RNA–Protein interactions for RNA: ENST00000471538.1

SPEN-204, Transcript of spen family transcriptional repressor, humanhuman

TSL 2

Gene SPEN, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-204ENST00000471538 ARFGAP2Q8N6H7 521 aa6.78□□□□□ -1.32
SPEN-204ENST00000471538 C3orf20Q8ND61 904 aa6.78□□□□□ -1.32
SPEN-204ENST00000471538 CD99L2Q8TCZ2 262 aa6.78□□□□□ -1.32
SPEN-204ENST00000471538 GRK7Q8WTQ7 553 aa6.78□□□□□ -1.32
SPEN-204ENST00000471538 AFG1LQ8WV93 481 aa6.78□□□□□ -1.32
SPEN-204ENST00000471538 ARMC5Q96C12 935 aa6.78□□□□□ -1.32
SPEN-204ENST00000471538 PGM2Q96G03 612 aa6.78□□□□□ -1.32
SPEN-204ENST00000471538 SLITRK1Q96PX8 696 aa6.78□□□□□ -1.32
SPEN-204ENST00000471538 TWNKQ96RR1 684 aa6.78□□□□□ -1.32
SPEN-204ENST00000471538 OSBPL8Q9BZF1 889 aa6.78□□□□□ -1.32
SPEN-204ENST00000471538 SEMA4AQ9H3S1 761 aa6.78□□□□□ -1.32
SPEN-204ENST00000471538 ASB7Q9H672 318 aa6.78□□□□□ -1.32
SPEN-204ENST00000471538 HOMER3Q9NSC5 361 aa6.78□□□□□ -1.32
SPEN-204ENST00000471538 MTRF1LQ9UGC7 380 aaKnown RBP6.78□□□□□ -1.32
SPEN-204ENST00000471538 PTPN22Q9Y2R2 807 aa6.78□□□□□ -1.32
SPEN-204ENST00000471538 VCANP13611 3396 aa6.78□□□□□ -1.32
SPEN-204ENST00000471538 CCL15-CCL14A0A0B4J2E2 113 aa6.77□□□□□ -1.33
SPEN-204ENST00000471538 GRXCR2A6NFK2 248 aa6.77□□□□□ -1.33
SPEN-204ENST00000471538 C3orf70A6NLC5 250 aaPredicted RBP6.77□□□□□ -1.33
SPEN-204ENST00000471538 F8VP50 259 aa6.77□□□□□ -1.33
SPEN-204ENST00000471538 ADCY6O43306 1168 aa6.77□□□□□ -1.33
SPEN-204ENST00000471538 CAND2O75155 1236 aa6.77□□□□□ -1.33
SPEN-204ENST00000471538 CILPO75339 1184 aa6.77□□□□□ -1.33
SPEN-204ENST00000471538 SMPD1P17405 629 aa6.77□□□□□ -1.33
SPEN-204ENST00000471538 KLRC2P26717 231 aa6.77□□□□□ -1.33
SPEN-204ENST00000471538 CHKAP35790 457 aa6.77□□□□□ -1.33
SPEN-204ENST00000471538 GABRB2P47870 512 aa6.77□□□□□ -1.33
SPEN-204ENST00000471538 GCLCP48506 637 aaPredicted RBP6.77□□□□□ -1.33
SPEN-204ENST00000471538 CDH8P55286 799 aa6.77□□□□□ -1.33
SPEN-204ENST00000471538 COPS2P61201 443 aa6.77□□□□□ -1.33
SPEN-204ENST00000471538 PPP2R2AP63151 447 aa6.77□□□□□ -1.33
SPEN-204ENST00000471538 SLC25A11Q02978 314 aaKnown RBP6.77□□□□□ -1.33
SPEN-204ENST00000471538 INCA1Q0VD86 236 aa6.77□□□□□ -1.33
SPEN-204ENST00000471538 NFX1Q12986 1120 aaKnown RBP6.77□□□□□ -1.33
SPEN-204ENST00000471538 SNX1Q13596 522 aa6.77□□□□□ -1.33
SPEN-204ENST00000471538 PIGHQ14442 188 aaPredicted RBP6.77□□□□□ -1.33
SPEN-204ENST00000471538 SLC29A2Q14542 456 aa6.77□□□□□ -1.33
SPEN-204ENST00000471538 LLGL1Q15334 1064 aa6.77□□□□□ -1.33
SPEN-204ENST00000471538 PPP1R7Q15435 360 aa6.77□□□□□ -1.33
SPEN-204ENST00000471538 TAZQ16635 292 aa6.77□□□□□ -1.33
SPEN-204ENST00000471538 PTGISQ16647 500 aa6.77□□□□□ -1.33
SPEN-204ENST00000471538 CCL15Q16663 113 aa6.77□□□□□ -1.33
SPEN-204ENST00000471538 KYAT1Q16773 422 aa6.77□□□□□ -1.33
SPEN-204ENST00000471538 KRT71Q3SY84 523 aa6.77□□□□□ -1.33
SPEN-204ENST00000471538 DUSP28Q4G0W2 176 aa6.77□□□□□ -1.33
SPEN-204ENST00000471538 ATP13A4Q4VNC1 1196 aa6.77□□□□□ -1.33
SPEN-204ENST00000471538 ZNF667Q5HYK9 610 aa6.77□□□□□ -1.33
SPEN-204ENST00000471538 DENND2CQ68D51 928 aa6.77□□□□□ -1.33
SPEN-204ENST00000471538 TXNRD3NBQ6F5E7 133 aa6.77□□□□□ -1.33
SPEN-204ENST00000471538 MFSD5Q6N075 450 aa6.77□□□□□ -1.33
SPEN-204ENST00000471538 MFSD7Q6UXD7 560 aa6.77□□□□□ -1.33
SPEN-204ENST00000471538 TREML4Q6UXN2 200 aa6.77□□□□□ -1.33
SPEN-204ENST00000471538 NUDT18Q6ZVK8 323 aa6.77□□□□□ -1.33
SPEN-204ENST00000471538 TRMT10CQ7L0Y3 403 aaKnown RBP6.77□□□□□ -1.33
SPEN-204ENST00000471538 GPR142Q7Z601 462 aa6.77□□□□□ -1.33
SPEN-204ENST00000471538 HOOK3Q86VS8 718 aa6.77□□□□□ -1.33
SPEN-204ENST00000471538 RELL1Q8IUW5 271 aa6.77□□□□□ -1.33
SPEN-204ENST00000471538 RCOR2Q8IZ40 523 aa6.77□□□□□ -1.33
SPEN-204ENST00000471538 ARFGAP1Q8N6T3 406 aa6.77□□□□□ -1.33
SPEN-204ENST00000471538 SLC4A11Q8NBS3 891 aa6.77□□□□□ -1.33
SPEN-204ENST00000471538 ATL2Q8NHH9 583 aa6.77□□□□□ -1.33
SPEN-204ENST00000471538 BCAS4Q8TDM0 211 aa6.77□□□□□ -1.33
SPEN-204ENST00000471538 FNIP1Q8TF40 1166 aa6.77□□□□□ -1.33
SPEN-204ENST00000471538 SNF8Q96H20 258 aa6.77□□□□□ -1.33
SPEN-204ENST00000471538 CPB2Q96IY4 423 aa6.77□□□□□ -1.33
SPEN-204ENST00000471538 RBM41Q96IZ5 413 aaKnown RBP6.77□□□□□ -1.33
SPEN-204ENST00000471538 MAML3Q96JK9 1138 aa6.77□□□□□ -1.33
SPEN-204ENST00000471538 MCEEQ96PE7 176 aa6.77□□□□□ -1.33
SPEN-204ENST00000471538 HEMGNQ9BXL5 484 aa6.77□□□□□ -1.33
SPEN-204ENST00000471538 ELOVL4Q9GZR5 314 aa6.77□□□□□ -1.33
SPEN-204ENST00000471538 EPN3Q9H201 632 aa6.77□□□□□ -1.33
SPEN-204ENST00000471538 ADAM7Q9H2U9 754 aa6.77□□□□□ -1.33
SPEN-204ENST00000471538 CDC42EP4Q9H3Q1 356 aaKnown RBP6.77□□□□□ -1.33
SPEN-204ENST00000471538 FAM124BQ9H5Z6 455 aaPredicted RBP6.77□□□□□ -1.33
SPEN-204ENST00000471538 SMYD3Q9H7B4 428 aa6.77□□□□□ -1.33
SPEN-204ENST00000471538 CYP3A43Q9HB55 503 aa6.77□□□□□ -1.33
SPEN-204ENST00000471538 TJP2Q9UDY2 1190 aa6.77□□□□□ -1.33
SPEN-204ENST00000471538 HMGXB4Q9UGU5 601 aa6.77□□□□□ -1.33
SPEN-204ENST00000471538 STRIP2Q9ULQ0 834 aa6.77□□□□□ -1.33
SPEN-204ENST00000471538 NOVA2Q9UNW9 492 aaKnown RBP6.77□□□□□ -1.33
SPEN-204ENST00000471538 USTQ9Y2C2 406 aa6.77□□□□□ -1.33
SPEN-204ENST00000471538 C2CD2Q9Y426 696 aa6.77□□□□□ -1.33
SPEN-204ENST00000471538 IVNS1ABPQ9Y6Y0 642 aa6.77□□□□□ -1.33
SPEN-204ENST00000471538 PDCD11Q14690 1871 aaKnown RBP6.77□□□□□ -1.33
SPEN-204ENST00000471538 hCG_1818297A0A087WSY0 165 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 A0A1B0GUA9 196 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 SIGLEC16A6NMB1 481 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 H3BRB1 525 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 MED7O43513 233 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 LIASO43766 372 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 CSDE1O75534 798 aaKnown RBP6.76□□□□□ -1.33
SPEN-204ENST00000471538 MICAL2O94851 1124 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 GAS8O95995 478 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 VTNP04004 478 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 KRT1P04264 644 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 ERBB2P04626 1255 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 ITGB3P05106 788 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 CYP3A5P20815 502 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 FGFR4P22455 802 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 GRM5P41594 1212 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms