RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 PSMC2P35998 433 aaKnown RBP14.46□□□□□ -0.09
HDAC1-206ENST00000476391 HSPA13P48723 471 aa14.46□□□□□ -0.09
HDAC1-206ENST00000476391 ZBTB17Q13105 803 aa14.46□□□□□ -0.09
HDAC1-206ENST00000476391 KCTD21Q4G0X4 260 aa14.46□□□□□ -0.09
HDAC1-206ENST00000476391 SNRNP48Q6IEG0 339 aaKnown RBP14.46□□□□□ -0.09
HDAC1-206ENST00000476391 ETNPPLQ8TBG4 499 aa14.46□□□□□ -0.09
HDAC1-206ENST00000476391 MZB1Q8WU39 189 aa14.46□□□□□ -0.09
HDAC1-206ENST00000476391 SLC20A1Q8WUM9 679 aa14.46□□□□□ -0.09
HDAC1-206ENST00000476391 SLC5A5Q92911 643 aa14.46□□□□□ -0.09
HDAC1-206ENST00000476391 C7orf26Q96N11 449 aa14.46□□□□□ -0.09
HDAC1-206ENST00000476391 GPATCH1Q9BRR8 931 aaKnown RBP14.46□□□□□ -0.09
HDAC1-206ENST00000476391 HGH1Q9BTY7 390 aa14.46□□□□□ -0.09
HDAC1-206ENST00000476391 DRC3Q9H069 523 aa14.46□□□□□ -0.09
HDAC1-206ENST00000476391 TPK1Q9H3S4 243 aa14.46□□□□□ -0.09
HDAC1-206ENST00000476391 STRIP2Q9ULQ0 834 aa14.46□□□□□ -0.09
HDAC1-206ENST00000476391 KLRF2D3W0D1 207 aa14.45□□□□□ -0.1
HDAC1-206ENST00000476391 FOXN3O00409 490 aaPredicted RBP14.45□□□□□ -0.1
HDAC1-206ENST00000476391 DNALI1O14645 258 aaPredicted RBP14.45□□□□□ -0.1
HDAC1-206ENST00000476391 ATP2A1O14983 1001 aa14.45□□□□□ -0.1
HDAC1-206ENST00000476391 HMOX2P30519 316 aa14.45□□□□□ -0.1
HDAC1-206ENST00000476391 ALDH3B2P48448 385 aa14.45□□□□□ -0.1
HDAC1-206ENST00000476391 TFAP4Q01664 338 aa14.45□□□□□ -0.1
HDAC1-206ENST00000476391 EVX2Q03828 476 aa14.45□□□□□ -0.1
HDAC1-206ENST00000476391 LLGL1Q15334 1064 aa14.45□□□□□ -0.1
HDAC1-206ENST00000476391 ARHGAP44Q17R89 818 aa14.45□□□□□ -0.1
HDAC1-206ENST00000476391 MDH1BQ5I0G3 518 aa14.45□□□□□ -0.1
HDAC1-206ENST00000476391 SPTY2D1Q68D10 685 aaPredicted RBP14.45□□□□□ -0.1
HDAC1-206ENST00000476391 IYDQ6PHW0 289 aa14.45□□□□□ -0.1
HDAC1-206ENST00000476391 KBTBD6Q86V97 674 aa14.45□□□□□ -0.1
HDAC1-206ENST00000476391 CPNE8Q86YQ8 564 aa14.45□□□□□ -0.1
HDAC1-206ENST00000476391 SAMD3Q8N6K7 520 aa14.45□□□□□ -0.1
HDAC1-206ENST00000476391 DDHD1Q8NEL9 900 aa14.45□□□□□ -0.1
HDAC1-206ENST00000476391 CNBD2Q96M20 576 aa14.45□□□□□ -0.1
HDAC1-206ENST00000476391 DHRS4Q9BTZ2 278 aa14.45□□□□□ -0.1
HDAC1-206ENST00000476391 INTS2Q9H0H0 1204 aaKnown RBP14.45□□□□□ -0.1
HDAC1-206ENST00000476391 GBA3Q9H227 469 aa14.45□□□□□ -0.1
HDAC1-206ENST00000476391 ALG13Q9NP73 1137 aaKnown RBP14.45□□□□□ -0.1
HDAC1-206ENST00000476391 DCP1AQ9NPI6 582 aaPredicted RBP14.45□□□□□ -0.1
HDAC1-206ENST00000476391 SLC38A7Q9NVC3 462 aa14.45□□□□□ -0.1
HDAC1-206ENST00000476391 CLEC11AQ9Y240 323 aa14.45□□□□□ -0.1
HDAC1-206ENST00000476391 LAMB2P55268 1798 aa14.45□□□□□ -0.1
HDAC1-206ENST00000476391 FAM170AA1A519 330 aa14.45□□□□□ -0.1
HDAC1-206ENST00000476391 IPO5O00410 1097 aaKnown RBP14.45□□□□□ -0.1
HDAC1-206ENST00000476391 EDIL3O43854 480 aa14.45□□□□□ -0.1
HDAC1-206ENST00000476391 LPXNO60711 386 aa14.45□□□□□ -0.1
HDAC1-206ENST00000476391 BGNP21810 368 aa14.45□□□□□ -0.1
HDAC1-206ENST00000476391 CDH3P22223 829 aa14.45□□□□□ -0.1
HDAC1-206ENST00000476391 PRDX6P30041 224 aa14.45□□□□□ -0.1
HDAC1-206ENST00000476391 SLC12A3P55017 1021 aa14.45□□□□□ -0.1
HDAC1-206ENST00000476391 MECOMQ03112 1051 aa14.45□□□□□ -0.1
HDAC1-206ENST00000476391 KCNC4Q03721 635 aa14.45□□□□□ -0.1
HDAC1-206ENST00000476391 CAMK2BQ13554 666 aa14.45□□□□□ -0.1
HDAC1-206ENST00000476391 SEPT6Q14141 434 aa14.45□□□□□ -0.1
HDAC1-206ENST00000476391 RARS2Q5T160 578 aaKnown RBP14.45□□□□□ -0.1
HDAC1-206ENST00000476391 PQLC1Q8N2U9 271 aa14.45□□□□□ -0.1
HDAC1-206ENST00000476391 MKNK1Q9BUB5 465 aa14.45□□□□□ -0.1
HDAC1-206ENST00000476391 TMEM260Q9NX78 707 aa14.45□□□□□ -0.1
HDAC1-206ENST00000476391 CNTN3Q9P232 1028 aa14.45□□□□□ -0.1
HDAC1-206ENST00000476391 GTF3C4Q9UKN8 822 aa14.45□□□□□ -0.1
HDAC1-206ENST00000476391 PCDHA12Q9UN75 941 aa14.45□□□□□ -0.1
HDAC1-206ENST00000476391 PSMD13Q9UNM6 376 aa14.45□□□□□ -0.1
HDAC1-206ENST00000476391 PPME1Q9Y570 386 aa14.45□□□□□ -0.1
HDAC1-206ENST00000476391 KIAA1551Q9HCM1 1747 aa14.44□□□□□ -0.1
HDAC1-206ENST00000476391 SF3B1O75533 1304 aaKnown RBP eCLIP14.44□□□□□ -0.14e-6■■■■■ 58.8
HDAC1-206ENST00000476391 PRR5-ARHGAP8B1AHC4 643 aa14.44□□□□□ -0.1
HDAC1-206ENST00000476391 C6orf222P0C671 652 aaPredicted RBP14.44□□□□□ -0.1
HDAC1-206ENST00000476391 EEF2P13639 858 aaKnown RBP14.44□□□□□ -0.1
HDAC1-206ENST00000476391 ARHGAP8P85298 464 aa14.44□□□□□ -0.1
HDAC1-206ENST00000476391 FASTKD3Q14CZ7 662 aaKnown RBP14.44□□□□□ -0.1
HDAC1-206ENST00000476391 HSF5Q4G112 596 aaPredicted RBP14.44□□□□□ -0.1
HDAC1-206ENST00000476391 RSPH3Q86UC2 560 aa14.44□□□□□ -0.1
HDAC1-206ENST00000476391 ACTRT2Q8TDY3 377 aa14.44□□□□□ -0.1
HDAC1-206ENST00000476391 EME1Q96AY2 570 aa14.44□□□□□ -0.1
HDAC1-206ENST00000476391 BTBD6Q96KE9 485 aa14.44□□□□□ -0.1
HDAC1-206ENST00000476391 FHDC1Q9C0D6 1143 aaPredicted RBP14.44□□□□□ -0.1
HDAC1-206ENST00000476391 PCDHGB4Q9UN71 923 aa14.44□□□□□ -0.1
HDAC1-206ENST00000476391 EXOC7Q9UPT5 735 aa14.44□□□□□ -0.1
HDAC1-206ENST00000476391 PCDHGB5Q9Y5G0 923 aa14.44□□□□□ -0.1
HDAC1-206ENST00000476391 IQCA1LA6NCM1 817 aa14.44□□□□□ -0.1
HDAC1-206ENST00000476391 CNOT3O75175 753 aaKnown RBP14.44□□□□□ -0.1
HDAC1-206ENST00000476391 LDHAP00338 332 aaKnown RBP14.44□□□□□ -0.1
HDAC1-206ENST00000476391 FUCA1P04066 466 aa14.44□□□□□ -0.1
HDAC1-206ENST00000476391 EIF2B2P49770 351 aaKnown RBP14.44□□□□□ -0.1
HDAC1-206ENST00000476391 KLF1Q13351 362 aaPredicted RBP14.44□□□□□ -0.1
HDAC1-206ENST00000476391 NFIL3Q16649 462 aa14.44□□□□□ -0.1
HDAC1-206ENST00000476391 KLHL38Q2WGJ6 581 aa14.44□□□□□ -0.1
HDAC1-206ENST00000476391 ANKDD1AQ495B1 522 aa14.44□□□□□ -0.1
HDAC1-206ENST00000476391 DCLRE1AQ6PJP8 1040 aa14.44□□□□□ -0.1
HDAC1-206ENST00000476391 PAOXQ6QHF9 649 aa14.44□□□□□ -0.1
HDAC1-206ENST00000476391 ZNF804AQ7Z570 1209 aa14.44□□□□□ -0.1
HDAC1-206ENST00000476391 PPM1KQ8N3J5 372 aa14.44□□□□□ -0.1
HDAC1-206ENST00000476391 POU5F2Q8N7G0 328 aa14.44□□□□□ -0.1
HDAC1-206ENST00000476391 CHPT1Q8WUD6 406 aa14.44□□□□□ -0.1
HDAC1-206ENST00000476391 EFHD2Q96C19 240 aaPredicted RBP14.44□□□□□ -0.1
HDAC1-206ENST00000476391 MRRFQ96E11 262 aaKnown RBP14.44□□□□□ -0.1
HDAC1-206ENST00000476391 RANBP9Q96S59 729 aa14.44□□□□□ -0.1
HDAC1-206ENST00000476391 NUF2Q9BZD4 464 aa14.44□□□□□ -0.1
HDAC1-206ENST00000476391 SMYD3Q9H7B4 428 aa14.44□□□□□ -0.1
HDAC1-206ENST00000476391 PALMDQ9NP74 551 aa14.44□□□□□ -0.1
HDAC1-206ENST00000476391 CHORDC1Q9UHD1 332 aaPredicted RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms