RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 FOXP1Q9H334 677 aaPredicted RBP5.56□□□□□ -1.52
SNRNP40-204ENST00000474025 KIF9Q9HAQ2 790 aa5.56□□□□□ -1.52
SNRNP40-204ENST00000474025 LRWD1Q9UFC0 647 aa5.56□□□□□ -1.52
SNRNP40-204ENST00000474025 EBF1Q9UH73 591 aa5.56□□□□□ -1.52
SNRNP40-204ENST00000474025 ZMYM5Q9UJ78 669 aa5.56□□□□□ -1.52
SNRNP40-204ENST00000474025 TBX20Q9UMR3 447 aa5.56□□□□□ -1.52
SNRNP40-204ENST00000474025 UBQLN1Q9UMX0 589 aaKnown RBP5.56□□□□□ -1.52
SNRNP40-204ENST00000474025 DNM3Q9UQ16 869 aa5.56□□□□□ -1.52
SNRNP40-204ENST00000474025 GON4LQ3T8J9 2241 aa5.56□□□□□ -1.52
SNRNP40-204ENST00000474025 APC2O95996 2303 aa5.56□□□□□ -1.52
SNRNP40-204ENST00000474025 TENM4Q6N022 2769 aa5.55□□□□□ -1.52
SNRNP40-204ENST00000474025 NUP205Q92621 2012 aa5.55□□□□□ -1.52
SNRNP40-204ENST00000474025 MGAQ8IWI9 3026 aa5.55□□□□□ -1.52
SNRNP40-204ENST00000474025 ANO9A1A5B4 782 aa5.55□□□□□ -1.52
SNRNP40-204ENST00000474025 RCCD1A6NED2 376 aa5.55□□□□□ -1.52
SNRNP40-204ENST00000474025 PATE3B3GLJ2 98 aa5.55□□□□□ -1.52
SNRNP40-204ENST00000474025 TAF4O00268 1085 aa5.55□□□□□ -1.52
SNRNP40-204ENST00000474025 XPOTO43592 962 aaKnown RBP5.55□□□□□ -1.52
SNRNP40-204ENST00000474025 TADA3O75528 432 aa5.55□□□□□ -1.52
SNRNP40-204ENST00000474025 F11P03951 625 aa5.55□□□□□ -1.52
SNRNP40-204ENST00000474025 CEACAM1P13688 526 aa5.55□□□□□ -1.52
SNRNP40-204ENST00000474025 PLS3P13797 630 aa5.55□□□□□ -1.52
SNRNP40-204ENST00000474025 HMGA1P17096 107 aaKnown RBP5.55□□□□□ -1.52
SNRNP40-204ENST00000474025 CSRP1P21291 193 aaKnown RBP5.55□□□□□ -1.52
SNRNP40-204ENST00000474025 PAX3P23760 479 aa5.55□□□□□ -1.52
SNRNP40-204ENST00000474025 DDX6P26196 483 aaKnown RBP eCLIP5.55□□□□□ -1.52
SNRNP40-204ENST00000474025 CDC25AP30304 524 aa5.55□□□□□ -1.52
SNRNP40-204ENST00000474025 GJA4P35212 333 aa5.55□□□□□ -1.52
SNRNP40-204ENST00000474025 AVPR1AP37288 418 aa5.55□□□□□ -1.52
SNRNP40-204ENST00000474025 MATR3P43243 847 aaKnown RBP eCLIP5.55□□□□□ -1.52
SNRNP40-204ENST00000474025 TRAPPC10P48553 1259 aa5.55□□□□□ -1.52
SNRNP40-204ENST00000474025 TUFMP49411 452 aaKnown RBP5.55□□□□□ -1.52
SNRNP40-204ENST00000474025 GALK1P51570 392 aa5.55□□□□□ -1.52
SNRNP40-204ENST00000474025 NLRP12P59046 1061 aa5.55□□□□□ -1.52
SNRNP40-204ENST00000474025 AMPD2Q01433 879 aa5.55□□□□□ -1.52
SNRNP40-204ENST00000474025 RING1Q06587 406 aa5.55□□□□□ -1.52
SNRNP40-204ENST00000474025 RAD51AP2Q09MP3 1159 aa5.55□□□□□ -1.52
SNRNP40-204ENST00000474025 BFSP1Q12934 665 aa5.55□□□□□ -1.52
SNRNP40-204ENST00000474025 PDIA5Q14554 519 aa5.55□□□□□ -1.52
SNRNP40-204ENST00000474025 DMC1Q14565 340 aa5.55□□□□□ -1.52
SNRNP40-204ENST00000474025 ZNF268Q14587 947 aaPredicted RBP5.55□□□□□ -1.52
SNRNP40-204ENST00000474025 PDGFRLQ15198 375 aa5.55□□□□□ -1.52
SNRNP40-204ENST00000474025 IL17AQ16552 155 aa5.55□□□□□ -1.52
SNRNP40-204ENST00000474025 SPATA1Q5VX52 437 aa5.55□□□□□ -1.52
SNRNP40-204ENST00000474025 C9orf57Q5W0N0 161 aa5.55□□□□□ -1.52
SNRNP40-204ENST00000474025 ARMCX5Q6P1M9 558 aa5.55□□□□□ -1.52
SNRNP40-204ENST00000474025 MAB21L3Q8N8X9 362 aa5.55□□□□□ -1.52
SNRNP40-204ENST00000474025 GIPC2Q8TF65 315 aa5.55□□□□□ -1.52
SNRNP40-204ENST00000474025 ZCCHC14Q8WYQ9 949 aaKnown RBP5.55□□□□□ -1.52
SNRNP40-204ENST00000474025 KCNN1Q92952 543 aa5.55□□□□□ -1.52
SNRNP40-204ENST00000474025 ACDQ96AP0 544 aa5.55□□□□□ -1.52
SNRNP40-204ENST00000474025 TSPAN18Q96SJ8 248 aa5.55□□□□□ -1.52
SNRNP40-204ENST00000474025 P2RY13Q9BPV8 354 aa5.55□□□□□ -1.52
SNRNP40-204ENST00000474025 MMTAG2Q9BU76 263 aaKnown RBP5.55□□□□□ -1.52
SNRNP40-204ENST00000474025 TMEM9BQ9NQ34 198 aa5.55□□□□□ -1.52
SNRNP40-204ENST00000474025 TDP1Q9NUW8 608 aa5.55□□□□□ -1.52
SNRNP40-204ENST00000474025 PCDHB3Q9Y5E6 796 aa5.55□□□□□ -1.52
SNRNP40-204ENST00000474025 ACACAQ13085 2346 aa5.54□□□□□ -1.52
SNRNP40-204ENST00000474025 PCNX2A6NKB5 2137 aa5.54□□□□□ -1.52
SNRNP40-204ENST00000474025 COL12A1Q99715 3063 aa5.54□□□□□ -1.52
SNRNP40-204ENST00000474025 MYO16Q9Y6X6 1858 aa5.54□□□□□ -1.52
SNRNP40-204ENST00000474025 KIAA1549LQ6ZVL6 1849 aa5.54□□□□□ -1.52
SNRNP40-204ENST00000474025 PIRO00625 290 aa5.54□□□□□ -1.52
SNRNP40-204ENST00000474025 HNRNPDLO14979 420 aaKnown RBP5.54□□□□□ -1.52
SNRNP40-204ENST00000474025 KHNYNO15037 678 aaKnown RBP5.54□□□□□ -1.52
SNRNP40-204ENST00000474025 OGTO15294 1046 aa5.54□□□□□ -1.52
SNRNP40-204ENST00000474025 ACTN4O43707 911 aaKnown RBP5.54□□□□□ -1.52
SNRNP40-204ENST00000474025 HYAL3O43820 417 aaPredicted RBP5.54□□□□□ -1.52
SNRNP40-204ENST00000474025 PIGRP01833 764 aa5.54□□□□□ -1.52
SNRNP40-204ENST00000474025 NFICP08651 508 aa5.54□□□□□ -1.52
SNRNP40-204ENST00000474025 HAPLN1P10915 354 aaPredicted RBP5.54□□□□□ -1.52
SNRNP40-204ENST00000474025 BCKDHBP21953 392 aa5.54□□□□□ -1.52
SNRNP40-204ENST00000474025 GBP1P32455 592 aa5.54□□□□□ -1.52
SNRNP40-204ENST00000474025 TOB1P50616 345 aaPredicted RBP5.54□□□□□ -1.52
SNRNP40-204ENST00000474025 DGKEP52429 567 aa5.54□□□□□ -1.52
SNRNP40-204ENST00000474025 SMTNP53814 917 aa5.54□□□□□ -1.52
SNRNP40-204ENST00000474025 SLC12A3P55017 1021 aa5.54□□□□□ -1.52
SNRNP40-204ENST00000474025 NCKAP1LP55160 1127 aa5.54□□□□□ -1.52
SNRNP40-204ENST00000474025 COPS2P61201 443 aa5.54□□□□□ -1.52
SNRNP40-204ENST00000474025 IRX4P78413 519 aa5.54□□□□□ -1.52
SNRNP40-204ENST00000474025 SMARCB1Q12824 385 aa5.54□□□□□ -1.52
SNRNP40-204ENST00000474025 USP4Q13107 963 aa5.54□□□□□ -1.52
SNRNP40-204ENST00000474025 MTF1Q14872 753 aa5.54□□□□□ -1.52
SNRNP40-204ENST00000474025 ZNF77Q15935 545 aa5.54□□□□□ -1.52
SNRNP40-204ENST00000474025 TAF12Q16514 161 aa5.54□□□□□ -1.52
SNRNP40-204ENST00000474025 KYAT1Q16773 422 aa5.54□□□□□ -1.52
SNRNP40-204ENST00000474025 EML3Q32P44 896 aa5.54□□□□□ -1.52
SNRNP40-204ENST00000474025 USP39Q53GS9 565 aaKnown RBP5.54□□□□□ -1.52
SNRNP40-204ENST00000474025 KRT79Q5XKE5 535 aa5.54□□□□□ -1.52
SNRNP40-204ENST00000474025 WSCD1Q658N2 575 aa5.54□□□□□ -1.52
SNRNP40-204ENST00000474025 TXNDC8Q6A555 127 aa5.54□□□□□ -1.52
SNRNP40-204ENST00000474025 JADE1Q6IE81 842 aa5.54□□□□□ -1.52
SNRNP40-204ENST00000474025 ANO7Q6IWH7 933 aa5.54□□□□□ -1.52
SNRNP40-204ENST00000474025 KIAA1211LQ6NV74 962 aa5.54□□□□□ -1.52
SNRNP40-204ENST00000474025 CC2D1AQ6P1N0 951 aaPredicted RBP5.54□□□□□ -1.52
SNRNP40-204ENST00000474025 CYP2U1Q7Z449 544 aa5.54□□□□□ -1.52
SNRNP40-204ENST00000474025 C11orf74Q86VG3 221 aa5.54□□□□□ -1.52
SNRNP40-204ENST00000474025 LRRTM3Q86VH5 581 aa5.54□□□□□ -1.52
SNRNP40-204ENST00000474025 MON1AQ86VX9 555 aa5.54□□□□□ -1.52
SNRNP40-204ENST00000474025 RASSF3Q86WH2 238 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms