RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 HEXIM2Q96MH2 286 aaKnown RBP16.9■□□□□ 0.3
COPS3-207ENST00000477299 OXCT2Q9BYC2 517 aaPredicted RBP16.9■□□□□ 0.3
COPS3-207ENST00000477299 NLRC4Q9NPP4 1024 aa16.9■□□□□ 0.3
COPS3-207ENST00000477299 DENND4CQ5VZ89 1909 aa16.9■□□□□ 0.3
COPS3-207ENST00000477299 CCDC195A0A1B0GUA6 201 aa16.89■□□□□ 0.29
COPS3-207ENST00000477299 NRG2O14511 850 aaPredicted RBP16.89■□□□□ 0.29
COPS3-207ENST00000477299 BEST1O76090 585 aa16.89■□□□□ 0.29
COPS3-207ENST00000477299 HAPLN1P10915 354 aaPredicted RBP16.89■□□□□ 0.29
COPS3-207ENST00000477299 UCHL3P15374 230 aa16.89■□□□□ 0.29
COPS3-207ENST00000477299 ADORA2BP29275 332 aa16.89■□□□□ 0.29
COPS3-207ENST00000477299 USP8P40818 1118 aa16.89■□□□□ 0.29
COPS3-207ENST00000477299 ZNF132P52740 706 aa16.89■□□□□ 0.29
COPS3-207ENST00000477299 POLR2FP61218 127 aaKnown RBP16.89■□□□□ 0.29
COPS3-207ENST00000477299 DRAP1Q14919 205 aaPredicted RBP16.89■□□□□ 0.29
COPS3-207ENST00000477299 DDR2Q16832 855 aa16.89■□□□□ 0.29
COPS3-207ENST00000477299 PPP1R26Q5T8A7 1209 aaPredicted RBP16.89■□□□□ 0.29
COPS3-207ENST00000477299 SPATA2LQ8IUW3 424 aaPredicted RBP16.89■□□□□ 0.29
COPS3-207ENST00000477299 RBBP8NLQ8NC74 664 aaPredicted RBP16.89■□□□□ 0.29
COPS3-207ENST00000477299 SLC2A14Q8TDB8 520 aa16.89■□□□□ 0.29
COPS3-207ENST00000477299 HLA-CQ95604 372 aa16.89■□□□□ 0.29
COPS3-207ENST00000477299 FAXDC2Q96IV6 333 aa16.89■□□□□ 0.29
COPS3-207ENST00000477299 SEPT5Q99719 369 aaPredicted RBP16.89■□□□□ 0.29
COPS3-207ENST00000477299 PLCB1Q9NQ66 1216 aa16.89■□□□□ 0.29
COPS3-207ENST00000477299 HCFC1R1Q9NWW0 138 aa16.89■□□□□ 0.29
COPS3-207ENST00000477299 CEP72Q9P209 647 aa16.89■□□□□ 0.29
COPS3-207ENST00000477299 PCDHB5Q9Y5E4 795 aa16.89■□□□□ 0.29
COPS3-207ENST00000477299 INSL5Q9Y5Q6 135 aa16.89■□□□□ 0.29
COPS3-207ENST00000477299 GRXCR2A6NFK2 248 aa16.88■□□□□ 0.29
COPS3-207ENST00000477299 CFHP08603 1231 aa16.88■□□□□ 0.29
COPS3-207ENST00000477299 KRT5P13647 590 aa16.88■□□□□ 0.29
COPS3-207ENST00000477299 ATF6P18850 670 aa16.88■□□□□ 0.29
COPS3-207ENST00000477299 ELF1P32519 619 aa16.88■□□□□ 0.29
COPS3-207ENST00000477299 PBX1P40424 430 aa16.88■□□□□ 0.29
COPS3-207ENST00000477299 MFAP3P55082 362 aa16.88■□□□□ 0.29
COPS3-207ENST00000477299 NTHL1P78549 312 aa16.88■□□□□ 0.29
COPS3-207ENST00000477299 TWF1Q12792 350 aa16.88■□□□□ 0.29
COPS3-207ENST00000477299 RAPGEF1Q13905 1077 aa16.88■□□□□ 0.29
COPS3-207ENST00000477299 MGAT5BQ3V5L5 792 aa16.88■□□□□ 0.29
COPS3-207ENST00000477299 FILIP1LQ4L180 1135 aa16.88■□□□□ 0.29
COPS3-207ENST00000477299 PPM1LQ5SGD2 360 aa16.88■□□□□ 0.29
COPS3-207ENST00000477299 GIPC2Q8TF65 315 aa16.88■□□□□ 0.29
COPS3-207ENST00000477299 SHC3Q92529 594 aa16.88■□□□□ 0.29
COPS3-207ENST00000477299 CYFIP2Q96F07 1278 aa16.88■□□□□ 0.29
COPS3-207ENST00000477299 KCNK16Q96T55 309 aa16.88■□□□□ 0.29
COPS3-207ENST00000477299 PLEKHA4Q9H4M7 779 aa16.88■□□□□ 0.29
COPS3-207ENST00000477299 CNTN6Q9UQ52 1028 aa16.88■□□□□ 0.29
COPS3-207ENST00000477299 YIPF1Q9Y548 306 aa16.88■□□□□ 0.29
COPS3-207ENST00000477299 OBSL1O75147 1896 aa16.88■□□□□ 0.29
COPS3-207ENST00000477299 C5orf42Q9H799 3197 aa16.87■□□□□ 0.29
COPS3-207ENST00000477299 PATJQ8NI35 1801 aa16.87■□□□□ 0.29
COPS3-207ENST00000477299 SPDYE4A6NLX3 237 aa16.87■□□□□ 0.29
COPS3-207ENST00000477299 CYP26A1O43174 497 aa16.87■□□□□ 0.29
COPS3-207ENST00000477299 NCK2O43639 380 aa16.87■□□□□ 0.29
COPS3-207ENST00000477299 CD19P15391 556 aa16.87■□□□□ 0.29
COPS3-207ENST00000477299 BRD2P25440 801 aaKnown RBP16.87■□□□□ 0.29
COPS3-207ENST00000477299 CLCN1P35523 988 aa16.87■□□□□ 0.29
COPS3-207ENST00000477299 PLCB2Q00722 1185 aa16.87■□□□□ 0.29
COPS3-207ENST00000477299 MTMR3Q13615 1198 aa16.87■□□□□ 0.29
COPS3-207ENST00000477299 NFE2Q16621 373 aaPredicted RBP16.87■□□□□ 0.29
COPS3-207ENST00000477299 LIN9Q5TKA1 542 aa16.87■□□□□ 0.29
COPS3-207ENST00000477299 FAM35AQ86V20 835 aa16.87■□□□□ 0.29
COPS3-207ENST00000477299 SCN4BQ8IWT1 228 aa16.87■□□□□ 0.29
COPS3-207ENST00000477299 HS6ST3Q8IZP7 471 aa16.87■□□□□ 0.29
COPS3-207ENST00000477299 ZMIZ2Q8NF64 920 aa16.87■□□□□ 0.29
COPS3-207ENST00000477299 NEK11Q8NG66 645 aa16.87■□□□□ 0.29
COPS3-207ENST00000477299 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.87■□□□□ 0.29
COPS3-207ENST00000477299 SPPL2BQ8TCT7 592 aa16.87■□□□□ 0.29
COPS3-207ENST00000477299 HDAC7Q8WUI4 952 aa16.87■□□□□ 0.29
COPS3-207ENST00000477299 TNIP3Q96KP6 325 aa16.87■□□□□ 0.29
COPS3-207ENST00000477299 SMOQ99835 787 aa16.87■□□□□ 0.29
COPS3-207ENST00000477299 MED10Q9BTT4 135 aa16.87■□□□□ 0.29
COPS3-207ENST00000477299 PRKD2Q9BZL6 878 aa16.87■□□□□ 0.29
COPS3-207ENST00000477299 ANAPC1Q9H1A4 1944 aa16.87■□□□□ 0.29
COPS3-207ENST00000477299 XIRP2A4UGR9 3374 aa16.86■□□□□ 0.29
COPS3-207ENST00000477299 DENND4AQ7Z401 1863 aa16.86■□□□□ 0.29
COPS3-207ENST00000477299 C1RP00736 705 aa16.86■□□□□ 0.29
COPS3-207ENST00000477299 JAM2P57087 298 aa16.86■□□□□ 0.29
COPS3-207ENST00000477299 YWHAEP62258 255 aaKnown RBP16.86■□□□□ 0.29
COPS3-207ENST00000477299 UVSSAQ2YD98 709 aa16.86■□□□□ 0.29
COPS3-207ENST00000477299 HNRNPABQ99729 332 aaKnown RBP16.86■□□□□ 0.29
COPS3-207ENST00000477299 STK33Q9BYT3 514 aa16.86■□□□□ 0.29
COPS3-207ENST00000477299 SFXN1Q9H9B4 322 aa16.86■□□□□ 0.29
COPS3-207ENST00000477299 DZANK1Q9NVP4 752 aa16.86■□□□□ 0.29
COPS3-207ENST00000477299 DNMT3BQ9UBC3 853 aaKnown RBP16.86■□□□□ 0.29
COPS3-207ENST00000477299 CD207Q9UJ71 328 aa16.86■□□□□ 0.29
COPS3-207ENST00000477299 DOCK8Q8NF50 2099 aa16.85■□□□□ 0.29
COPS3-207ENST00000477299 FAM170AA1A519 330 aa16.85■□□□□ 0.29
COPS3-207ENST00000477299 F8VP50 259 aa16.85■□□□□ 0.29
COPS3-207ENST00000477299 TULP2O00295 520 aa16.85■□□□□ 0.29
COPS3-207ENST00000477299 GRIK1P39086 918 aa16.85■□□□□ 0.29
COPS3-207ENST00000477299 KCNQ1P51787 676 aa16.85■□□□□ 0.29
COPS3-207ENST00000477299 CFAP221Q4G0U5 840 aa16.85■□□□□ 0.29
COPS3-207ENST00000477299 POTEHQ6S545 545 aa16.85■□□□□ 0.29
COPS3-207ENST00000477299 C4orf50Q6ZRC1 276 aa16.85■□□□□ 0.29
COPS3-207ENST00000477299 CCDC149Q6ZUS6 474 aa16.85■□□□□ 0.29
COPS3-207ENST00000477299 ENOSF1Q7L5Y1 443 aa16.85■□□□□ 0.29
COPS3-207ENST00000477299 GRASPQ7Z6J2 395 aaPredicted RBP16.85■□□□□ 0.29
COPS3-207ENST00000477299 GPR149Q86SP6 731 aa16.85■□□□□ 0.29
COPS3-207ENST00000477299 SLC47A2Q86VL8 602 aa16.85■□□□□ 0.29
COPS3-207ENST00000477299 TTC30AQ86WT1 665 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms