RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 MAGEB16A2A368 324 aa4.83□□□□□ -1.64
CCNL1-215ENST00000474539 H3BM21 787 aa4.83□□□□□ -1.64
CCNL1-215ENST00000474539 CREB3O43889 395 aa4.83□□□□□ -1.64
CCNL1-215ENST00000474539 BNIP3LO60238 219 aa4.83□□□□□ -1.64
CCNL1-215ENST00000474539 TDP2O95551 362 aa4.83□□□□□ -1.64
CCNL1-215ENST00000474539 ASLP04424 464 aa4.83□□□□□ -1.64
CCNL1-215ENST00000474539 STIP1P31948 543 aaKnown RBP4.83□□□□□ -1.64
CCNL1-215ENST00000474539 RPIAP49247 311 aa4.83□□□□□ -1.64
CCNL1-215ENST00000474539 EPHB4P54760 987 aa4.83□□□□□ -1.64
CCNL1-215ENST00000474539 KRT71Q3SY84 523 aa4.83□□□□□ -1.64
CCNL1-215ENST00000474539 MMEL1Q495T6 779 aa4.83□□□□□ -1.64
CCNL1-215ENST00000474539 THEMIS2Q5TEJ8 643 aa4.83□□□□□ -1.64
CCNL1-215ENST00000474539 ICE2Q659A1 982 aa4.83□□□□□ -1.64
CCNL1-215ENST00000474539 TPGS2Q68CL5 300 aa4.83□□□□□ -1.64
CCNL1-215ENST00000474539 PLA2G4FQ68DD2 849 aa4.83□□□□□ -1.64
CCNL1-215ENST00000474539 LRRC8DQ7L1W4 858 aa4.83□□□□□ -1.64
CCNL1-215ENST00000474539 HJURPQ8NCD3 748 aaPredicted RBP4.83□□□□□ -1.64
CCNL1-215ENST00000474539 TNIP2Q8NFZ5 429 aa4.83□□□□□ -1.64
CCNL1-215ENST00000474539 TMEM143Q96AN5 459 aa4.83□□□□□ -1.64
CCNL1-215ENST00000474539 ALKBH8Q96BT7 664 aaKnown RBP4.83□□□□□ -1.64
CCNL1-215ENST00000474539 REPS1Q96D71 796 aa4.83□□□□□ -1.64
CCNL1-215ENST00000474539 PABPC5Q96DU9 382 aaKnown RBP4.83□□□□□ -1.64
CCNL1-215ENST00000474539 RILPQ96NA2 401 aa4.83□□□□□ -1.64
CCNL1-215ENST00000474539 PPP1R16BQ96T49 567 aa4.83□□□□□ -1.64
CCNL1-215ENST00000474539 PRKD2Q9BZL6 878 aa4.83□□□□□ -1.64
CCNL1-215ENST00000474539 XPO4Q9C0E2 1151 aaKnown RBP4.83□□□□□ -1.64
CCNL1-215ENST00000474539 DHX35Q9H5Z1 703 aaKnown RBP4.83□□□□□ -1.64
CCNL1-215ENST00000474539 MED4Q9NPJ6 270 aa4.83□□□□□ -1.64
CCNL1-215ENST00000474539 ABCC13Q9NSE7 274 aa4.83□□□□□ -1.64
CCNL1-215ENST00000474539 INTS7Q9NVH2 962 aaKnown RBP4.83□□□□□ -1.64
CCNL1-215ENST00000474539 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.83□□□□□ -1.64
CCNL1-215ENST00000474539 PKD2L2Q9NZM6 624 aa4.83□□□□□ -1.64
CCNL1-215ENST00000474539 STOML1Q9UBI4 398 aa4.83□□□□□ -1.64
CCNL1-215ENST00000474539 LMO7Q8WWI1 1683 aa4.83□□□□□ -1.64
CCNL1-215ENST00000474539 COL3A1P02461 1466 aaPredicted RBP4.83□□□□□ -1.64
CCNL1-215ENST00000474539 CLGNO14967 610 aa4.83□□□□□ -1.64
CCNL1-215ENST00000474539 PRPF4O43172 522 aaKnown RBP eCLIP4.83□□□□□ -1.64
CCNL1-215ENST00000474539 MTA2O94776 668 aa4.83□□□□□ -1.64
CCNL1-215ENST00000474539 HLA-DRAP01903 254 aa4.83□□□□□ -1.64
CCNL1-215ENST00000474539 MYL4P12829 197 aa4.83□□□□□ -1.64
CCNL1-215ENST00000474539 ATP1A3P13637 1013 aa4.83□□□□□ -1.64
CCNL1-215ENST00000474539 ABL2P42684 1182 aa4.83□□□□□ -1.64
CCNL1-215ENST00000474539 FBXW4P57775 412 aa4.83□□□□□ -1.64
CCNL1-215ENST00000474539 MCL1Q07820 350 aa4.83□□□□□ -1.64
CCNL1-215ENST00000474539 LAMTOR4Q0VGL1 99 aa4.83□□□□□ -1.64
CCNL1-215ENST00000474539 ANKRD20A4Q4UJ75 823 aa4.83□□□□□ -1.64
CCNL1-215ENST00000474539 ANKRD20A8PQ5CZ79 823 aa4.83□□□□□ -1.64
CCNL1-215ENST00000474539 ANKRD20A2Q5SQ80 823 aa4.83□□□□□ -1.64
CCNL1-215ENST00000474539 ANKRD20A1Q5TYW2 823 aa4.83□□□□□ -1.64
CCNL1-215ENST00000474539 SARM1Q6SZW1 724 aa4.83□□□□□ -1.64
CCNL1-215ENST00000474539 LBX2Q6XYB7 198 aa4.83□□□□□ -1.64
CCNL1-215ENST00000474539 ACAD11Q709F0 780 aa4.83□□□□□ -1.64
CCNL1-215ENST00000474539 DEFB128Q7Z7B8 93 aa4.83□□□□□ -1.64
CCNL1-215ENST00000474539 TOP6BLQ8N6T0 577 aa4.83□□□□□ -1.64
CCNL1-215ENST00000474539 ATP11CQ8NB49 1132 aa4.83□□□□□ -1.64
CCNL1-215ENST00000474539 UBE2E3Q969T4 207 aa4.83□□□□□ -1.64
CCNL1-215ENST00000474539 TIFAQ96CG3 184 aa4.83□□□□□ -1.64
CCNL1-215ENST00000474539 MRPL48Q96GC5 212 aaKnown RBP4.83□□□□□ -1.64
CCNL1-215ENST00000474539 NIFKQ9BYG3 293 aaKnown RBP4.83□□□□□ -1.64
CCNL1-215ENST00000474539 GPR63Q9BZJ6 419 aa4.83□□□□□ -1.64
CCNL1-215ENST00000474539 TRIM9Q9C026 710 aa4.83□□□□□ -1.64
CCNL1-215ENST00000474539 UNC45AQ9H3U1 944 aa4.83□□□□□ -1.64
CCNL1-215ENST00000474539 RTN4Q9NQC3 1192 aaKnown RBP4.83□□□□□ -1.64
CCNL1-215ENST00000474539 SAE1Q9UBE0 346 aaPredicted RBP4.83□□□□□ -1.64
CCNL1-215ENST00000474539 PIPSLA2A3N6 862 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 GSTA4O15217 222 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 MSH4O15457 936 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 GLI1P08151 1106 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 ERVK-10P10266 1014 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 PDGFRAP16234 1089 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 EIF4BP23588 611 aaKnown RBP4.82□□□□□ -1.64
CCNL1-215ENST00000474539 PLA2G4AP47712 749 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 FMO5P49326 533 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 SNAP25P60880 206 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 AP2B1P63010 937 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 UBE3AQ05086 875 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 KAZNQ674X7 775 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 TSHZ1Q6ZSZ6 1077 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 TRIM67Q6ZTA4 783 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 TAS2R42Q7RTR8 314 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 TBC1D1Q86TI0 1168 aaPredicted RBP4.82□□□□□ -1.64
CCNL1-215ENST00000474539 KLHL7Q8IXQ5 586 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 STK40Q8N2I9 435 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 QRFPRQ96P65 431 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 FAM167BQ9BTA0 163 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 WDCPQ9H6R7 721 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 CYLDQ9NQC7 956 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 NDFIP2Q9NV92 336 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 CYP39A1Q9NYL5 469 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 VTI1BQ9UEU0 232 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 CLCA2Q9UQC9 943 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 LRP6O75581 1613 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.82□□□□□ -1.64
CCNL1-215ENST00000474539 URADA6NGE7 173 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 RBAK-RBAKDNI3L0D1 243 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 STX7O15400 261 aaKnown RBP4.82□□□□□ -1.64
CCNL1-215ENST00000474539 TIMM44O43615 452 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 FOXD2O60548 495 aaPredicted RBP4.82□□□□□ -1.64
CCNL1-215ENST00000474539 BUB1BO60566 1050 aaPredicted RBP4.82□□□□□ -1.64
CCNL1-215ENST00000474539 LRRN2O75325 713 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms