RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 CHRNB1P11230 501 aa21.81■■□□□ 1.08
PDLIM4-206ENST00000474421 TNNI1P19237 187 aa21.81■■□□□ 1.08
PDLIM4-206ENST00000474421 CYP2J2P51589 502 aa21.81■■□□□ 1.08
PDLIM4-206ENST00000474421 PSMD6Q15008 389 aa21.81■■□□□ 1.08
PDLIM4-206ENST00000474421 DGKKQ5KSL6 1271 aa21.81■■□□□ 1.08
PDLIM4-206ENST00000474421 SCARA3Q6AZY7 606 aa21.81■■□□□ 1.08
PDLIM4-206ENST00000474421 TRAPPC11Q7Z392 1133 aa21.81■■□□□ 1.08
PDLIM4-206ENST00000474421 TMEM150AQ86TG1 271 aa21.81■■□□□ 1.08
PDLIM4-206ENST00000474421 NELFCDQ8IXH7 590 aa21.81■■□□□ 1.08
PDLIM4-206ENST00000474421 C12orf56Q8IXR9 622 aa21.81■■□□□ 1.08
PDLIM4-206ENST00000474421 RDH13Q8NBN7 331 aa21.81■■□□□ 1.08
PDLIM4-206ENST00000474421 GOLGA5Q8TBA6 731 aa21.81■■□□□ 1.08
PDLIM4-206ENST00000474421 MYRFLQ96LU7 910 aa21.81■■□□□ 1.08
PDLIM4-206ENST00000474421 CGRRF1Q99675 332 aa21.81■■□□□ 1.08
PDLIM4-206ENST00000474421 HINFPQ9BQA5 517 aa21.81■■□□□ 1.08
PDLIM4-206ENST00000474421 BLZF1Q9H2G9 400 aa21.81■■□□□ 1.08
PDLIM4-206ENST00000474421 OBSL1O75147 1896 aa21.81■■□□□ 1.08
PDLIM4-206ENST00000474421 CLIC2O15247 247 aa21.8■■□□□ 1.08
PDLIM4-206ENST00000474421 SLFN14P0C7P3 912 aa21.8■■□□□ 1.08
PDLIM4-206ENST00000474421 CTHP32929 405 aa21.8■■□□□ 1.08
PDLIM4-206ENST00000474421 MAGEA11P43364 429 aa21.8■■□□□ 1.08
PDLIM4-206ENST00000474421 AFMP43652 599 aa21.8■■□□□ 1.08
PDLIM4-206ENST00000474421 GPR15P49685 360 aa21.8■■□□□ 1.08
PDLIM4-206ENST00000474421 DNM1Q05193 864 aaKnown RBP21.8■■□□□ 1.08
PDLIM4-206ENST00000474421 CYP24A1Q07973 514 aa21.8■■□□□ 1.08
PDLIM4-206ENST00000474421 DDR2Q16832 855 aa21.8■■□□□ 1.08
PDLIM4-206ENST00000474421 KNOP1Q1ED39 458 aaKnown RBP21.8■■□□□ 1.08
PDLIM4-206ENST00000474421 FAM171BQ6P995 826 aa21.8■■□□□ 1.08
PDLIM4-206ENST00000474421 MON1AQ86VX9 555 aa21.8■■□□□ 1.08
PDLIM4-206ENST00000474421 MAB21L3Q8N8X9 362 aa21.8■■□□□ 1.08
PDLIM4-206ENST00000474421 ZFYVE19Q96K21 471 aa21.8■■□□□ 1.08
PDLIM4-206ENST00000474421 CEP295NLQ96MC4 621 aa21.8■■□□□ 1.08
PDLIM4-206ENST00000474421 MMS19Q96T76 1030 aa21.8■■□□□ 1.08
PDLIM4-206ENST00000474421 SYT15Q9BQS2 421 aa21.8■■□□□ 1.08
PDLIM4-206ENST00000474421 SLC39A2Q9NP94 309 aa21.8■■□□□ 1.08
PDLIM4-206ENST00000474421 FRYLO94915 3013 aa21.8■■□□□ 1.08
PDLIM4-206ENST00000474421 FAM163BP0C2L3 166 aa21.79■■□□□ 1.08
PDLIM4-206ENST00000474421 WARSP23381 471 aaKnown RBP21.79■■□□□ 1.08
PDLIM4-206ENST00000474421 CASP1P29466 404 aa21.79■■□□□ 1.08
PDLIM4-206ENST00000474421 CUL4BQ13620 913 aa21.79■■□□□ 1.08
PDLIM4-206ENST00000474421 PKP1Q13835 747 aa21.79■■□□□ 1.08
PDLIM4-206ENST00000474421 ITPRIPL2Q3MIP1 535 aa21.79■■□□□ 1.08
PDLIM4-206ENST00000474421 SDHAF4Q5VUM1 108 aa21.79■■□□□ 1.08
PDLIM4-206ENST00000474421 VSTM1Q6UX27 236 aa21.79■■□□□ 1.08
PDLIM4-206ENST00000474421 SUMF1Q8NBK3 374 aa21.79■■□□□ 1.08
PDLIM4-206ENST00000474421 KBTBD7Q8WVZ9 684 aa21.79■■□□□ 1.08
PDLIM4-206ENST00000474421 CCDC127Q96BQ5 260 aa21.79■■□□□ 1.08
PDLIM4-206ENST00000474421 TDP1Q9NUW8 608 aa21.79■■□□□ 1.08
PDLIM4-206ENST00000474421 GTSE1Q9NYZ3 720 aa21.79■■□□□ 1.08
PDLIM4-206ENST00000474421 MAGEC2Q9UBF1 373 aaPredicted RBP21.79■■□□□ 1.08
PDLIM4-206ENST00000474421 USP25Q9UHP3 1055 aa21.79■■□□□ 1.08
PDLIM4-206ENST00000474421 KIF26AQ9ULI4 1882 aaPredicted RBP21.79■■□□□ 1.08
PDLIM4-206ENST00000474421 LILRB5O75023 590 aa21.78■■□□□ 1.08
PDLIM4-206ENST00000474421 CXCL12P48061 93 aa21.78■■□□□ 1.08
PDLIM4-206ENST00000474421 SOX9P48436 509 aa21.78■■□□□ 1.08
PDLIM4-206ENST00000474421 ZNF268Q14587 947 aaPredicted RBP21.78■■□□□ 1.08
PDLIM4-206ENST00000474421 TXNDC8Q6A555 127 aa21.78■■□□□ 1.08
PDLIM4-206ENST00000474421 TSSK4Q6SA08 328 aa21.78■■□□□ 1.08
PDLIM4-206ENST00000474421 SCN4BQ8IWT1 228 aa21.78■■□□□ 1.08
PDLIM4-206ENST00000474421 SYNPOQ8N3V7 929 aa21.78■■□□□ 1.08
PDLIM4-206ENST00000474421 SPEM1Q8N4L4 309 aa21.78■■□□□ 1.08
PDLIM4-206ENST00000474421 FSIP1Q8NA03 581 aa21.78■■□□□ 1.08
PDLIM4-206ENST00000474421 SPRYD3Q8NCJ5 442 aa21.78■■□□□ 1.08
PDLIM4-206ENST00000474421 USP13Q92995 863 aaPredicted RBP21.78■■□□□ 1.08
PDLIM4-206ENST00000474421 SECISBP2LQ93073 1101 aaKnown RBP21.78■■□□□ 1.08
PDLIM4-206ENST00000474421 SMG9Q9H0W8 520 aaKnown RBP21.78■■□□□ 1.08
PDLIM4-206ENST00000474421 SNX25Q9H3E2 840 aa21.78■■□□□ 1.08
PDLIM4-206ENST00000474421 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.77■■□□□ 1.08
PDLIM4-206ENST00000474421 EXOC3O60645 756 aa21.77■■□□□ 1.08
PDLIM4-206ENST00000474421 TACC1O75410 805 aa21.77■■□□□ 1.08
PDLIM4-206ENST00000474421 LMO2P25791 158 aa21.77■■□□□ 1.08
PDLIM4-206ENST00000474421 TNNC1P63316 161 aa21.77■■□□□ 1.08
PDLIM4-206ENST00000474421 AMPD2Q01433 879 aa21.77■■□□□ 1.08
PDLIM4-206ENST00000474421 PSMD2Q13200 908 aa21.77■■□□□ 1.08
PDLIM4-206ENST00000474421 TRPC3Q13507 836 aa21.77■■□□□ 1.08
PDLIM4-206ENST00000474421 CC2D1AQ6P1N0 951 aaPredicted RBP21.77■■□□□ 1.08
PDLIM4-206ENST00000474421 SPATA17Q96L03 361 aa21.77■■□□□ 1.08
PDLIM4-206ENST00000474421 FAM83CQ9BQN1 747 aa21.77■■□□□ 1.08
PDLIM4-206ENST00000474421 EPC1Q9H2F5 836 aa21.77■■□□□ 1.08
PDLIM4-206ENST00000474421 GKN1Q9NS71 199 aa21.77■■□□□ 1.08
PDLIM4-206ENST00000474421 EXOC1Q9NV70 894 aa21.77■■□□□ 1.08
PDLIM4-206ENST00000474421 EHD2Q9NZN4 543 aa21.77■■□□□ 1.08
PDLIM4-206ENST00000474421 SERTAD1Q9UHV2 236 aa21.77■■□□□ 1.08
PDLIM4-206ENST00000474421 HCRTO43612 131 aa21.76■■□□□ 1.07
PDLIM4-206ENST00000474421 STAU1O95793 577 aaKnown RBP21.76■■□□□ 1.07
PDLIM4-206ENST00000474421 MYL1P05976 194 aa21.76■■□□□ 1.07
PDLIM4-206ENST00000474421 TDGF1P13385 188 aa21.76■■□□□ 1.07
PDLIM4-206ENST00000474421 CMA1P23946 247 aa21.76■■□□□ 1.07
PDLIM4-206ENST00000474421 ATICP31939 592 aa21.76■■□□□ 1.07
PDLIM4-206ENST00000474421 GNL1P36915 607 aaPredicted RBP21.76■■□□□ 1.07
PDLIM4-206ENST00000474421 AP3M2P53677 418 aa21.76■■□□□ 1.07
PDLIM4-206ENST00000474421 PSMC1P62191 440 aaKnown RBP21.76■■□□□ 1.07
PDLIM4-206ENST00000474421 TNK2Q07912 1038 aa21.76■■□□□ 1.07
PDLIM4-206ENST00000474421 TTC8Q8TAM2 541 aa21.76■■□□□ 1.07
PDLIM4-206ENST00000474421 MYCBPAPQ8TBZ2 947 aa21.76■■□□□ 1.07
PDLIM4-206ENST00000474421 MYLPFQ96A32 169 aa21.76■■□□□ 1.07
PDLIM4-206ENST00000474421 SYAP1Q96A49 352 aaPredicted RBP21.76■■□□□ 1.07
PDLIM4-206ENST00000474421 PAGE5Q96GU1 130 aa21.76■■□□□ 1.07
PDLIM4-206ENST00000474421 NCDNQ9UBB6 729 aa21.76■■□□□ 1.07
PDLIM4-206ENST00000474421 PTPRDP23468 1912 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms