RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 LCE2BO14633 110 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 CASQ2O14958 399 aaPredicted RBP4.42□□□□□ -1.7
VPS50-210ENST00000471188 LRRN2O75325 713 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 FUCA1P04066 466 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 ALDH2P05091 517 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 C6orf222P0C671 652 aaPredicted RBP4.42□□□□□ -1.7
VPS50-210ENST00000471188 FAM58BPP0C7Q3 252 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 POLR2MP0CAP2 368 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 CALM1P0DP23 149 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 CALM2P0DP24 149 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 CALM3P0DP25 149 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 RBP3P10745 1247 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 FGFR1P11362 822 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 LMNB1P20700 586 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 COMTP21964 271 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 MUTP22033 750 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 TCEA1P23193 301 aaKnown RBP4.42□□□□□ -1.7
VPS50-210ENST00000471188 STIP1P31948 543 aaKnown RBP4.42□□□□□ -1.7
VPS50-210ENST00000471188 MAGEA4P43358 317 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 NPEPPSP55786 919 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 HNRNPDQ14103 355 aaKnown RBP4.42□□□□□ -1.7
VPS50-210ENST00000471188 GK3PQ14409 553 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 KRT72Q14CN4 511 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 AGERQ15109 404 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 ARSHQ5FYA8 562 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 PCNX4Q63HM2 1172 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 RETREG3Q86VR2 466 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 DGKHQ86XP1 1220 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 SLC13A5Q86YT5 568 aaPredicted RBP4.42□□□□□ -1.7
VPS50-210ENST00000471188 CLVS1Q8IUQ0 354 aaPredicted RBP4.42□□□□□ -1.7
VPS50-210ENST00000471188 ZDHHC14Q8IZN3 488 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 ZNF398Q8TD17 642 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 SNX29Q8TEQ0 813 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 C7orf43Q8WVR3 580 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 ANKRD36BP1Q96IX9 119 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 LRGUKQ96M69 825 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 AK8Q96MA6 479 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 CFAP57Q96MR6 1250 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 SENP6Q9GZR1 1112 aaPredicted RBP4.42□□□□□ -1.7
VPS50-210ENST00000471188 EHD1Q9H4M9 534 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 CAAP1Q9H8G2 361 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 GID8Q9NWU2 228 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 KANSL3Q9P2N6 904 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 MOSPD1Q9UJG1 213 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 CCPG1Q9ULG6 757 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 PCDHA4Q9UN74 947 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 ACTL7BQ9Y614 415 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 AP4B1Q9Y6B7 739 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 CNTNAP5Q8WYK1 1306 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 PCDH11YQ9BZA8 1340 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 BRWD3Q6RI45 1802 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 PVALEFA0A1B0GWK0 134 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 UNCXA6NJT0 531 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 NOTOA8MTQ0 251 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 MIF4GDA9UHW6 222 aaKnown RBP4.42□□□□□ -1.7
VPS50-210ENST00000471188 J3QRK9 145 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 GIPC1O14908 333 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 NMT2O60551 498 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 CIAO1O76071 339 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 TMEM253P0C7T8 217 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 ENDOUP21128 410 aaKnown RBP4.42□□□□□ -1.7
VPS50-210ENST00000471188 PON1P27169 355 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 MZF1P28698 734 aaPredicted RBP4.42□□□□□ -1.7
VPS50-210ENST00000471188 HMOX2P30519 316 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 HOXD13P35453 343 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 ALDH1A3P47895 512 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 PFKPQ01813 784 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 CYP4A11Q02928 519 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 TROAPQ12815 778 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 SPIDRQ14159 915 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 NR1D2Q14995 579 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 ADRM1Q16186 407 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 PFKFB3Q16875 520 aaPredicted RBP4.42□□□□□ -1.7
VPS50-210ENST00000471188 TRIM16LQ309B1 348 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 FAM47AQ5JRC9 791 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 SPDYAQ5MJ70 313 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 SYCP2LQ5T4T6 812 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 TMCO4Q5TGY1 634 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 SNRNP48Q6IEG0 339 aaKnown RBP4.42□□□□□ -1.7
VPS50-210ENST00000471188 PLEKHA7Q6IQ23 1121 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 ZNF746Q6NUN9 644 aaPredicted RBP4.42□□□□□ -1.7
VPS50-210ENST00000471188 NEPROQ6NW34 567 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 UTS2BQ765I0 119 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 THEMISQ8N1K5 641 aaPredicted RBP4.42□□□□□ -1.7
VPS50-210ENST00000471188 SAMD3Q8N6K7 520 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 LNX1Q8TBB1 728 aaPredicted RBP4.42□□□□□ -1.7
VPS50-210ENST00000471188 SHKBP1Q8TBC3 707 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 HELQQ8TDG4 1101 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 TCP10LQ8TDR4 215 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 HPS1Q92902 700 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 TMIGD2Q96BF3 282 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 FBXL8Q96CD0 374 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 BTBD6Q96KE9 485 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 NEURL2Q9BR09 285 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 TRIM56Q9BRZ2 755 aaKnown RBP4.42□□□□□ -1.7
VPS50-210ENST00000471188 GPAMQ9HCL2 828 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 CYLDQ9NQC7 956 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 CNGB3Q9NQW8 809 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 TAS2R14Q9NYV8 317 aa4.42□□□□□ -1.7
VPS50-210ENST00000471188 WHRNQ9P202 907 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms