RNA–Protein interactions for RNA: ENST00000470363.5

HLA-C-206, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,279 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-206ENST00000470363 ODC1P11926 461 aa12.4□□□□□ -0.42
HLA-C-206ENST00000470363 ATF6P18850 670 aa12.4□□□□□ -0.42
HLA-C-206ENST00000470363 ALDH1A3P47895 512 aa12.4□□□□□ -0.42
HLA-C-206ENST00000470363 EPHB3P54753 998 aa12.4□□□□□ -0.42
HLA-C-206ENST00000470363 CSTF1Q05048 431 aaKnown RBP12.4□□□□□ -0.42
HLA-C-206ENST00000470363 LRRC63Q05C16 580 aa12.4□□□□□ -0.42
HLA-C-206ENST00000470363 GAS6Q14393 721 aa12.4□□□□□ -0.42
HLA-C-206ENST00000470363 IRF2BP1Q8IU81 584 aa12.4□□□□□ -0.42
HLA-C-206ENST00000470363 ARID3BQ8IVW6 561 aaPredicted RBP12.4□□□□□ -0.42
HLA-C-206ENST00000470363 DCLK2Q8N568 766 aa12.4□□□□□ -0.42
HLA-C-206ENST00000470363 FAM3CQ92520 227 aa12.4□□□□□ -0.42
HLA-C-206ENST00000470363 RUBCNQ92622 972 aa12.4□□□□□ -0.42
HLA-C-206ENST00000470363 E2F7Q96AV8 911 aa12.4□□□□□ -0.42
HLA-C-206ENST00000470363 FAM212AQ96EL1 285 aa12.4□□□□□ -0.42
HLA-C-206ENST00000470363 CHRDQ9H2X0 955 aa12.4□□□□□ -0.42
HLA-C-206ENST00000470363 PCIF1Q9H4Z3 704 aa12.4□□□□□ -0.42
HLA-C-206ENST00000470363 TMEM206Q9H813 350 aa12.4□□□□□ -0.42
HLA-C-206ENST00000470363 ZSCAN32Q9NX65 697 aa12.4□□□□□ -0.42
HLA-C-206ENST00000470363 DPP3Q9NY33 737 aa12.4□□□□□ -0.42
HLA-C-206ENST00000470363 TRAF3IP3Q9Y228 551 aa12.4□□□□□ -0.42
HLA-C-206ENST00000470363 MRPS17Q9Y2R5 130 aaKnown RBP12.4□□□□□ -0.42
HLA-C-206ENST00000470363 PCDHGA2Q9Y5H1 932 aa12.4□□□□□ -0.42
HLA-C-206ENST00000470363 CYB561D2O14569 222 aa12.39□□□□□ -0.43
HLA-C-206ENST00000470363 CHADO15335 359 aa12.39□□□□□ -0.43
HLA-C-206ENST00000470363 NR3C1P04150 777 aa12.39□□□□□ -0.43
HLA-C-206ENST00000470363 ZNF18P17022 549 aa12.39□□□□□ -0.43
HLA-C-206ENST00000470363 CDK11BP21127 795 aaKnown RBP12.39□□□□□ -0.43
HLA-C-206ENST00000470363 TGM1P22735 817 aa12.39□□□□□ -0.43
HLA-C-206ENST00000470363 ID4P47928 161 aa12.39□□□□□ -0.43
HLA-C-206ENST00000470363 CASP4P49662 377 aa12.39□□□□□ -0.43
HLA-C-206ENST00000470363 CYP2J2P51589 502 aa12.39□□□□□ -0.43
HLA-C-206ENST00000470363 TPM4P67936 248 aa12.39□□□□□ -0.43
HLA-C-206ENST00000470363 ADAM9Q13443 819 aa12.39□□□□□ -0.43
HLA-C-206ENST00000470363 CDKAL1Q5VV42 579 aa12.39□□□□□ -0.43
HLA-C-206ENST00000470363 WSCD1Q658N2 575 aa12.39□□□□□ -0.43
HLA-C-206ENST00000470363 ARMCX5Q6P1M9 558 aa12.39□□□□□ -0.43
HLA-C-206ENST00000470363 TSSK4Q6SA08 328 aa12.39□□□□□ -0.43
HLA-C-206ENST00000470363 HS2ST1Q7LGA3 356 aa12.39□□□□□ -0.43
HLA-C-206ENST00000470363 ERMP1Q7Z2K6 904 aa12.39□□□□□ -0.43
HLA-C-206ENST00000470363 TMEM150AQ86TG1 271 aa12.39□□□□□ -0.43
HLA-C-206ENST00000470363 NT5DC4Q86YG4 428 aa12.39□□□□□ -0.43
HLA-C-206ENST00000470363 NOC3LQ8WTT2 800 aaKnown RBP12.39□□□□□ -0.43
HLA-C-206ENST00000470363 RMDN1Q96DB5 314 aa12.39□□□□□ -0.43
HLA-C-206ENST00000470363 CBWD1Q9BRT8 395 aa12.39□□□□□ -0.43
HLA-C-206ENST00000470363 EPC1Q9H2F5 836 aa12.39□□□□□ -0.43
HLA-C-206ENST00000470363 AGPAT3Q9NRZ7 376 aa12.39□□□□□ -0.43
HLA-C-206ENST00000470363 OBP2AQ9NY56 170 aa12.39□□□□□ -0.43
HLA-C-206ENST00000470363 DSEQ9UL01 958 aa12.39□□□□□ -0.43
HLA-C-206ENST00000470363 EXOC7Q9UPT5 735 aa12.39□□□□□ -0.43
HLA-C-206ENST00000470363 PIAS3Q9Y6X2 628 aa12.39□□□□□ -0.43
HLA-C-206ENST00000470363 PATJQ8NI35 1801 aa12.39□□□□□ -0.43
HLA-C-206ENST00000470363 SCN1AP35498 2009 aa12.38□□□□□ -0.43
HLA-C-206ENST00000470363 ANK1P16157 1881 aa12.38□□□□□ -0.43
HLA-C-206ENST00000470363 MYBPHLA2RUH7 354 aa12.38□□□□□ -0.43
HLA-C-206ENST00000470363 GOLGA8IPA6NC78 632 aa12.38□□□□□ -0.43
HLA-C-206ENST00000470363 GOLGA8JA6NMD2 632 aa12.38□□□□□ -0.43
HLA-C-206ENST00000470363 KPNA7A9QM74 516 aa12.38□□□□□ -0.43
HLA-C-206ENST00000470363 KCNJ18B7U540 433 aa12.38□□□□□ -0.43
HLA-C-206ENST00000470363 ZNF263O14978 683 aa12.38□□□□□ -0.43
HLA-C-206ENST00000470363 HAPLN1P10915 354 aaPredicted RBP12.38□□□□□ -0.43
HLA-C-206ENST00000470363 HMGA1P17096 107 aaKnown RBP12.38□□□□□ -0.43
HLA-C-206ENST00000470363 NR2F2P24468 414 aa12.38□□□□□ -0.43
HLA-C-206ENST00000470363 TUFMP49411 452 aaKnown RBP12.38□□□□□ -0.43
HLA-C-206ENST00000470363 TAF6P49848 677 aa12.38□□□□□ -0.43
HLA-C-206ENST00000470363 FKBP3Q00688 224 aaKnown RBP12.38□□□□□ -0.43
HLA-C-206ENST00000470363 KCNJ12Q14500 433 aa12.38□□□□□ -0.43
HLA-C-206ENST00000470363 EDRF1Q3B7T1 1238 aa12.38□□□□□ -0.43
HLA-C-206ENST00000470363 SLC39A12Q504Y0 691 aa12.38□□□□□ -0.43
HLA-C-206ENST00000470363 CEP135Q66GS9 1140 aa12.38□□□□□ -0.43
HLA-C-206ENST00000470363 GPIHBP1Q8IV16 184 aa12.38□□□□□ -0.43
HLA-C-206ENST00000470363 PKMYT1Q99640 499 aa12.38□□□□□ -0.43
HLA-C-206ENST00000470363 LPIN3Q9BQK8 851 aa12.38□□□□□ -0.43
HLA-C-206ENST00000470363 IER2Q9BTL4 223 aa12.38□□□□□ -0.43
HLA-C-206ENST00000470363 SLC46A2Q9BY10 475 aa12.38□□□□□ -0.43
HLA-C-206ENST00000470363 THAP9Q9H5L6 903 aa12.38□□□□□ -0.43
HLA-C-206ENST00000470363 LMAN1LQ9HAT1 526 aa12.38□□□□□ -0.43
HLA-C-206ENST00000470363 TMLHEQ9NVH6 421 aa12.38□□□□□ -0.43
HLA-C-206ENST00000470363 MIA3Q5JRA6 1907 aa12.38□□□□□ -0.43
HLA-C-206ENST00000470363 CEP250Q9BV73 2442 aa12.37□□□□□ -0.43
HLA-C-206ENST00000470363 CETN3O15182 167 aa12.37□□□□□ -0.43
HLA-C-206ENST00000470363 IL18RAPO95256 599 aa12.37□□□□□ -0.43
HLA-C-206ENST00000470363 PRAMEF12O95522 483 aa12.37□□□□□ -0.43
HLA-C-206ENST00000470363 FGF19O95750 216 aa12.37□□□□□ -0.43
HLA-C-206ENST00000470363 GARTP22102 1010 aa12.37□□□□□ -0.43
HLA-C-206ENST00000470363 GABRR2P28476 465 aa12.37□□□□□ -0.43
HLA-C-206ENST00000470363 CDR1P51861 262 aa12.37□□□□□ -0.43
HLA-C-206ENST00000470363 FANCCQ00597 558 aa12.37□□□□□ -0.43
HLA-C-206ENST00000470363 SMARCB1Q12824 385 aa12.37□□□□□ -0.43
HLA-C-206ENST00000470363 KRT31Q15323 416 aa12.37□□□□□ -0.43
HLA-C-206ENST00000470363 FOXR2Q6PJQ5 311 aa12.37□□□□□ -0.43
HLA-C-206ENST00000470363 TXNDC11Q6PKC3 985 aa12.37□□□□□ -0.43
HLA-C-206ENST00000470363 LIMS2Q7Z4I7 341 aa12.37□□□□□ -0.43
HLA-C-206ENST00000470363 ITIH5Q86UX2 942 aa12.37□□□□□ -0.43
HLA-C-206ENST00000470363 BRSK2Q8IWQ3 736 aa12.37□□□□□ -0.43
HLA-C-206ENST00000470363 ZC3H3Q8IXZ2 948 aaKnown RBP12.37□□□□□ -0.43
HLA-C-206ENST00000470363 KIAA2013Q8IYS2 634 aa12.37□□□□□ -0.43
HLA-C-206ENST00000470363 C1orf127Q8N9H9 656 aa12.37□□□□□ -0.43
HLA-C-206ENST00000470363 RDH13Q8NBN7 331 aa12.37□□□□□ -0.43
HLA-C-206ENST00000470363 C2orf15Q8WU43 125 aaKnown RBP12.37□□□□□ -0.43
HLA-C-206ENST00000470363 POMGNT1Q8WZA1 660 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms