RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 PCSK1NQ9UHG2 260 aa5.41□□□□□ -1.54
TMEM39A-206ENST00000473684 PCOLCE2Q9UKZ9 415 aa5.41□□□□□ -1.54
TMEM39A-206ENST00000473684 TELO2Q9Y4R8 837 aa5.41□□□□□ -1.54
TMEM39A-206ENST00000473684 CLIC4Q9Y696 253 aa5.41□□□□□ -1.54
TMEM39A-206ENST00000473684 MROH7-TTC4A0A0A0MT08 1334 aa5.41□□□□□ -1.54
TMEM39A-206ENST00000473684 SALL1Q9NSC2 1324 aa5.41□□□□□ -1.54
TMEM39A-206ENST00000473684 MYH8P13535 1937 aa5.41□□□□□ -1.54
TMEM39A-206ENST00000473684 DNAJC6O75061 913 aa5.41□□□□□ -1.54
TMEM39A-206ENST00000473684 CNOT3O75175 753 aaKnown RBP5.41□□□□□ -1.54
TMEM39A-206ENST00000473684 CLEC3AO75596 197 aa5.41□□□□□ -1.54
TMEM39A-206ENST00000473684 SHBGP04278 402 aa5.41□□□□□ -1.54
TMEM39A-206ENST00000473684 LDHCP07864 332 aa5.41□□□□□ -1.54
TMEM39A-206ENST00000473684 ZCCHC18P0CG32 403 aa5.41□□□□□ -1.54
TMEM39A-206ENST00000473684 MYBP10242 640 aa5.41□□□□□ -1.54
TMEM39A-206ENST00000473684 PRKACBP22694 351 aa5.41□□□□□ -1.54
TMEM39A-206ENST00000473684 GNA11P29992 359 aa5.41□□□□□ -1.54
TMEM39A-206ENST00000473684 TNNC1P63316 161 aa5.41□□□□□ -1.54
TMEM39A-206ENST00000473684 DR1Q01658 176 aa5.41□□□□□ -1.54
TMEM39A-206ENST00000473684 POU5F1Q01860 360 aaKnown RBP5.41□□□□□ -1.54
TMEM39A-206ENST00000473684 HSPA14Q0VDF9 509 aa5.41□□□□□ -1.54
TMEM39A-206ENST00000473684 HLTFQ14527 1009 aaKnown RBP eCLIP5.41□□□□□ -1.54
TMEM39A-206ENST00000473684 C15orf59Q2T9L4 293 aaPredicted RBP5.41□□□□□ -1.54
TMEM39A-206ENST00000473684 WDR72Q3MJ13 1102 aa5.41□□□□□ -1.54
TMEM39A-206ENST00000473684 HSP90AA4PQ58FG1 418 aa5.41□□□□□ -1.54
TMEM39A-206ENST00000473684 TMTC4Q5T4D3 741 aa5.41□□□□□ -1.54
TMEM39A-206ENST00000473684 MAP3K21Q5TCX8 1036 aa5.41□□□□□ -1.54
TMEM39A-206ENST00000473684 TDRD10Q5VZ19 366 aaKnown RBP5.41□□□□□ -1.54
TMEM39A-206ENST00000473684 SHISA2Q6UWI4 295 aa5.41□□□□□ -1.54
TMEM39A-206ENST00000473684 MORC4Q8TE76 937 aa5.41□□□□□ -1.54
TMEM39A-206ENST00000473684 HSPBAP1Q96EW2 488 aa5.41□□□□□ -1.54
TMEM39A-206ENST00000473684 PSTPIP2Q9H939 334 aa5.41□□□□□ -1.54
TMEM39A-206ENST00000473684 TYW1Q9NV66 732 aaKnown RBP5.41□□□□□ -1.54
TMEM39A-206ENST00000473684 SELENONQ9NZV5 590 aa5.41□□□□□ -1.54
TMEM39A-206ENST00000473684 UVRAGQ9P2Y5 699 aa5.41□□□□□ -1.54
TMEM39A-206ENST00000473684 ANGPTL2Q9UKU9 493 aa5.41□□□□□ -1.54
TMEM39A-206ENST00000473684 DSEQ9UL01 958 aa5.41□□□□□ -1.54
TMEM39A-206ENST00000473684 STXBP5LQ9Y2K9 1186 aa5.41□□□□□ -1.54
TMEM39A-206ENST00000473684 COMMD10Q9Y6G5 202 aa5.41□□□□□ -1.54
TMEM39A-206ENST00000473684 RFX7Q2KHR2 1363 aa5.41□□□□□ -1.54
TMEM39A-206ENST00000473684 LAMB1P07942 1786 aa5.4□□□□□ -1.54
TMEM39A-206ENST00000473684 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.4□□□□□ -1.54
TMEM39A-206ENST00000473684 FUOMA2VDF0 154 aa5.4□□□□□ -1.54
TMEM39A-206ENST00000473684 ANKRD34BA5PLL1 514 aa5.4□□□□□ -1.54
TMEM39A-206ENST00000473684 H0Y3Z8 333 aa5.4□□□□□ -1.54
TMEM39A-206ENST00000473684 ELL2O00472 640 aaPredicted RBP5.4□□□□□ -1.54
TMEM39A-206ENST00000473684 BAIAP3O94812 1187 aa5.4□□□□□ -1.54
TMEM39A-206ENST00000473684 FARP2O94887 1054 aaPredicted RBP5.4□□□□□ -1.54
TMEM39A-206ENST00000473684 LRIG2O94898 1065 aa5.4□□□□□ -1.54
TMEM39A-206ENST00000473684 TP53P04637 393 aaPredicted RBP5.4□□□□□ -1.54
TMEM39A-206ENST00000473684 MARK3P27448 753 aa5.4□□□□□ -1.54
TMEM39A-206ENST00000473684 PPARGP37231 505 aaPredicted RBP5.4□□□□□ -1.54
TMEM39A-206ENST00000473684 BCAP31P51572 246 aa5.4□□□□□ -1.54
TMEM39A-206ENST00000473684 HSD17B4P51659 736 aa5.4□□□□□ -1.54
TMEM39A-206ENST00000473684 CCR3P51677 355 aa5.4□□□□□ -1.54
TMEM39A-206ENST00000473684 NAA20P61599 178 aa5.4□□□□□ -1.54
TMEM39A-206ENST00000473684 CYTH1Q15438 398 aa5.4□□□□□ -1.54
TMEM39A-206ENST00000473684 TCEA2Q15560 299 aa5.4□□□□□ -1.54
TMEM39A-206ENST00000473684 MEA1Q16626 185 aa5.4□□□□□ -1.54
TMEM39A-206ENST00000473684 SLC9C2Q5TAH2 1124 aa5.4□□□□□ -1.54
TMEM39A-206ENST00000473684 BORAQ6PGQ7 559 aa5.4□□□□□ -1.54
TMEM39A-206ENST00000473684 DHRS4L2Q6PKH6 230 aa5.4□□□□□ -1.54
TMEM39A-206ENST00000473684 LVRNQ6Q4G3 990 aa5.4□□□□□ -1.54
TMEM39A-206ENST00000473684 INTS8Q75QN2 995 aaKnown RBP5.4□□□□□ -1.54
TMEM39A-206ENST00000473684 LURAP1LQ8IV03 231 aa5.4□□□□□ -1.54
TMEM39A-206ENST00000473684 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.4□□□□□ -1.54
TMEM39A-206ENST00000473684 MFSD2AQ8NA29 543 aa5.4□□□□□ -1.54
TMEM39A-206ENST00000473684 MDM1Q8TC05 714 aa5.4□□□□□ -1.54
TMEM39A-206ENST00000473684 DYDC2Q96IM9 177 aa5.4□□□□□ -1.54
TMEM39A-206ENST00000473684 DNAJC1Q96KC8 554 aaKnown RBP5.4□□□□□ -1.54
TMEM39A-206ENST00000473684 SPATA17Q96L03 361 aa5.4□□□□□ -1.54
TMEM39A-206ENST00000473684 UBAC1Q9BSL1 405 aa5.4□□□□□ -1.54
TMEM39A-206ENST00000473684 DENND2DQ9H6A0 471 aaPredicted RBP5.4□□□□□ -1.54
TMEM39A-206ENST00000473684 USP29Q9HBJ7 922 aa5.4□□□□□ -1.54
TMEM39A-206ENST00000473684 SSU72Q9NP77 194 aaKnown RBP5.4□□□□□ -1.54
TMEM39A-206ENST00000473684 CNGB3Q9NQW8 809 aa5.4□□□□□ -1.54
TMEM39A-206ENST00000473684 FAM86C1Q9NVL1 165 aa5.4□□□□□ -1.54
TMEM39A-206ENST00000473684 GIN1Q9NXP7 522 aa5.4□□□□□ -1.54
TMEM39A-206ENST00000473684 STK39Q9UEW8 545 aa5.4□□□□□ -1.54
TMEM39A-206ENST00000473684 LIMA1Q9UHB6 759 aaKnown RBP5.4□□□□□ -1.54
TMEM39A-206ENST00000473684 DMTF1Q9Y222 760 aa5.4□□□□□ -1.54
TMEM39A-206ENST00000473684 COQ6Q9Y2Z9 468 aa5.4□□□□□ -1.54
TMEM39A-206ENST00000473684 TAF1LQ8IZX4 1826 aa5.4□□□□□ -1.54
TMEM39A-206ENST00000473684 CCDC169A6NNP5 214 aa5.4□□□□□ -1.55
TMEM39A-206ENST00000473684 ERVV-2B6SEH9 535 aa5.4□□□□□ -1.55
TMEM39A-206ENST00000473684 CPLX1O14810 134 aa5.4□□□□□ -1.55
TMEM39A-206ENST00000473684 AP1G1O43747 822 aa5.4□□□□□ -1.55
TMEM39A-206ENST00000473684 AGTP01019 485 aa5.4□□□□□ -1.55
TMEM39A-206ENST00000473684 CHRNB1P11230 501 aa5.4□□□□□ -1.55
TMEM39A-206ENST00000473684 RPL5P46777 297 aaKnown RBP5.4□□□□□ -1.55
TMEM39A-206ENST00000473684 RXRGP48443 463 aa5.4□□□□□ -1.55
TMEM39A-206ENST00000473684 THOP1P52888 689 aa5.4□□□□□ -1.55
TMEM39A-206ENST00000473684 DSG1Q02413 1049 aa5.4□□□□□ -1.55
TMEM39A-206ENST00000473684 PPARAQ07869 468 aa5.4□□□□□ -1.55
TMEM39A-206ENST00000473684 CRY1Q16526 586 aa5.4□□□□□ -1.55
TMEM39A-206ENST00000473684 ZC3H12BQ5HYM0 836 aaKnown RBP5.4□□□□□ -1.55
TMEM39A-206ENST00000473684 SLC4A10Q6U841 1118 aa5.4□□□□□ -1.55
TMEM39A-206ENST00000473684 Q6ZS46 218 aa5.4□□□□□ -1.55
TMEM39A-206ENST00000473684 MIGA2Q7L4E1 593 aa5.4□□□□□ -1.55
TMEM39A-206ENST00000473684 FOXP4Q8IVH2 680 aaPredicted RBP5.4□□□□□ -1.55
TMEM39A-206ENST00000473684 LILRB1Q8NHL6 650 aaPredicted RBP5.4□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms