RNA–Protein interactions for RNA: ENST00000474409.1

CNN3-205, Transcript of calponin 3, humanhuman

TSL 3

Gene CNN3, Length 544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-205ENST00000474409 NDUFV1P49821 464 aa8.84□□□□□ -0.99
CNN3-205ENST00000474409 BCAT1P54687 386 aa8.84□□□□□ -0.99
CNN3-205ENST00000474409 SLC8A3P57103 927 aa8.84□□□□□ -0.99
CNN3-205ENST00000474409 SMAD3P84022 425 aaKnown RBP8.84□□□□□ -0.99
CNN3-205ENST00000474409 FMO1Q01740 532 aa8.84□□□□□ -0.99
CNN3-205ENST00000474409 ROR1Q01973 937 aa8.84□□□□□ -0.99
CNN3-205ENST00000474409 GFPT1Q06210 699 aaPredicted RBP8.84□□□□□ -0.99
CNN3-205ENST00000474409 GPM6BQ13491 265 aa8.84□□□□□ -0.99
CNN3-205ENST00000474409 MRPL58Q14197 206 aaKnown RBP8.84□□□□□ -0.99
CNN3-205ENST00000474409 SMC1AQ14683 1233 aaKnown RBP8.84□□□□□ -0.99
CNN3-205ENST00000474409 SPA17Q15506 151 aa8.84□□□□□ -0.99
CNN3-205ENST00000474409 PTPN14Q15678 1187 aa8.84□□□□□ -0.99
CNN3-205ENST00000474409 NFE2Q16621 373 aaPredicted RBP8.84□□□□□ -0.99
CNN3-205ENST00000474409 PPP1R26Q5T8A7 1209 aaPredicted RBP8.84□□□□□ -0.99
CNN3-205ENST00000474409 KIAA0319Q5VV43 1072 aa8.84□□□□□ -0.99
CNN3-205ENST00000474409 ARHGAP17Q68EM7 881 aa8.84□□□□□ -0.99
CNN3-205ENST00000474409 TRIM72Q6ZMU5 477 aa8.84□□□□□ -0.99
CNN3-205ENST00000474409 FAM35AQ86V20 835 aa8.84□□□□□ -0.99
CNN3-205ENST00000474409 CCDC170Q8IYT3 715 aa8.84□□□□□ -0.99
CNN3-205ENST00000474409 CRYBG2Q8N1P7 616 aa8.84□□□□□ -0.99
CNN3-205ENST00000474409 LNX1Q8TBB1 728 aaPredicted RBP8.84□□□□□ -0.99
CNN3-205ENST00000474409 MYCBPAPQ8TBZ2 947 aa8.84□□□□□ -0.99
CNN3-205ENST00000474409 GDPD5Q8WTR4 605 aa8.84□□□□□ -0.99
CNN3-205ENST00000474409 AUTS2Q8WXX7 1259 aa8.84□□□□□ -0.99
CNN3-205ENST00000474409 TFAP2BQ92481 460 aa8.84□□□□□ -0.99
CNN3-205ENST00000474409 SMARCD1Q96GM5 515 aa8.84□□□□□ -0.99
CNN3-205ENST00000474409 PCED1BQ96HM7 432 aa8.84□□□□□ -0.99
CNN3-205ENST00000474409 ZNF830Q96NB3 372 aaPredicted RBP8.84□□□□□ -0.99
CNN3-205ENST00000474409 PGLYRP2Q96PD5 576 aa8.84□□□□□ -0.99
CNN3-205ENST00000474409 LPIN3Q9BQK8 851 aa8.84□□□□□ -0.99
CNN3-205ENST00000474409 KCNF1Q9H3M0 494 aa8.84□□□□□ -0.99
CNN3-205ENST00000474409 LUC7LQ9NQ29 371 aaKnown RBP8.84□□□□□ -0.99
CNN3-205ENST00000474409 CHST7Q9NS84 486 aa8.84□□□□□ -0.99
CNN3-205ENST00000474409 SPTLC3Q9NUV7 552 aa8.84□□□□□ -0.99
CNN3-205ENST00000474409 GTF3C4Q9UKN8 822 aa8.84□□□□□ -0.99
CNN3-205ENST00000474409 PCDHGC3Q9UN70 934 aa8.84□□□□□ -0.99
CNN3-205ENST00000474409 BACE2Q9Y5Z0 518 aa8.84□□□□□ -0.99
CNN3-205ENST00000474409 PRRC2BQ5JSZ5 2229 aaKnown RBP8.84□□□□□ -0.99
CNN3-205ENST00000474409 FAM170AA1A519 330 aa8.83□□□□□ -1
CNN3-205ENST00000474409 TMCO5BA8MYB1 307 aa8.83□□□□□ -1
CNN3-205ENST00000474409 H3BNC9 293 aa8.83□□□□□ -1
CNN3-205ENST00000474409 CLDN5O00501 218 aa8.83□□□□□ -1
CNN3-205ENST00000474409 GRM6O15303 877 aa8.83□□□□□ -1
CNN3-205ENST00000474409 AP1G2O75843 785 aa8.83□□□□□ -1
CNN3-205ENST00000474409 NDUFA10O95299 355 aa8.83□□□□□ -1
CNN3-205ENST00000474409 LSM8O95777 96 aaKnown RBP8.83□□□□□ -1
CNN3-205ENST00000474409 ADH1AP07327 375 aa8.83□□□□□ -1
CNN3-205ENST00000474409 NPR3P17342 541 aa8.83□□□□□ -1
CNN3-205ENST00000474409 CHRNB2P17787 502 aa8.83□□□□□ -1
CNN3-205ENST00000474409 OR1D2P34982 312 aa8.83□□□□□ -1
CNN3-205ENST00000474409 NSFP46459 744 aaKnown RBP8.83□□□□□ -1
CNN3-205ENST00000474409 CDR1P51861 262 aa8.83□□□□□ -1
CNN3-205ENST00000474409 BST2Q10589 180 aaKnown RBP8.83□□□□□ -1
CNN3-205ENST00000474409 SMARCB1Q12824 385 aa8.83□□□□□ -1
CNN3-205ENST00000474409 MTF1Q14872 753 aa8.83□□□□□ -1
CNN3-205ENST00000474409 CNGA2Q16280 664 aa8.83□□□□□ -1
CNN3-205ENST00000474409 SLC18A3Q16572 532 aa8.83□□□□□ -1
CNN3-205ENST00000474409 NAA35Q5VZE5 725 aa8.83□□□□□ -1
CNN3-205ENST00000474409 SLC8B1Q6J4K2 584 aa8.83□□□□□ -1
CNN3-205ENST00000474409 PPP1R2P3Q6NXS1 205 aa8.83□□□□□ -1
CNN3-205ENST00000474409 FAM171BQ6P995 826 aa8.83□□□□□ -1
CNN3-205ENST00000474409 LCLAT1Q6UWP7 414 aa8.83□□□□□ -1
CNN3-205ENST00000474409 RAD9BQ6WBX8 426 aa8.83□□□□□ -1
CNN3-205ENST00000474409 FUKQ8N0W3 1084 aa8.83□□□□□ -1
CNN3-205ENST00000474409 TMEM35BQ8NCS4 154 aa8.83□□□□□ -1
CNN3-205ENST00000474409 MSANTD4Q8NCY6 345 aa8.83□□□□□ -1
CNN3-205ENST00000474409 C1orf131Q8NDD1 294 aaKnown RBP8.83□□□□□ -1
CNN3-205ENST00000474409 SPPL3Q8TCT6 385 aa8.83□□□□□ -1
CNN3-205ENST00000474409 SPPL2BQ8TCT7 592 aa8.83□□□□□ -1
CNN3-205ENST00000474409 MICAL1Q8TDZ2 1067 aa8.83□□□□□ -1
CNN3-205ENST00000474409 IPO4Q8TEX9 1081 aaKnown RBP8.83□□□□□ -1
CNN3-205ENST00000474409 DDX1Q92499 740 aaKnown RBP8.83□□□□□ -1
CNN3-205ENST00000474409 SECISBP2LQ93073 1101 aaKnown RBP8.83□□□□□ -1
CNN3-205ENST00000474409 NOX5Q96PH1 765 aa8.83□□□□□ -1
CNN3-205ENST00000474409 PKMYT1Q99640 499 aa8.83□□□□□ -1
CNN3-205ENST00000474409 HNRNPABQ99729 332 aaKnown RBP8.83□□□□□ -1
CNN3-205ENST00000474409 EMILIN2Q9BXX0 1053 aa8.83□□□□□ -1
CNN3-205ENST00000474409 B3GNT5Q9BYG0 378 aa8.83□□□□□ -1
CNN3-205ENST00000474409 ZNF518BQ9C0D4 1074 aa8.83□□□□□ -1
CNN3-205ENST00000474409 PRO3102Q9H379 93 aa8.83□□□□□ -1
CNN3-205ENST00000474409 SYNCQ9H7C4 482 aa8.83□□□□□ -1
CNN3-205ENST00000474409 TMLHEQ9NVH6 421 aa8.83□□□□□ -1
CNN3-205ENST00000474409 ADAMTS1Q9UHI8 967 aa8.83□□□□□ -1
CNN3-205ENST00000474409 PCDHB5Q9Y5E4 795 aa8.83□□□□□ -1
CNN3-205ENST00000474409 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.83□□□□□ -1
CNN3-205ENST00000474409 LAMA2P24043 3122 aaKnown RBP8.83□□□□□ -1
CNN3-205ENST00000474409 MIA3Q5JRA6 1907 aa8.83□□□□□ -1
CNN3-205ENST00000474409 LAMA3Q16787 3333 aa8.83□□□□□ -1
CNN3-205ENST00000474409 KIF26AQ9ULI4 1882 aaPredicted RBP8.83□□□□□ -1
CNN3-205ENST00000474409 DOCK4Q8N1I0 1966 aa8.82□□□□□ -1
CNN3-205ENST00000474409 CDH23Q9H251 3354 aa8.82□□□□□ -1
CNN3-205ENST00000474409 DOCK8Q8NF50 2099 aa8.82□□□□□ -1
CNN3-205ENST00000474409 A0A087X0T9 212 aa8.82□□□□□ -1
CNN3-205ENST00000474409 WDR27A2RRH5 827 aa8.82□□□□□ -1
CNN3-205ENST00000474409 MTMR11A4FU01 709 aa8.82□□□□□ -1
CNN3-205ENST00000474409 EIF3CLB5ME19 914 aaKnown RBP8.82□□□□□ -1
CNN3-205ENST00000474409 DDX3XO00571 662 aaKnown RBP eCLIP8.82□□□□□ -1
CNN3-205ENST00000474409 TEX28O15482 410 aa8.82□□□□□ -1
CNN3-205ENST00000474409 CFHP08603 1231 aa8.82□□□□□ -1
CNN3-205ENST00000474409 FAM228BP0C875 321 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms