RNA–Protein interactions for RNA: ENST00000474805.5

TRIM13-207, Transcript of tripartite motif containing 13, humanhuman

TSL 5

Gene TRIM13, Length 403 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-207ENST00000474805 RAB34Q9BZG1 259 aa13.4□□□□□ -0.26
TRIM13-207ENST00000474805 LINC00597Q9H2U6 94 aa13.4□□□□□ -0.26
TRIM13-207ENST00000474805 FOXP1Q9H334 677 aaPredicted RBP13.4□□□□□ -0.26
TRIM13-207ENST00000474805 TRPC7Q9HCX4 862 aa13.4□□□□□ -0.26
TRIM13-207ENST00000474805 TMEM74BQ9NUR3 256 aa13.4□□□□□ -0.26
TRIM13-207ENST00000474805 TMLHEQ9NVH6 421 aa13.4□□□□□ -0.26
TRIM13-207ENST00000474805 EVLQ9UI08 416 aaPredicted RBP13.4□□□□□ -0.26
TRIM13-207ENST00000474805 DSEQ9UL01 958 aa13.4□□□□□ -0.26
TRIM13-207ENST00000474805 CIZ1Q9ULV3 898 aaPredicted RBP13.4□□□□□ -0.26
TRIM13-207ENST00000474805 MYO18AQ92614 2054 aaKnown RBP13.4□□□□□ -0.27
TRIM13-207ENST00000474805 GCN1Q92616 2671 aaKnown RBP13.39□□□□□ -0.27
TRIM13-207ENST00000474805 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.39□□□□□ -0.27
TRIM13-207ENST00000474805 ANO9A1A5B4 782 aa13.39□□□□□ -0.27
TRIM13-207ENST00000474805 K7EQS6 105 aa13.39□□□□□ -0.27
TRIM13-207ENST00000474805 OGTO15294 1046 aa13.39□□□□□ -0.27
TRIM13-207ENST00000474805 MAP3K13O43283 966 aa13.39□□□□□ -0.27
TRIM13-207ENST00000474805 PRPF40AO75400 957 aaKnown RBP13.39□□□□□ -0.27
TRIM13-207ENST00000474805 TADA3O75528 432 aa13.39□□□□□ -0.27
TRIM13-207ENST00000474805 ENGP17813 658 aa13.39□□□□□ -0.27
TRIM13-207ENST00000474805 PAX3P23760 479 aa13.39□□□□□ -0.27
TRIM13-207ENST00000474805 PTGER3P43115 390 aa13.39□□□□□ -0.27
TRIM13-207ENST00000474805 FAM160A1Q05DH4 1040 aa13.39□□□□□ -0.27
TRIM13-207ENST00000474805 SMARCB1Q12824 385 aa13.39□□□□□ -0.27
TRIM13-207ENST00000474805 ZNF77Q15935 545 aa13.39□□□□□ -0.27
TRIM13-207ENST00000474805 KYAT1Q16773 422 aa13.39□□□□□ -0.27
TRIM13-207ENST00000474805 DDR2Q16832 855 aa13.39□□□□□ -0.27
TRIM13-207ENST00000474805 C19orf48Q6RUI8 117 aa13.39□□□□□ -0.27
TRIM13-207ENST00000474805 PIP4P1Q86T03 277 aa13.39□□□□□ -0.27
TRIM13-207ENST00000474805 EFCAB13Q8IY85 973 aa13.39□□□□□ -0.27
TRIM13-207ENST00000474805 TMEFF1Q8IYR6 380 aa13.39□□□□□ -0.27
TRIM13-207ENST00000474805 CHCHD4Q8N4Q1 142 aa13.39□□□□□ -0.27
TRIM13-207ENST00000474805 ATP2A3Q93084 1043 aa13.39□□□□□ -0.27
TRIM13-207ENST00000474805 PLIN2Q99541 437 aa13.39□□□□□ -0.27
TRIM13-207ENST00000474805 PCDHB5Q9Y5E4 795 aa13.39□□□□□ -0.27
TRIM13-207ENST00000474805 PLXND1Q9Y4D7 1925 aa13.39□□□□□ -0.27
TRIM13-207ENST00000474805 HNRNPDLO14979 420 aaKnown RBP13.38□□□□□ -0.27
TRIM13-207ENST00000474805 USP17L7P0C7H9 530 aa13.38□□□□□ -0.27
TRIM13-207ENST00000474805 CSH1P0DML2 217 aa13.38□□□□□ -0.27
TRIM13-207ENST00000474805 CSH2P0DML3 217 aa13.38□□□□□ -0.27
TRIM13-207ENST00000474805 HNRNPLP14866 589 aaKnown RBP eCLIP13.38□□□□□ -0.27
TRIM13-207ENST00000474805 TAF6P49848 677 aa13.38□□□□□ -0.27
TRIM13-207ENST00000474805 NCKAP1LP55160 1127 aa13.38□□□□□ -0.27
TRIM13-207ENST00000474805 NR1H3Q13133 447 aa13.38□□□□□ -0.27
TRIM13-207ENST00000474805 GNL2Q13823 731 aaKnown RBP13.38□□□□□ -0.27
TRIM13-207ENST00000474805 TMEM132DQ14C87 1099 aa13.38□□□□□ -0.27
TRIM13-207ENST00000474805 CRY1Q16526 586 aa13.38□□□□□ -0.27
TRIM13-207ENST00000474805 TMEM92Q6UXU6 159 aa13.38□□□□□ -0.27
TRIM13-207ENST00000474805 LPCAT2Q7L5N7 544 aa13.38□□□□□ -0.27
TRIM13-207ENST00000474805 CD302Q8IX05 232 aa13.38□□□□□ -0.27
TRIM13-207ENST00000474805 DCP1BQ8IZD4 617 aaKnown RBP13.38□□□□□ -0.27
TRIM13-207ENST00000474805 SYT2Q8N9I0 419 aaPredicted RBP13.38□□□□□ -0.27
TRIM13-207ENST00000474805 OLIG1Q8TAK6 271 aa13.38□□□□□ -0.27
TRIM13-207ENST00000474805 FNBP1Q96RU3 617 aa13.38□□□□□ -0.27
TRIM13-207ENST00000474805 FSCN3Q9NQT6 498 aa13.38□□□□□ -0.27
TRIM13-207ENST00000474805 MBD1Q9UIS9 605 aaPredicted RBP13.38□□□□□ -0.27
TRIM13-207ENST00000474805 CPSF3Q9UKF6 684 aaKnown RBP13.38□□□□□ -0.27
TRIM13-207ENST00000474805 MMP17Q9ULZ9 603 aa13.38□□□□□ -0.27
TRIM13-207ENST00000474805 NOL7Q9UMY1 257 aaKnown RBP13.38□□□□□ -0.27
TRIM13-207ENST00000474805 PCDHB6Q9Y5E3 794 aa13.38□□□□□ -0.27
TRIM13-207ENST00000474805 ATXN2Q99700 1313 aaKnown RBP13.38□□□□□ -0.27
TRIM13-207ENST00000474805 TRAV19A0A0A6YYK7 116 aa13.37□□□□□ -0.27
TRIM13-207ENST00000474805 A0A0B4J269 797 aa13.37□□□□□ -0.27
TRIM13-207ENST00000474805 TNFRSF10BO14763 440 aa13.37□□□□□ -0.27
TRIM13-207ENST00000474805 CAPNS1P04632 268 aa13.37□□□□□ -0.27
TRIM13-207ENST00000474805 CKMP06732 381 aa13.37□□□□□ -0.27
TRIM13-207ENST00000474805 CYP2F1P24903 491 aa13.37□□□□□ -0.27
TRIM13-207ENST00000474805 OPRD1P41143 372 aa13.37□□□□□ -0.27
TRIM13-207ENST00000474805 TRAPPC10P48553 1259 aa13.37□□□□□ -0.27
TRIM13-207ENST00000474805 ACOT2P49753 483 aa13.37□□□□□ -0.27
TRIM13-207ENST00000474805 TOB1P50616 345 aaPredicted RBP13.37□□□□□ -0.27
TRIM13-207ENST00000474805 FAM193AP78312 1265 aa13.37□□□□□ -0.27
TRIM13-207ENST00000474805 USP4Q13107 963 aa13.37□□□□□ -0.27
TRIM13-207ENST00000474805 SEMA3BQ13214 749 aa13.37□□□□□ -0.27
TRIM13-207ENST00000474805 ZC2HC1CQ53FD0 456 aaPredicted RBP13.37□□□□□ -0.27
TRIM13-207ENST00000474805 SOWAHCQ53LP3 525 aaPredicted RBP13.37□□□□□ -0.27
TRIM13-207ENST00000474805 PROSER1Q86XN7 944 aa13.37□□□□□ -0.27
TRIM13-207ENST00000474805 SYT12Q8IV01 421 aa13.37□□□□□ -0.27
TRIM13-207ENST00000474805 ARL14EPQ8N8R7 260 aaPredicted RBP13.37□□□□□ -0.27
TRIM13-207ENST00000474805 CCDC26Q8TAB7 109 aa13.37□□□□□ -0.27
TRIM13-207ENST00000474805 SH3RF2Q8TEC5 729 aa13.37□□□□□ -0.27
TRIM13-207ENST00000474805 LRRC15Q8TF66 581 aa13.37□□□□□ -0.27
TRIM13-207ENST00000474805 PNMA5Q96PV4 448 aa13.37□□□□□ -0.27
TRIM13-207ENST00000474805 MSTO1Q9BUK6 570 aa13.37□□□□□ -0.27
TRIM13-207ENST00000474805 DPP3Q9NY33 737 aa13.37□□□□□ -0.27
TRIM13-207ENST00000474805 LARSQ9P2J5 1176 aaKnown RBP13.37□□□□□ -0.27
TRIM13-207ENST00000474805 PLXNB3Q9ULL4 1909 aa13.37□□□□□ -0.27
TRIM13-207ENST00000474805 SETXQ7Z333 2677 aaKnown RBP13.36□□□□□ -0.27
TRIM13-207ENST00000474805 LAMA5O15230 3695 aa13.36□□□□□ -0.27
TRIM13-207ENST00000474805 IGSF10Q6WRI0 2623 aa13.36□□□□□ -0.27
TRIM13-207ENST00000474805 FAM221BA6H8Z2 402 aa13.36□□□□□ -0.27
TRIM13-207ENST00000474805 H0YCG3 227 aa13.36□□□□□ -0.27
TRIM13-207ENST00000474805 NOL4O94818 638 aa13.36□□□□□ -0.27
TRIM13-207ENST00000474805 P2RY2P41231 377 aa13.36□□□□□ -0.27
TRIM13-207ENST00000474805 SLC12A3P55017 1021 aa13.36□□□□□ -0.27
TRIM13-207ENST00000474805 ANAPC15P60006 121 aa13.36□□□□□ -0.27
TRIM13-207ENST00000474805 ARSHQ5FYA8 562 aa13.36□□□□□ -0.27
TRIM13-207ENST00000474805 SLC39A4Q6P5W5 647 aa13.36□□□□□ -0.27
TRIM13-207ENST00000474805 SLC23A3Q6PIS1 610 aa13.36□□□□□ -0.27
TRIM13-207ENST00000474805 DTHD1Q6ZMT9 781 aa13.36□□□□□ -0.27
TRIM13-207ENST00000474805 SFTPA1Q8IWL2 248 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms