RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 LHX5Q9H2C1 402 aa15.45■□□□□ 0.06
CBWD3-205ENST00000469687 DDX56Q9NY93 547 aaKnown RBP15.45■□□□□ 0.06
CBWD3-205ENST00000469687 SAMD15Q9P1V8 674 aa15.45■□□□□ 0.06
CBWD3-205ENST00000469687 GGT7Q9UJ14 662 aa15.45■□□□□ 0.06
CBWD3-205ENST00000469687 PLXNA1Q9UIW2 1896 aa15.45■□□□□ 0.06
CBWD3-205ENST00000469687 CCT8L1PA6NM43 557 aa15.45■□□□□ 0.06
CBWD3-205ENST00000469687 CYP2C8P10632 490 aa15.45■□□□□ 0.06
CBWD3-205ENST00000469687 ARHGAP1Q07960 439 aa15.45■□□□□ 0.06
CBWD3-205ENST00000469687 MTM1Q13496 603 aa15.45■□□□□ 0.06
CBWD3-205ENST00000469687 RAB6CQ53S08 254 aa15.45■□□□□ 0.06
CBWD3-205ENST00000469687 EXOC8Q8IYI6 725 aa15.45■□□□□ 0.06
CBWD3-205ENST00000469687 NKD2Q969F2 451 aaPredicted RBP15.45■□□□□ 0.06
CBWD3-205ENST00000469687 CDCA5Q96FF9 252 aa15.45■□□□□ 0.06
CBWD3-205ENST00000469687 RAB6CQ9H0N0 254 aa15.45■□□□□ 0.06
CBWD3-205ENST00000469687 PDZD7Q9H5P4 517 aa15.45■□□□□ 0.06
CBWD3-205ENST00000469687 STRIP2Q9ULQ0 834 aa15.45■□□□□ 0.06
CBWD3-205ENST00000469687 DRG1Q9Y295 367 aaKnown RBP15.45■□□□□ 0.06
CBWD3-205ENST00000469687 EXOC1LA0A1B0GW35 172 aa15.44■□□□□ 0.06
CBWD3-205ENST00000469687 VGLL3A8MV65 326 aa15.44■□□□□ 0.06
CBWD3-205ENST00000469687 CST8O60676 142 aa15.44■□□□□ 0.06
CBWD3-205ENST00000469687 MICAL2O94851 1124 aa15.44■□□□□ 0.06
CBWD3-205ENST00000469687 ITGAVP06756 1048 aa15.44■□□□□ 0.06
CBWD3-205ENST00000469687 ZNF286BP0CG31 522 aa15.44■□□□□ 0.06
CBWD3-205ENST00000469687 SLC26A2P50443 739 aa15.44■□□□□ 0.06
CBWD3-205ENST00000469687 NRLP54845 237 aa15.44■□□□□ 0.06
CBWD3-205ENST00000469687 PTPN11Q06124 597 aaPredicted RBP15.44■□□□□ 0.06
CBWD3-205ENST00000469687 TTLL4Q14679 1199 aa15.44■□□□□ 0.06
CBWD3-205ENST00000469687 STAT4Q14765 748 aa15.44■□□□□ 0.06
CBWD3-205ENST00000469687 ZKSCAN8Q15776 578 aaPredicted RBP15.44■□□□□ 0.06
CBWD3-205ENST00000469687 SLC10A6Q3KNW5 377 aa15.44■□□□□ 0.06
CBWD3-205ENST00000469687 LACTB2Q53H82 288 aaPredicted RBP15.44■□□□□ 0.06
CBWD3-205ENST00000469687 ARMCX2Q7L311 632 aa15.44■□□□□ 0.06
CBWD3-205ENST00000469687 POLNQ7Z5Q5 900 aa15.44■□□□□ 0.06
CBWD3-205ENST00000469687 ZBED8Q8IZ13 594 aa15.44■□□□□ 0.06
CBWD3-205ENST00000469687 ANKS4BQ8N8V4 417 aa15.44■□□□□ 0.06
CBWD3-205ENST00000469687 MAML1Q92585 1016 aa15.44■□□□□ 0.06
CBWD3-205ENST00000469687 SYNCQ9H7C4 482 aa15.44■□□□□ 0.06
CBWD3-205ENST00000469687 ACTR5Q9H9F9 607 aaPredicted RBP15.44■□□□□ 0.06
CBWD3-205ENST00000469687 KIF9Q9HAQ2 790 aa15.44■□□□□ 0.06
CBWD3-205ENST00000469687 ABCF3Q9NUQ8 709 aa15.44■□□□□ 0.06
CBWD3-205ENST00000469687 HAUS2Q9NVX0 235 aa15.44■□□□□ 0.06
CBWD3-205ENST00000469687 ERAP1Q9NZ08 941 aa15.44■□□□□ 0.06
CBWD3-205ENST00000469687 SCN1AP35498 2009 aa15.44■□□□□ 0.06
CBWD3-205ENST00000469687 RASA4BC9J798 803 aa15.43■□□□□ 0.06
CBWD3-205ENST00000469687 POC1B-GALNT4F8VUJ3 575 aa15.43■□□□□ 0.06
CBWD3-205ENST00000469687 RASA4O43374 803 aa15.43■□□□□ 0.06
CBWD3-205ENST00000469687 SNX3O60493 162 aa15.43■□□□□ 0.06
CBWD3-205ENST00000469687 CILPO75339 1184 aa15.43■□□□□ 0.06
CBWD3-205ENST00000469687 IL18RAPO95256 599 aa15.43■□□□□ 0.06
CBWD3-205ENST00000469687 LGALS2P05162 132 aa15.43■□□□□ 0.06
CBWD3-205ENST00000469687 KDELR1P24390 212 aa15.43■□□□□ 0.06
CBWD3-205ENST00000469687 POLR2BP30876 1174 aaKnown RBP15.43■□□□□ 0.06
CBWD3-205ENST00000469687 GJA5P36382 358 aa15.43■□□□□ 0.06
CBWD3-205ENST00000469687 SH3PXD2AQ5TCZ1 1133 aa15.43■□□□□ 0.06
CBWD3-205ENST00000469687 ANKRD22Q5VYY1 191 aa15.43■□□□□ 0.06
CBWD3-205ENST00000469687 MAP1SQ66K74 1059 aaPredicted RBP15.43■□□□□ 0.06
CBWD3-205ENST00000469687 NUGGCQ68CJ6 796 aa15.43■□□□□ 0.06
CBWD3-205ENST00000469687 ANKMY2Q8IV38 441 aa15.43■□□□□ 0.06
CBWD3-205ENST00000469687 UBA3Q8TBC4 463 aa15.43■□□□□ 0.06
CBWD3-205ENST00000469687 CCHCR1Q8TD31 782 aa15.43■□□□□ 0.06
CBWD3-205ENST00000469687 CKAP2Q8WWK9 683 aa15.43■□□□□ 0.06
CBWD3-205ENST00000469687 PRCCQ92733 491 aaPredicted RBP15.43■□□□□ 0.06
CBWD3-205ENST00000469687 MRRFQ96E11 262 aaKnown RBP15.43■□□□□ 0.06
CBWD3-205ENST00000469687 PIWIL1Q96J94 861 aaKnown RBP15.43■□□□□ 0.06
CBWD3-205ENST00000469687 KDM4CQ9H3R0 1056 aa15.43■□□□□ 0.06
CBWD3-205ENST00000469687 SLC40A1Q9NP59 571 aa15.43■□□□□ 0.06
CBWD3-205ENST00000469687 AKT3Q9Y243 479 aa15.43■□□□□ 0.06
CBWD3-205ENST00000469687 M0QYV0 167 aa15.43■□□□□ 0.06
CBWD3-205ENST00000469687 MED7O43513 233 aa15.43■□□□□ 0.06
CBWD3-205ENST00000469687 RASSF9O75901 435 aa15.43■□□□□ 0.06
CBWD3-205ENST00000469687 PIAS1O75925 651 aa15.43■□□□□ 0.06
CBWD3-205ENST00000469687 OAS1P00973 400 aaKnown RBP15.43■□□□□ 0.06
CBWD3-205ENST00000469687 ABHD2P08910 425 aa15.43■□□□□ 0.06
CBWD3-205ENST00000469687 ARF4P18085 180 aaPredicted RBP15.43■□□□□ 0.06
CBWD3-205ENST00000469687 PPIL2Q13356 520 aa15.43■□□□□ 0.06
CBWD3-205ENST00000469687 ITIH4Q14624 930 aa15.43■□□□□ 0.06
CBWD3-205ENST00000469687 MORF4L2Q15014 288 aa15.43■□□□□ 0.06
CBWD3-205ENST00000469687 CCDC142Q17RM4 750 aa15.43■□□□□ 0.06
CBWD3-205ENST00000469687 HSPH1Q92598 858 aa15.43■□□□□ 0.06
CBWD3-205ENST00000469687 CXCL16Q9H2A7 254 aa15.43■□□□□ 0.06
CBWD3-205ENST00000469687 PCDH9Q9HC56 1237 aa15.43■□□□□ 0.06
CBWD3-205ENST00000469687 PRMT7Q9NVM4 692 aaPredicted RBP15.43■□□□□ 0.06
CBWD3-205ENST00000469687 RNF181Q9P0P0 153 aa15.43■□□□□ 0.06
CBWD3-205ENST00000469687 KAT6AQ92794 2004 aa15.42■□□□□ 0.06
CBWD3-205ENST00000469687 SPAG7O75391 227 aa15.42■□□□□ 0.06
CBWD3-205ENST00000469687 CYP3A5P20815 502 aa15.42■□□□□ 0.06
CBWD3-205ENST00000469687 MIPP30301 263 aa15.42■□□□□ 0.06
CBWD3-205ENST00000469687 PHKA2P46019 1235 aa15.42■□□□□ 0.06
CBWD3-205ENST00000469687 PDIA2Q13087 525 aaKnown RBP15.42■□□□□ 0.06
CBWD3-205ENST00000469687 TMEM176AQ96HP8 235 aa15.42■□□□□ 0.06
CBWD3-205ENST00000469687 CFAP57Q96MR6 1250 aa15.42■□□□□ 0.06
CBWD3-205ENST00000469687 PEBP4Q96S96 227 aa15.42■□□□□ 0.06
CBWD3-205ENST00000469687 CCDC77Q9BR77 488 aa15.42■□□□□ 0.06
CBWD3-205ENST00000469687 VPS37BQ9H9H4 285 aa15.42■□□□□ 0.06
CBWD3-205ENST00000469687 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.42■□□□□ 0.06
CBWD3-205ENST00000469687 TCRBV7S3A2A0A539 114 aa15.42■□□□□ 0.06
CBWD3-205ENST00000469687 GPD2P43304 727 aa15.42■□□□□ 0.06
CBWD3-205ENST00000469687 CTCFP49711 727 aaPredicted RBP15.42■□□□□ 0.06
CBWD3-205ENST00000469687 MSS51Q4VC12 460 aa15.42■□□□□ 0.06
CBWD3-205ENST00000469687 FAM133BQ5BKY9 247 aaKnown RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms