RNA–Protein interactions for RNA: ENST00000475800.5

SNX13-207, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-207ENST00000475800 DOCK8Q8NF50 2099 aa16.11■□□□□ 0.17
SNX13-207ENST00000475800 CCL16O15467 120 aa16.11■□□□□ 0.17
SNX13-207ENST00000475800 PDGFBP01127 241 aaPredicted RBP16.11■□□□□ 0.17
SNX13-207ENST00000475800 HAPLN1P10915 354 aaPredicted RBP16.11■□□□□ 0.17
SNX13-207ENST00000475800 PTPN1P18031 435 aaKnown RBP16.11■□□□□ 0.17
SNX13-207ENST00000475800 MAGEA11P43364 429 aa16.11■□□□□ 0.17
SNX13-207ENST00000475800 ZNF165P49910 485 aa16.11■□□□□ 0.17
SNX13-207ENST00000475800 NDST1P52848 882 aa16.11■□□□□ 0.17
SNX13-207ENST00000475800 EPHB3P54753 998 aa16.11■□□□□ 0.17
SNX13-207ENST00000475800 VCPP55072 806 aaKnown RBP16.11■□□□□ 0.17
SNX13-207ENST00000475800 CUL2Q13617 745 aa16.11■□□□□ 0.17
SNX13-207ENST00000475800 ZSCAN23Q3MJ62 389 aa16.11■□□□□ 0.17
SNX13-207ENST00000475800 MGAT5BQ3V5L5 792 aa16.11■□□□□ 0.17
SNX13-207ENST00000475800 VWA3BQ502W6 1294 aa16.11■□□□□ 0.17
SNX13-207ENST00000475800 IQCEQ6IPM2 695 aa16.11■□□□□ 0.17
SNX13-207ENST00000475800 GBP6Q6ZN66 633 aa16.11■□□□□ 0.17
SNX13-207ENST00000475800 ITIH5Q86UX2 942 aa16.11■□□□□ 0.17
SNX13-207ENST00000475800 LEMD2Q8NC56 503 aa16.11■□□□□ 0.17
SNX13-207ENST00000475800 LMO3Q8TAP4 145 aa16.11■□□□□ 0.17
SNX13-207ENST00000475800 ZNF512Q96ME7 567 aaPredicted RBP16.11■□□□□ 0.17
SNX13-207ENST00000475800 NT5C1AQ9BXI3 368 aa16.11■□□□□ 0.17
SNX13-207ENST00000475800 SDCBP2Q9H190 292 aa16.11■□□□□ 0.17
SNX13-207ENST00000475800 NDST4Q9H3R1 872 aa16.11■□□□□ 0.17
SNX13-207ENST00000475800 SMOC2Q9H3U7 446 aa16.11■□□□□ 0.17
SNX13-207ENST00000475800 WDR6Q9NNW5 1121 aaKnown RBP16.11■□□□□ 0.17
SNX13-207ENST00000475800 CRTAC1Q9NQ79 661 aa16.11■□□□□ 0.17
SNX13-207ENST00000475800 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.11■□□□□ 0.17
SNX13-207ENST00000475800 FAM86C1Q9NVL1 165 aa16.11■□□□□ 0.17
SNX13-207ENST00000475800 FANCLQ9NW38 375 aa16.11■□□□□ 0.17
SNX13-207ENST00000475800 GCNT4Q9P109 453 aa16.11■□□□□ 0.17
SNX13-207ENST00000475800 ATP8B3O60423 1300 aa16.11■□□□□ 0.17
SNX13-207ENST00000475800 MYBPHLA2RUH7 354 aa16.1■□□□□ 0.17
SNX13-207ENST00000475800 C2CD4DB7Z1M9 353 aa16.1■□□□□ 0.17
SNX13-207ENST00000475800 LRRN2O75325 713 aa16.1■□□□□ 0.17
SNX13-207ENST00000475800 CILPO75339 1184 aa16.1■□□□□ 0.17
SNX13-207ENST00000475800 ASGR2P07307 311 aa16.1■□□□□ 0.17
SNX13-207ENST00000475800 PTPN2P17706 415 aa16.1■□□□□ 0.17
SNX13-207ENST00000475800 PSMC1P62191 440 aaKnown RBP16.1■□□□□ 0.17
SNX13-207ENST00000475800 RPL10AP62906 217 aaKnown RBP16.1■□□□□ 0.17
SNX13-207ENST00000475800 GCNT1Q02742 428 aa16.1■□□□□ 0.17
SNX13-207ENST00000475800 TWF1Q12792 350 aa16.1■□□□□ 0.17
SNX13-207ENST00000475800 VEPH1Q14D04 833 aa16.1■□□□□ 0.17
SNX13-207ENST00000475800 PTPN21Q16825 1174 aa16.1■□□□□ 0.17
SNX13-207ENST00000475800 EXOC3L4Q17RC7 722 aa16.1■□□□□ 0.17
SNX13-207ENST00000475800 MDH1BQ5I0G3 518 aa16.1■□□□□ 0.17
SNX13-207ENST00000475800 SMYD5Q6GMV2 418 aa16.1■□□□□ 0.17
SNX13-207ENST00000475800 VSTM1Q6UX27 236 aa16.1■□□□□ 0.17
SNX13-207ENST00000475800 CRYBG2Q8N1P7 616 aa16.1■□□□□ 0.17
SNX13-207ENST00000475800 FBXL6Q8N531 539 aa16.1■□□□□ 0.17
SNX13-207ENST00000475800 AOPEPQ8N6M6 819 aa16.1■□□□□ 0.17
SNX13-207ENST00000475800 TATDN2Q93075 761 aa16.1■□□□□ 0.17
SNX13-207ENST00000475800 MYLPFQ96A32 169 aa16.1■□□□□ 0.17
SNX13-207ENST00000475800 ELMO3Q96BJ8 720 aa16.1■□□□□ 0.17
SNX13-207ENST00000475800 CEP295NLQ96MC4 621 aa16.1■□□□□ 0.17
SNX13-207ENST00000475800 SEPT5Q99719 369 aaPredicted RBP16.1■□□□□ 0.17
SNX13-207ENST00000475800 INTS2Q9H0H0 1204 aaKnown RBP16.1■□□□□ 0.17
SNX13-207ENST00000475800 AVENQ9NQS1 362 aaPredicted RBP16.1■□□□□ 0.17
SNX13-207ENST00000475800 TMLHEQ9NVH6 421 aa16.1■□□□□ 0.17
SNX13-207ENST00000475800 USTQ9Y2C2 406 aa16.1■□□□□ 0.17
SNX13-207ENST00000475800 NR2E1Q9Y466 385 aa16.1■□□□□ 0.17
SNX13-207ENST00000475800 NOTCH4Q99466 2003 aa16.1■□□□□ 0.17
SNX13-207ENST00000475800 CLUHO75153 1309 aa16.1■□□□□ 0.17
SNX13-207ENST00000475800 BECN2A8MW95 431 aa16.09■□□□□ 0.17
SNX13-207ENST00000475800 HCRTO43612 131 aa16.09■□□□□ 0.17
SNX13-207ENST00000475800 ATP2C2O75185 946 aa16.09■□□□□ 0.17
SNX13-207ENST00000475800 CDK11BP21127 795 aaKnown RBP16.09■□□□□ 0.17
SNX13-207ENST00000475800 CYP27A1Q02318 531 aa16.09■□□□□ 0.17
SNX13-207ENST00000475800 SIGLEC14Q08ET2 396 aa16.09■□□□□ 0.17
SNX13-207ENST00000475800 NCAPHQ15003 741 aa16.09■□□□□ 0.17
SNX13-207ENST00000475800 HSP90AA4PQ58FG1 418 aa16.09■□□□□ 0.17
SNX13-207ENST00000475800 ENOSF1Q7L5Y1 443 aa16.09■□□□□ 0.17
SNX13-207ENST00000475800 PPM1KQ8N3J5 372 aa16.09■□□□□ 0.17
SNX13-207ENST00000475800 JAKMIP2Q96AA8 810 aa16.09■□□□□ 0.17
SNX13-207ENST00000475800 PCED1BQ96HM7 432 aa16.09■□□□□ 0.17
SNX13-207ENST00000475800 ELOVL4Q9GZR5 314 aa16.09■□□□□ 0.17
SNX13-207ENST00000475800 CRISPLD1Q9H336 500 aa16.09■□□□□ 0.17
SNX13-207ENST00000475800 CISHQ9NSE2 258 aa16.09■□□□□ 0.17
SNX13-207ENST00000475800 SLC27A5Q9Y2P5 690 aa16.09■□□□□ 0.17
SNX13-207ENST00000475800 NME7Q9Y5B8 376 aa16.09■□□□□ 0.17
SNX13-207ENST00000475800 GREB1Q4ZG55 1949 aa16.08■□□□□ 0.16
SNX13-207ENST00000475800 PES1O00541 588 aaKnown RBP16.08■□□□□ 0.16
SNX13-207ENST00000475800 ZNF197O14709 1029 aa16.08■□□□□ 0.16
SNX13-207ENST00000475800 TRIM66O15016 1216 aa16.08■□□□□ 0.16
SNX13-207ENST00000475800 FGF19O95750 216 aa16.08■□□□□ 0.16
SNX13-207ENST00000475800 ZNF18P17022 549 aa16.08■□□□□ 0.16
SNX13-207ENST00000475800 CD58P19256 250 aa16.08■□□□□ 0.16
SNX13-207ENST00000475800 LRMPQ12912 555 aa16.08■□□□□ 0.16
SNX13-207ENST00000475800 KRT31Q15323 416 aa16.08■□□□□ 0.16
SNX13-207ENST00000475800 PABPC1LQ4VXU2 614 aaKnown RBP16.08■□□□□ 0.16
SNX13-207ENST00000475800 MIIPQ5JXC2 388 aa16.08■□□□□ 0.16
SNX13-207ENST00000475800 TRIM65Q6PJ69 517 aa16.08■□□□□ 0.16
SNX13-207ENST00000475800 OTOP3Q7RTS5 596 aa16.08■□□□□ 0.16
SNX13-207ENST00000475800 GRASPQ7Z6J2 395 aaPredicted RBP16.08■□□□□ 0.16
SNX13-207ENST00000475800 ACOT1Q86TX2 421 aa16.08■□□□□ 0.16
SNX13-207ENST00000475800 TTC9BQ8N6N2 239 aa16.08■□□□□ 0.16
SNX13-207ENST00000475800 PSMG2Q969U7 264 aa16.08■□□□□ 0.16
SNX13-207ENST00000475800 ACSF2Q96CM8 615 aaPredicted RBP16.08■□□□□ 0.16
SNX13-207ENST00000475800 DPEP3Q9H4B8 488 aa16.08■□□□□ 0.16
SNX13-207ENST00000475800 ASAH2Q9NR71 780 aa16.08■□□□□ 0.16
SNX13-207ENST00000475800 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms