□□□ -0.3
CLCNKA-205ENST00000477360 NUMBLQ9Y6R0 609 aa13.15□□□□□ -0.3
CLCNKA-205ENST00000477360 NOTCH4Q99466 2003 aa13.15□□□□□ -0.3
CLCNKA-205ENST00000477360 TMEM221A6NGB7 291 aa13.14□□□□□ -0.31
CLCNKA-205ENST00000477360 SLC38A8A6NNN8 435 aa13.14□□□□□ -0.31
CLCNKA-205ENST00000477360 M0R296 226 aa13.14□□□□□ -0.31
CLCNKA-205ENST00000477360 ATP2C2O75185 946 aa13.14□□□□□ -0.31
CLCNKA-205ENST00000477360 RTN3O95197 1032 aaPredicted RBP13.14□□□□□ -0.31
CLCNKA-205ENST00000477360 AFPP02771 609 aaKnown RBP13.14□□□□□ -0.31
CLCNKA-205ENST00000477360 F11P03951 625 aa13.14□□□□□ -0.31
CLCNKA-205ENST00000477360 ASGR2P07307 311 aa13.14□□□□□ -0.31
CLCNKA-205ENST00000477360 MYL4P12829 197 aa13.14□□□□□ -0.31
CLCNKA-205ENST00000477360 SP100P23497 879 aaPredicted RBP13.14□□□□□ -0.31
CLCNKA-205ENST00000477360 GABRR2P28476 465 aa13.14□□□□□ -0.31
CLCNKA-205ENST00000477360 NDST1P52848 882 aa13.14□□□□□ -0.31
CLCNKA-205ENST00000477360 CDH8P55286 799 aa13.14□□□□□ -0.31
CLCNKA-205ENST00000477360 PSMC1P62191 440 aaKnown RBP13.14□□□□□ -0.31
CLCNKA-205ENST00000477360 CYP27A1Q02318 531 aa13.14□□□□□ -0.31
CLCNKA-205ENST00000477360 GCNT1Q02742 428 aa13.14□□□□□ -0.31
CLCNKA-205ENST00000477360 CUL2Q13617 745 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms