RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 TTC1Q99614 292 aa8.81□□□□□ -1
VAPB-205ENST00000476395 ZNF184Q99676 751 aaPredicted RBP8.81□□□□□ -1
VAPB-205ENST00000476395 NTPCRQ9BSD7 190 aaKnown RBP8.81□□□□□ -1
VAPB-205ENST00000476395 FHDC1Q9C0D6 1143 aaPredicted RBP8.81□□□□□ -1
VAPB-205ENST00000476395 EBF3Q9H4W6 596 aa8.81□□□□□ -1
VAPB-205ENST00000476395 TMEM8AQ9HCN3 771 aa8.81□□□□□ -1
VAPB-205ENST00000476395 XPNPEP1Q9NQW7 623 aa8.81□□□□□ -1
VAPB-205ENST00000476395 OCRLQ01968 901 aa8.8□□□□□ -1
VAPB-205ENST00000476395 CENPCQ03188 943 aa8.8□□□□□ -1
VAPB-205ENST00000476395 GAD2Q05329 585 aa8.8□□□□□ -1
VAPB-205ENST00000476395 ZYXQ15942 572 aaKnown RBP8.8□□□□□ -1
VAPB-205ENST00000476395 ATP13A4Q4VNC1 1196 aa8.8□□□□□ -1
VAPB-205ENST00000476395 SEL1L2Q5TEA6 688 aa8.8□□□□□ -1
VAPB-205ENST00000476395 TXNRD3NBQ6F5E7 133 aa8.8□□□□□ -1
VAPB-205ENST00000476395 OTOAQ7RTW8 1153 aa8.8□□□□□ -1
VAPB-205ENST00000476395 CLNKQ7Z7G1 428 aa8.8□□□□□ -1
VAPB-205ENST00000476395 SPATA24Q86W54 205 aa8.8□□□□□ -1
VAPB-205ENST00000476395 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.8□□□□□ -1
VAPB-205ENST00000476395 RAB20Q9NX57 234 aa8.8□□□□□ -1
VAPB-205ENST00000476395 NKIRAS1Q9NYS0 192 aa8.8□□□□□ -1
VAPB-205ENST00000476395 ZNF219Q9P2Y4 722 aaPredicted RBP8.8□□□□□ -1
VAPB-205ENST00000476395 PCDHGB4Q9UN71 923 aa8.8□□□□□ -1
VAPB-205ENST00000476395 PCDHGB5Q9Y5G0 923 aa8.8□□□□□ -1
VAPB-205ENST00000476395 A0A0G2JND7 137 aa8.8□□□□□ -1
VAPB-205ENST00000476395 TCP10L2B9ZVM9 353 aa8.8□□□□□ -1
VAPB-205ENST00000476395 MAGEB2O15479 319 aa8.8□□□□□ -1
VAPB-205ENST00000476395 ICAM1P05362 532 aa8.8□□□□□ -1
VAPB-205ENST00000476395 GSTA2P09210 222 aa8.8□□□□□ -1
VAPB-205ENST00000476395 RALAP11233 206 aa8.8□□□□□ -1
VAPB-205ENST00000476395 HARSP12081 509 aaKnown RBP8.8□□□□□ -1
VAPB-205ENST00000476395 ETS1P14921 441 aa8.8□□□□□ -1
VAPB-205ENST00000476395 ITIH2P19823 946 aa8.8□□□□□ -1
VAPB-205ENST00000476395 PTPN4P29074 926 aa8.8□□□□□ -1
VAPB-205ENST00000476395 SERPINB3P29508 390 aa8.8□□□□□ -1
VAPB-205ENST00000476395 ACVR2BQ13705 512 aa8.8□□□□□ -1
VAPB-205ENST00000476395 PCNX4Q63HM2 1172 aa8.8□□□□□ -1
VAPB-205ENST00000476395 KRT39Q6A163 491 aa8.8□□□□□ -1
VAPB-205ENST00000476395 SPOPLQ6IQ16 392 aa8.8□□□□□ -1
VAPB-205ENST00000476395 NIPA1Q7RTP0 329 aa8.8□□□□□ -1
VAPB-205ENST00000476395 LCA5Q86VQ0 697 aa8.8□□□□□ -1
VAPB-205ENST00000476395 UBR7Q8N806 425 aa8.8□□□□□ -1
VAPB-205ENST00000476395 MZB1Q8WU39 189 aa8.8□□□□□ -1
VAPB-205ENST00000476395 INPP5DQ92835 1189 aa8.8□□□□□ -1
VAPB-205ENST00000476395 SNF8Q96H20 258 aa8.8□□□□□ -1
VAPB-205ENST00000476395 PARP2Q9UGN5 583 aa8.8□□□□□ -1
VAPB-205ENST00000476395 A0A0J9YVX5 310 aa8.79□□□□□ -1
VAPB-205ENST00000476395 GSC2O15499 205 aa8.79□□□□□ -1
VAPB-205ENST00000476395 THAP12O43422 761 aa8.79□□□□□ -1
VAPB-205ENST00000476395 PARNO95453 639 aaKnown RBP8.79□□□□□ -1
VAPB-205ENST00000476395 BAG2O95816 211 aa8.79□□□□□ -1
VAPB-205ENST00000476395 ITGA2BP08514 1039 aa8.79□□□□□ -1
VAPB-205ENST00000476395 ZSCAN5DPP0CG00 497 aa8.79□□□□□ -1
VAPB-205ENST00000476395 EIF4BP23588 611 aaKnown RBP8.79□□□□□ -1
VAPB-205ENST00000476395 ALDH1B1P30837 517 aa8.79□□□□□ -1
VAPB-205ENST00000476395 SSTR3P32745 418 aaPredicted RBP8.79□□□□□ -1
VAPB-205ENST00000476395 PIK3CAP42336 1068 aa8.79□□□□□ -1
VAPB-205ENST00000476395 RASSF2P50749 326 aa8.79□□□□□ -1
VAPB-205ENST00000476395 TMED1Q13445 227 aa8.79□□□□□ -1
VAPB-205ENST00000476395 PGM5Q15124 567 aa8.79□□□□□ -1
VAPB-205ENST00000476395 SGO2Q562F6 1265 aa8.79□□□□□ -1
VAPB-205ENST00000476395 ZBTB41Q5SVQ8 909 aa8.79□□□□□ -1
VAPB-205ENST00000476395 RAPH1Q70E73 1250 aa8.79□□□□□ -1
VAPB-205ENST00000476395 MIER3Q7Z3K6 550 aa8.79□□□□□ -1
VAPB-205ENST00000476395 C4orf19Q8IY42 314 aa8.79□□□□□ -1
VAPB-205ENST00000476395 SYTL5Q8TDW5 730 aaPredicted RBP8.79□□□□□ -1
VAPB-205ENST00000476395 CCDC127Q96BQ5 260 aa8.79□□□□□ -1
VAPB-205ENST00000476395 TAAR1Q96RJ0 339 aa8.79□□□□□ -1
VAPB-205ENST00000476395 TMEM39BQ9GZU3 492 aa8.79□□□□□ -1
VAPB-205ENST00000476395 ASCC2Q9H1I8 757 aaPredicted RBP8.79□□□□□ -1
VAPB-205ENST00000476395 RETREG1Q9H6L5 497 aa8.79□□□□□ -1
VAPB-205ENST00000476395 ARHGEF38Q9NXL2 777 aa8.79□□□□□ -1
VAPB-205ENST00000476395 MAP3K20Q9NYL2 800 aaKnown RBP8.79□□□□□ -1
VAPB-205ENST00000476395 ASIC3Q9UHC3 531 aa8.79□□□□□ -1
VAPB-205ENST00000476395 HERC5Q9UII4 1024 aaKnown RBP8.79□□□□□ -1
VAPB-205ENST00000476395 ANAPC7Q9UJX3 599 aa8.79□□□□□ -1
VAPB-205ENST00000476395 A0A1W2PPM1 405 aa8.79□□□□□ -1
VAPB-205ENST00000476395 CLRN2A0PK11 232 aa8.79□□□□□ -1
VAPB-205ENST00000476395 TIMM44O43615 452 aa8.79□□□□□ -1
VAPB-205ENST00000476395 ASLP04424 464 aa8.79□□□□□ -1
VAPB-205ENST00000476395 CHRNA5P30532 468 aa8.79□□□□□ -1
VAPB-205ENST00000476395 QARSP47897 775 aaKnown RBP8.79□□□□□ -1
VAPB-205ENST00000476395 OGDHQ02218 1023 aa8.79□□□□□ -1
VAPB-205ENST00000476395 MAMLD1Q13495 774 aa8.79□□□□□ -1
VAPB-205ENST00000476395 MAPK6Q16659 721 aa8.79□□□□□ -1
VAPB-205ENST00000476395 SAPCD2Q86UD0 394 aa8.79□□□□□ -1
VAPB-205ENST00000476395 VPS37AQ8NEZ2 397 aa8.79□□□□□ -1
VAPB-205ENST00000476395 JDP2Q8WYK2 163 aa8.79□□□□□ -1
VAPB-205ENST00000476395 KLF6Q99612 283 aaPredicted RBP8.79□□□□□ -1
VAPB-205ENST00000476395 HEMGNQ9BXL5 484 aa8.79□□□□□ -1
VAPB-205ENST00000476395 AVENQ9NQS1 362 aaPredicted RBP8.79□□□□□ -1
VAPB-205ENST00000476395 ARHGAP28Q9P2N2 729 aa8.79□□□□□ -1
VAPB-205ENST00000476395 PPM1HQ9ULR3 514 aa8.79□□□□□ -1
VAPB-205ENST00000476395 SCAF8Q9UPN6 1271 aaKnown RBP8.79□□□□□ -1
VAPB-205ENST00000476395 C3orf70A6NLC5 250 aaPredicted RBP8.79□□□□□ -1
VAPB-205ENST00000476395 POC1B-GALNT4F8VUJ3 575 aa8.79□□□□□ -1
VAPB-205ENST00000476395 MAP3K7O43318 606 aa8.79□□□□□ -1
VAPB-205ENST00000476395 SPOPO43791 374 aa8.79□□□□□ -1
VAPB-205ENST00000476395 OPHN1O60890 802 aa8.79□□□□□ -1
VAPB-205ENST00000476395 SORBS2O94875 1100 aaKnown RBP8.79□□□□□ -1
VAPB-205ENST00000476395 C4BPAP04003 597 aaKnown RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms