RNA–Protein interactions for RNA: ENST00000474644.1

COL1A1-204, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-204ENST00000474644 AJAP1Q9UKB5 411 aaPredicted RBP16.76■□□□□ 0.27
COL1A1-204ENST00000474644 USP15Q9Y4E8 981 aaPredicted RBP16.76■□□□□ 0.27
COL1A1-204ENST00000474644 A0A1B0GTH6 734 aa16.75■□□□□ 0.27
COL1A1-204ENST00000474644 GRXCR2A6NFK2 248 aa16.75■□□□□ 0.27
COL1A1-204ENST00000474644 MBTPS2O43462 519 aa16.75■□□□□ 0.27
COL1A1-204ENST00000474644 CCDC130P13994 396 aa16.75■□□□□ 0.27
COL1A1-204ENST00000474644 ATF6P18850 670 aa16.75■□□□□ 0.27
COL1A1-204ENST00000474644 TRIM21P19474 475 aaKnown RBP16.75■□□□□ 0.27
COL1A1-204ENST00000474644 CYP2F1P24903 491 aa16.75■□□□□ 0.27
COL1A1-204ENST00000474644 KLK7P49862 253 aa16.75■□□□□ 0.27
COL1A1-204ENST00000474644 MFAP3P55082 362 aa16.75■□□□□ 0.27
COL1A1-204ENST00000474644 UBXN1Q04323 297 aa16.75■□□□□ 0.27
COL1A1-204ENST00000474644 TWF1Q12792 350 aa16.75■□□□□ 0.27
COL1A1-204ENST00000474644 PLD1Q13393 1074 aa16.75■□□□□ 0.27
COL1A1-204ENST00000474644 SYCP1Q15431 976 aa16.75■□□□□ 0.27
COL1A1-204ENST00000474644 MGAT5BQ3V5L5 792 aa16.75■□□□□ 0.27
COL1A1-204ENST00000474644 TMEM270Q6UE05 265 aa16.75■□□□□ 0.27
COL1A1-204ENST00000474644 ENOSF1Q7L5Y1 443 aa16.75■□□□□ 0.27
COL1A1-204ENST00000474644 FAM35AQ86V20 835 aa16.75■□□□□ 0.27
COL1A1-204ENST00000474644 C12orf29Q8N999 325 aa16.75■□□□□ 0.27
COL1A1-204ENST00000474644 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.75■□□□□ 0.27
COL1A1-204ENST00000474644 SMG7Q92540 1137 aaKnown RBP16.75■□□□□ 0.27
COL1A1-204ENST00000474644 JAKMIP2Q96AA8 810 aa16.75■□□□□ 0.27
COL1A1-204ENST00000474644 TMEM176AQ96HP8 235 aa16.75■□□□□ 0.27
COL1A1-204ENST00000474644 FAM81BQ96LP2 452 aa16.75■□□□□ 0.27
COL1A1-204ENST00000474644 B3GNT5Q9BYG0 378 aa16.75■□□□□ 0.27
COL1A1-204ENST00000474644 ZNF518BQ9C0D4 1074 aa16.75■□□□□ 0.27
COL1A1-204ENST00000474644 DNAI2Q9GZS0 605 aa16.75■□□□□ 0.27
COL1A1-204ENST00000474644 RTN4Q9NQC3 1192 aaKnown RBP16.75■□□□□ 0.27
COL1A1-204ENST00000474644 FAM49BQ9NUQ9 324 aa16.75■□□□□ 0.27
COL1A1-204ENST00000474644 SIK3Q9Y2K2 1263 aa16.75■□□□□ 0.27
COL1A1-204ENST00000474644 PCDHB4Q9Y5E5 795 aa16.75■□□□□ 0.27
COL1A1-204ENST00000474644 TCF20Q9UGU0 1960 aaKnown RBP16.75■□□□□ 0.27
COL1A1-204ENST00000474644 CLDN5O00501 218 aa16.74■□□□□ 0.27
COL1A1-204ENST00000474644 XYLBO75191 536 aa16.74■□□□□ 0.27
COL1A1-204ENST00000474644 SERPINC1P01008 464 aa16.74■□□□□ 0.27
COL1A1-204ENST00000474644 MAGEA11P43364 429 aa16.74■□□□□ 0.27
COL1A1-204ENST00000474644 TUFMP49411 452 aaKnown RBP16.74■□□□□ 0.27
COL1A1-204ENST00000474644 GPR15P49685 360 aa16.74■□□□□ 0.27
COL1A1-204ENST00000474644 ZNF132P52740 706 aa16.74■□□□□ 0.27
COL1A1-204ENST00000474644 FANCCQ00597 558 aa16.74■□□□□ 0.27
COL1A1-204ENST00000474644 FILIP1LQ4L180 1135 aa16.74■□□□□ 0.27
COL1A1-204ENST00000474644 KLHDC7AQ5VTJ3 777 aa16.74■□□□□ 0.27
COL1A1-204ENST00000474644 IQCEQ6IPM2 695 aa16.74■□□□□ 0.27
COL1A1-204ENST00000474644 CES5AQ6NT32 575 aa16.74■□□□□ 0.27
COL1A1-204ENST00000474644 CYP26C1Q6V0L0 522 aa16.74■□□□□ 0.27
COL1A1-204ENST00000474644 FUKQ8N0W3 1084 aa16.74■□□□□ 0.27
COL1A1-204ENST00000474644 RBBP8NLQ8NC74 664 aaPredicted RBP16.74■□□□□ 0.27
COL1A1-204ENST00000474644 SLC2A14Q8TDB8 520 aa16.74■□□□□ 0.27
COL1A1-204ENST00000474644 SUSD6Q92537 303 aa16.74■□□□□ 0.27
COL1A1-204ENST00000474644 NAP1L5Q96NT1 182 aaPredicted RBP16.74■□□□□ 0.27
COL1A1-204ENST00000474644 ERGIC2Q96RQ1 377 aa16.74■□□□□ 0.27
COL1A1-204ENST00000474644 GANQ9H2C0 597 aa16.74■□□□□ 0.27
COL1A1-204ENST00000474644 PLCB1Q9NQ66 1216 aa16.74■□□□□ 0.27
COL1A1-204ENST00000474644 CEP72Q9P209 647 aa16.74■□□□□ 0.27
COL1A1-204ENST00000474644 DNAJC12Q9UKB3 198 aa16.74■□□□□ 0.27
COL1A1-204ENST00000474644 FHOD1Q9Y613 1164 aa16.74■□□□□ 0.27
COL1A1-204ENST00000474644 ATP8B3O60423 1300 aa16.73■□□□□ 0.27
COL1A1-204ENST00000474644 BDP1A6H8Y1 2624 aa16.73■□□□□ 0.27
COL1A1-204ENST00000474644 MTCL1Q9Y4B5 1905 aaKnown RBP16.73■□□□□ 0.27
COL1A1-204ENST00000474644 TEX33O43247 280 aa16.73■□□□□ 0.27
COL1A1-204ENST00000474644 UCHL3P15374 230 aa16.73■□□□□ 0.27
COL1A1-204ENST00000474644 RFX1P22670 979 aa16.73■□□□□ 0.27
COL1A1-204ENST00000474644 BDNFP23560 247 aa16.73■□□□□ 0.27
COL1A1-204ENST00000474644 ALDH1A3P47895 512 aa16.73■□□□□ 0.27
COL1A1-204ENST00000474644 KCNQ1P51787 676 aa16.73■□□□□ 0.27
COL1A1-204ENST00000474644 CACNA2D1P54289 1103 aa16.73■□□□□ 0.27
COL1A1-204ENST00000474644 ARHGAP44Q17R89 818 aa16.73■□□□□ 0.27
COL1A1-204ENST00000474644 AAK1Q2M2I8 961 aa16.73■□□□□ 0.27
COL1A1-204ENST00000474644 PTCRAQ6ISU1 281 aaPredicted RBP16.73■□□□□ 0.27
COL1A1-204ENST00000474644 VSTM1Q6UX27 236 aa16.73■□□□□ 0.27
COL1A1-204ENST00000474644 PAQR9Q6ZVX9 377 aa16.73■□□□□ 0.27
COL1A1-204ENST00000474644 ATXN2LQ8WWM7 1075 aaKnown RBP16.73■□□□□ 0.27
COL1A1-204ENST00000474644 SHC3Q92529 594 aa16.73■□□□□ 0.27
COL1A1-204ENST00000474644 RIPOR3Q96MK2 946 aa16.73■□□□□ 0.27
COL1A1-204ENST00000474644 MED10Q9BTT4 135 aa16.73■□□□□ 0.27
COL1A1-204ENST00000474644 NAA15Q9BXJ9 866 aaKnown RBP16.73■□□□□ 0.27
COL1A1-204ENST00000474644 PIDD1Q9HB75 910 aa16.73■□□□□ 0.27
COL1A1-204ENST00000474644 KRT82Q9NSB4 513 aa16.73■□□□□ 0.27
COL1A1-204ENST00000474644 FAM207AQ9NSI2 230 aaPredicted RBP16.73■□□□□ 0.27
COL1A1-204ENST00000474644 TMEM30AQ9NV96 361 aa16.73■□□□□ 0.27
COL1A1-204ENST00000474644 CNTN6Q9UQ52 1028 aa16.73■□□□□ 0.27
COL1A1-204ENST00000474644 RNF225M0QZC1 329 aaPredicted RBP16.72■□□□□ 0.27
COL1A1-204ENST00000474644 EPHB6O15197 1021 aa16.72■□□□□ 0.27
COL1A1-204ENST00000474644 NOL4O94818 638 aa16.72■□□□□ 0.27
COL1A1-204ENST00000474644 PAEPP09466 180 aa16.72■□□□□ 0.27
COL1A1-204ENST00000474644 KRT5P13647 590 aa16.72■□□□□ 0.27
COL1A1-204ENST00000474644 ADORA2BP29275 332 aa16.72■□□□□ 0.27
COL1A1-204ENST00000474644 MTHFRP42898 656 aa16.72■□□□□ 0.27
COL1A1-204ENST00000474644 EPHB3P54753 998 aa16.72■□□□□ 0.27
COL1A1-204ENST00000474644 RPL10AP62906 217 aaKnown RBP16.72■□□□□ 0.27
COL1A1-204ENST00000474644 MRPS5P82675 430 aaKnown RBP16.72■□□□□ 0.27
COL1A1-204ENST00000474644 CBX2Q14781 532 aaPredicted RBP16.72■□□□□ 0.27
COL1A1-204ENST00000474644 PTPN21Q16825 1174 aa16.72■□□□□ 0.27
COL1A1-204ENST00000474644 DDR2Q16832 855 aa16.72■□□□□ 0.27
COL1A1-204ENST00000474644 PUS10Q3MIT2 529 aaKnown RBP16.72■□□□□ 0.27
COL1A1-204ENST00000474644 ATAT1Q5SQI0 421 aa16.72■□□□□ 0.27
COL1A1-204ENST00000474644 SCN4BQ8IWT1 228 aa16.72■□□□□ 0.27
COL1A1-204ENST00000474644 ELMOD1Q8N336 334 aa16.72■□□□□ 0.27
COL1A1-204ENST00000474644 GPR152Q8TDT2 470 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms