RNA–Protein interactions for RNA: ENST00000472397.5

SCAMP3-205, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-205ENST00000472397 ECT2Q9H8V3 914 aa10.87□□□□□ -0.67
SCAMP3-205ENST00000472397 ODF2LQ9ULJ1 636 aa10.87□□□□□ -0.67
SCAMP3-205ENST00000472397 CNOT1A5YKK6 2376 aaKnown RBP10.87□□□□□ -0.67
SCAMP3-205ENST00000472397 ZNF638Q14966 1978 aaKnown RBP10.86□□□□□ -0.67
SCAMP3-205ENST00000472397 TCHHQ07283 1943 aa10.86□□□□□ -0.67
SCAMP3-205ENST00000472397 CACNA1GO43497 2377 aa10.86□□□□□ -0.67
SCAMP3-205ENST00000472397 TRDMT1O14717 391 aaKnown RBP10.86□□□□□ -0.67
SCAMP3-205ENST00000472397 CAVIN2O95810 425 aa10.86□□□□□ -0.67
SCAMP3-205ENST00000472397 ABL1P00519 1130 aa10.86□□□□□ -0.67
SCAMP3-205ENST00000472397 PDGFRBP09619 1106 aa10.86□□□□□ -0.67
SCAMP3-205ENST00000472397 HOXB3P14651 431 aaPredicted RBP10.86□□□□□ -0.67
SCAMP3-205ENST00000472397 DHPSP49366 369 aaPredicted RBP10.86□□□□□ -0.67
SCAMP3-205ENST00000472397 NOVA1P51513 510 aaKnown RBP10.86□□□□□ -0.67
SCAMP3-205ENST00000472397 CASP5P51878 434 aa10.86□□□□□ -0.67
SCAMP3-205ENST00000472397 ZNF131P52739 623 aa10.86□□□□□ -0.67
SCAMP3-205ENST00000472397 GTF2BQ00403 316 aa10.86□□□□□ -0.67
SCAMP3-205ENST00000472397 TSPY1Q01534 308 aa10.86□□□□□ -0.67
SCAMP3-205ENST00000472397 IFRD2Q12894 506 aaPredicted RBP10.86□□□□□ -0.67
SCAMP3-205ENST00000472397 PTPAQ15257 358 aa10.86□□□□□ -0.67
SCAMP3-205ENST00000472397 SF3A1Q15459 793 aaKnown RBP10.86□□□□□ -0.67
SCAMP3-205ENST00000472397 KYAT1Q16773 422 aa10.86□□□□□ -0.67
SCAMP3-205ENST00000472397 SV2CQ496J9 727 aa10.86□□□□□ -0.67
SCAMP3-205ENST00000472397 PLA2G2CQ5R387 149 aa10.86□□□□□ -0.67
SCAMP3-205ENST00000472397 ANO7Q6IWH7 933 aa10.86□□□□□ -0.67
SCAMP3-205ENST00000472397 FAM173BQ6P4H8 233 aa10.86□□□□□ -0.67
SCAMP3-205ENST00000472397 C1orf228Q6PIY5 440 aa10.86□□□□□ -0.67
SCAMP3-205ENST00000472397 SPATA2LQ8IUW3 424 aaPredicted RBP10.86□□□□□ -0.67
SCAMP3-205ENST00000472397 CD302Q8IX05 232 aa10.86□□□□□ -0.67
SCAMP3-205ENST00000472397 SYNPOQ8N3V7 929 aa10.86□□□□□ -0.67
SCAMP3-205ENST00000472397 C1orf127Q8N9H9 656 aa10.86□□□□□ -0.67
SCAMP3-205ENST00000472397 SH3RF2Q8TEC5 729 aa10.86□□□□□ -0.67
SCAMP3-205ENST00000472397 CD101Q93033 1021 aa10.86□□□□□ -0.67
SCAMP3-205ENST00000472397 HPS3Q969F9 1004 aa10.86□□□□□ -0.67
SCAMP3-205ENST00000472397 CLIC6Q96NY7 704 aa10.86□□□□□ -0.67
SCAMP3-205ENST00000472397 SMPD4Q9NXE4 827 aa10.86□□□□□ -0.67
SCAMP3-205ENST00000472397 KCNG1Q9UIX4 513 aa10.86□□□□□ -0.67
SCAMP3-205ENST00000472397 DSEQ9UL01 958 aa10.86□□□□□ -0.67
SCAMP3-205ENST00000472397 SNX9Q9Y5X1 595 aa10.86□□□□□ -0.67
SCAMP3-205ENST00000472397 CLIC4Q9Y696 253 aa10.86□□□□□ -0.67
SCAMP3-205ENST00000472397 EML5Q05BV3 1969 aa10.86□□□□□ -0.67
SCAMP3-205ENST00000472397 ATXN2Q99700 1313 aaKnown RBP10.85□□□□□ -0.67
SCAMP3-205ENST00000472397 USP24Q9UPU5 2620 aa10.85□□□□□ -0.67
SCAMP3-205ENST00000472397 TRAV19A0A0A6YYK7 116 aa10.85□□□□□ -0.67
SCAMP3-205ENST00000472397 MYMKA6NI61 221 aa10.85□□□□□ -0.67
SCAMP3-205ENST00000472397 HUS1O60921 280 aa10.85□□□□□ -0.67
SCAMP3-205ENST00000472397 ATG13O75143 517 aa10.85□□□□□ -0.67
SCAMP3-205ENST00000472397 GCNT3O95395 438 aa10.85□□□□□ -0.67
SCAMP3-205ENST00000472397 APBB3O95704 486 aa10.85□□□□□ -0.67
SCAMP3-205ENST00000472397 CSH1P0DML2 217 aa10.85□□□□□ -0.67
SCAMP3-205ENST00000472397 CSH2P0DML3 217 aa10.85□□□□□ -0.67
SCAMP3-205ENST00000472397 IDEP14735 1019 aa10.85□□□□□ -0.67
SCAMP3-205ENST00000472397 HNRNPLP14866 589 aaKnown RBP eCLIP10.85□□□□□ -0.67
SCAMP3-205ENST00000472397 LMO2P25791 158 aa10.85□□□□□ -0.67
SCAMP3-205ENST00000472397 USP46P62068 366 aa10.85□□□□□ -0.67
SCAMP3-205ENST00000472397 MESP2Q0VG99 397 aa10.85□□□□□ -0.67
SCAMP3-205ENST00000472397 INTS6LQ5JSJ4 861 aaKnown RBP10.85□□□□□ -0.67
SCAMP3-205ENST00000472397 EMC10Q5UCC4 262 aa10.85□□□□□ -0.67
SCAMP3-205ENST00000472397 CPA6Q8N4T0 437 aa10.85□□□□□ -0.67
SCAMP3-205ENST00000472397 TSTD1Q8NFU3 115 aa10.85□□□□□ -0.67
SCAMP3-205ENST00000472397 LARP4BQ92615 738 aaKnown RBP10.85□□□□□ -0.67
SCAMP3-205ENST00000472397 PIGKQ92643 395 aa10.85□□□□□ -0.67
SCAMP3-205ENST00000472397 ELMO3Q96BJ8 720 aa10.85□□□□□ -0.67
SCAMP3-205ENST00000472397 CBWD1Q9BRT8 395 aa10.85□□□□□ -0.67
SCAMP3-205ENST00000472397 LSM14BQ9BX40 385 aaKnown RBP10.85□□□□□ -0.67
SCAMP3-205ENST00000472397 ASB7Q9H672 318 aa10.85□□□□□ -0.67
SCAMP3-205ENST00000472397 MRPL44Q9H9J2 332 aaKnown RBP10.85□□□□□ -0.67
SCAMP3-205ENST00000472397 PDE11AQ9HCR9 933 aa10.85□□□□□ -0.67
SCAMP3-205ENST00000472397 VPS45Q9NRW7 570 aa10.85□□□□□ -0.67
SCAMP3-205ENST00000472397 KCND2Q9NZV8 630 aa10.85□□□□□ -0.67
SCAMP3-205ENST00000472397 DERAQ9Y315 318 aa10.85□□□□□ -0.67
SCAMP3-205ENST00000472397 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.84□□□□□ -0.67
SCAMP3-205ENST00000472397 VPS37CA5D8V6 355 aaPredicted RBP10.84□□□□□ -0.67
SCAMP3-205ENST00000472397 ABCB7O75027 752 aa10.84□□□□□ -0.67
SCAMP3-205ENST00000472397 PRPF6O94906 941 aaKnown RBP10.84□□□□□ -0.67
SCAMP3-205ENST00000472397 HDCP19113 662 aa10.84□□□□□ -0.67
SCAMP3-205ENST00000472397 DRD1P21728 446 aa10.84□□□□□ -0.67
SCAMP3-205ENST00000472397 BDNFP23560 247 aa10.84□□□□□ -0.67
SCAMP3-205ENST00000472397 WEE1P30291 646 aa10.84□□□□□ -0.67
SCAMP3-205ENST00000472397 HOXA6P31267 233 aa10.84□□□□□ -0.67
SCAMP3-205ENST00000472397 TIE1P35590 1138 aa10.84□□□□□ -0.67
SCAMP3-205ENST00000472397 MAPK8P45983 427 aa10.84□□□□□ -0.67
SCAMP3-205ENST00000472397 ZXDBP98169 803 aa10.84□□□□□ -0.67
SCAMP3-205ENST00000472397 MYL7Q01449 175 aa10.84□□□□□ -0.67
SCAMP3-205ENST00000472397 CYP27A1Q02318 531 aa10.84□□□□□ -0.67
SCAMP3-205ENST00000472397 KDSRQ06136 332 aa10.84□□□□□ -0.67
SCAMP3-205ENST00000472397 ZNF252P-AS1Q0IIN9 211 aa10.84□□□□□ -0.67
SCAMP3-205ENST00000472397 PDGFRLQ15198 375 aa10.84□□□□□ -0.67
SCAMP3-205ENST00000472397 ELF2Q15723 593 aa10.84□□□□□ -0.67
SCAMP3-205ENST00000472397 ZNF77Q15935 545 aa10.84□□□□□ -0.67
SCAMP3-205ENST00000472397 EML3Q32P44 896 aa10.84□□□□□ -0.67
SCAMP3-205ENST00000472397 C8orf34Q49A92 452 aa10.84□□□□□ -0.67
SCAMP3-205ENST00000472397 SH3PXD2AQ5TCZ1 1133 aa10.84□□□□□ -0.67
SCAMP3-205ENST00000472397 LARP1BQ659C4 914 aaKnown RBP10.84□□□□□ -0.67
SCAMP3-205ENST00000472397 ARL6IP4Q66PJ3 421 aaKnown RBP10.84□□□□□ -0.67
SCAMP3-205ENST00000472397 SLFN12LQ6IEE8 588 aa10.84□□□□□ -0.67
SCAMP3-205ENST00000472397 ZNF720Q7Z2F6 126 aa10.84□□□□□ -0.67
SCAMP3-205ENST00000472397 TMEFF1Q8IYR6 380 aa10.84□□□□□ -0.67
SCAMP3-205ENST00000472397 SYCP3Q8IZU3 236 aa10.84□□□□□ -0.67
SCAMP3-205ENST00000472397 KRI1Q8N9T8 703 aaKnown RBP10.84□□□□□ -0.67
SCAMP3-205ENST00000472397 GLIS3Q8NEA6 775 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 168.7 ms