RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 LARGE1O95461 756 aa6.41□□□□□ -1.38
VARS-222ENST00000470953 FAM87AP0C7U9 286 aa6.41□□□□□ -1.38
VARS-222ENST00000470953 ATP2B1P20020 1258 aa6.41□□□□□ -1.38
VARS-222ENST00000470953 CIITAP33076 1130 aa6.41□□□□□ -1.38
VARS-222ENST00000470953 HNF1BP35680 557 aa6.41□□□□□ -1.38
VARS-222ENST00000470953 HMGN5P82970 282 aaKnown RBP6.41□□□□□ -1.38
VARS-222ENST00000470953 PSMD2Q13200 908 aa6.41□□□□□ -1.38
VARS-222ENST00000470953 RUNX3Q13761 415 aa6.41□□□□□ -1.38
VARS-222ENST00000470953 MAP7D1Q3KQU3 841 aa6.41□□□□□ -1.38
VARS-222ENST00000470953 C8orf34Q49A92 452 aa6.41□□□□□ -1.38
VARS-222ENST00000470953 XKR3Q5GH77 459 aa6.41□□□□□ -1.38
VARS-222ENST00000470953 NOTUMQ6P988 496 aa6.41□□□□□ -1.38
VARS-222ENST00000470953 TMEM92Q6UXU6 159 aa6.41□□□□□ -1.38
VARS-222ENST00000470953 HAUS6Q7Z4H7 955 aa6.41□□□□□ -1.38
VARS-222ENST00000470953 PTRH1Q86Y79 214 aaKnown RBP6.41□□□□□ -1.38
VARS-222ENST00000470953 DHX40Q8IX18 779 aaKnown RBP6.41□□□□□ -1.38
VARS-222ENST00000470953 RNF149Q8NC42 400 aa6.41□□□□□ -1.38
VARS-222ENST00000470953 NSUN7Q8NE18 718 aaKnown RBP6.41□□□□□ -1.38
VARS-222ENST00000470953 BPIFB1Q8TDL5 484 aa6.41□□□□□ -1.38
VARS-222ENST00000470953 KCNE4Q8WWG9 221 aa6.41□□□□□ -1.38
VARS-222ENST00000470953 SPACA7Q96KW9 195 aa6.41□□□□□ -1.38
VARS-222ENST00000470953 ZSCAN31Q96LW9 406 aaPredicted RBP6.41□□□□□ -1.38
VARS-222ENST00000470953 RIT2Q99578 217 aa6.41□□□□□ -1.38
VARS-222ENST00000470953 CRISPLD1Q9H336 500 aa6.41□□□□□ -1.38
VARS-222ENST00000470953 GMIPQ9P107 970 aa6.41□□□□□ -1.38
VARS-222ENST00000470953 CCL26Q9Y258 94 aa6.41□□□□□ -1.38
VARS-222ENST00000470953 PLAAQ9Y263 795 aa6.41□□□□□ -1.38
VARS-222ENST00000470953 PLXND1Q9Y4D7 1925 aa6.4□□□□□ -1.38
VARS-222ENST00000470953 TNFSF14O43557 240 aa6.4□□□□□ -1.38
VARS-222ENST00000470953 NEMFO60524 1076 aa6.4□□□□□ -1.38
VARS-222ENST00000470953 DKC1O60832 514 aaKnown RBP eCLIP6.4□□□□□ -1.38
VARS-222ENST00000470953 DTNBO60941 627 aa6.4□□□□□ -1.38
VARS-222ENST00000470953 B3GAT3O94766 335 aa6.4□□□□□ -1.38
VARS-222ENST00000470953 ERLIN2O94905 339 aa6.4□□□□□ -1.38
VARS-222ENST00000470953 DRD1P21728 446 aa6.4□□□□□ -1.38
VARS-222ENST00000470953 CLCNKBP51801 687 aa6.4□□□□□ -1.38
VARS-222ENST00000470953 SEC13P55735 322 aa6.4□□□□□ -1.38
VARS-222ENST00000470953 CYP4F8P98187 520 aa6.4□□□□□ -1.38
VARS-222ENST00000470953 PLCB2Q00722 1185 aa6.4□□□□□ -1.38
VARS-222ENST00000470953 GUCY1B3Q02153 619 aa6.4□□□□□ -1.38
VARS-222ENST00000470953 ELAVL2Q12926 359 aaKnown RBP6.4□□□□□ -1.38
VARS-222ENST00000470953 NR5A1Q13285 461 aa6.4□□□□□ -1.38
VARS-222ENST00000470953 NCAPHQ15003 741 aa6.4□□□□□ -1.38
VARS-222ENST00000470953 CALCRLQ16602 461 aa6.4□□□□□ -1.38
VARS-222ENST00000470953 Q4G0T1 1027 aa6.4□□□□□ -1.38
VARS-222ENST00000470953 HES3Q5TGS1 186 aa6.4□□□□□ -1.38
VARS-222ENST00000470953 NCAPH2Q6IBW4 605 aa6.4□□□□□ -1.38
VARS-222ENST00000470953 MOXD1Q6UVY6 613 aa6.4□□□□□ -1.38
VARS-222ENST00000470953 RNF19BQ6ZMZ0 732 aa6.4□□□□□ -1.38
VARS-222ENST00000470953 DBX2Q6ZNG2 339 aa6.4□□□□□ -1.38
VARS-222ENST00000470953 ANKS3Q6ZW76 656 aa6.4□□□□□ -1.38
VARS-222ENST00000470953 RABEPKQ7Z6M1 372 aa6.4□□□□□ -1.38
VARS-222ENST00000470953 SFTPA1Q8IWL2 248 aa6.4□□□□□ -1.38
VARS-222ENST00000470953 DIS3L2Q8IYB7 885 aaKnown RBP6.4□□□□□ -1.38
VARS-222ENST00000470953 CCDC33Q8N5R6 958 aa6.4□□□□□ -1.38
VARS-222ENST00000470953 RDM1Q8NG50 284 aa6.4□□□□□ -1.38
VARS-222ENST00000470953 USP33Q8TEY7 942 aa6.4□□□□□ -1.38
VARS-222ENST00000470953 SLC5A5Q92911 643 aa6.4□□□□□ -1.38
VARS-222ENST00000470953 EXTL1Q92935 676 aa6.4□□□□□ -1.38
VARS-222ENST00000470953 ACDQ96AP0 544 aa6.4□□□□□ -1.38
VARS-222ENST00000470953 P2RY13Q9BPV8 354 aa6.4□□□□□ -1.38
VARS-222ENST00000470953 LLPHQ9BRT6 129 aaKnown RBP6.4□□□□□ -1.38
VARS-222ENST00000470953 TRIM6Q9C030 488 aaPredicted RBP6.4□□□□□ -1.38
VARS-222ENST00000470953 GPR88Q9GZN0 384 aa6.4□□□□□ -1.38
VARS-222ENST00000470953 GOLGA2P5Q9HBQ8 144 aa6.4□□□□□ -1.38
VARS-222ENST00000470953 TM7SF3Q9NS93 570 aa6.4□□□□□ -1.38
VARS-222ENST00000470953 GJB4Q9NTQ9 266 aa6.4□□□□□ -1.38
VARS-222ENST00000470953 DKK3Q9UBP4 350 aa6.4□□□□□ -1.38
VARS-222ENST00000470953 FBXL5Q9UKA1 691 aa6.4□□□□□ -1.38
VARS-222ENST00000470953 TBX20Q9UMR3 447 aa6.4□□□□□ -1.38
VARS-222ENST00000470953 NOL7Q9UMY1 257 aaKnown RBP6.4□□□□□ -1.38
VARS-222ENST00000470953 FNDC3AQ9Y2H6 1198 aaKnown RBP6.4□□□□□ -1.38
VARS-222ENST00000470953 SSUH2Q9Y2M2 353 aa6.4□□□□□ -1.38
VARS-222ENST00000470953 PHLPP2Q6ZVD8 1323 aa6.4□□□□□ -1.39
VARS-222ENST00000470953 NUP210Q8TEM1 1887 aaPredicted RBP6.39□□□□□ -1.39
VARS-222ENST00000470953 TTLL13PA6NNM8 815 aa6.39□□□□□ -1.39
VARS-222ENST00000470953 INO80B-WBP1J3KQ70 363 aa6.39□□□□□ -1.39
VARS-222ENST00000470953 K7EQS6 105 aa6.39□□□□□ -1.39
VARS-222ENST00000470953 TBX3O15119 743 aa6.39□□□□□ -1.39
VARS-222ENST00000470953 FLRT2O43155 660 aa6.39□□□□□ -1.39
VARS-222ENST00000470953 SLC37A4O43826 429 aa6.39□□□□□ -1.39
VARS-222ENST00000470953 SOAT2O75908 522 aa6.39□□□□□ -1.39
VARS-222ENST00000470953 CTDNEP1O95476 244 aa6.39□□□□□ -1.39
VARS-222ENST00000470953 THP07101 528 aa6.39□□□□□ -1.39
VARS-222ENST00000470953 PRF1P14222 555 aa6.39□□□□□ -1.39
VARS-222ENST00000470953 AXLP30530 894 aa6.39□□□□□ -1.39
VARS-222ENST00000470953 GJA4P35212 333 aa6.39□□□□□ -1.39
VARS-222ENST00000470953 ADRA1BP35368 520 aa6.39□□□□□ -1.39
VARS-222ENST00000470953 MCM2P49736 904 aa6.39□□□□□ -1.39
VARS-222ENST00000470953 OXCT1P55809 520 aa6.39□□□□□ -1.39
VARS-222ENST00000470953 PTENP60484 403 aa6.39□□□□□ -1.39
VARS-222ENST00000470953 PSMC5P62195 406 aa6.39□□□□□ -1.39
VARS-222ENST00000470953 MBTD1Q05BQ5 628 aa6.39□□□□□ -1.39
VARS-222ENST00000470953 ZNF33AQ06730 810 aa6.39□□□□□ -1.39
VARS-222ENST00000470953 MRPL58Q14197 206 aaKnown RBP6.39□□□□□ -1.39
VARS-222ENST00000470953 FBXO43Q4G163 708 aa6.39□□□□□ -1.39
VARS-222ENST00000470953 GLRA4Q5JXX5 417 aa6.39□□□□□ -1.39
VARS-222ENST00000470953 SPDYCQ5MJ68 293 aa6.39□□□□□ -1.39
VARS-222ENST00000470953 GPR158Q5T848 1215 aa6.39□□□□□ -1.39
VARS-222ENST00000470953 MCTP1Q6DN14 999 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms