RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 MSS51Q4VC12 460 aa18.76■□□□□ 0.59
MCF2L-221ENST00000469415 OPTNQ96CV9 577 aa18.76■□□□□ 0.59
MCF2L-221ENST00000469415 VCPIP1Q96JH7 1222 aa18.76■□□□□ 0.59
MCF2L-221ENST00000469415 ROPN1BQ9BZX4 212 aaPredicted RBP18.76■□□□□ 0.59
MCF2L-221ENST00000469415 MIS12Q9H081 205 aa18.76■□□□□ 0.59
MCF2L-221ENST00000469415 ROPN1Q9HAT0 212 aaPredicted RBP18.76■□□□□ 0.59
MCF2L-221ENST00000469415 NGRNQ9NPE2 291 aaKnown RBP18.76■□□□□ 0.59
MCF2L-221ENST00000469415 MCM3APO60318 1980 aa18.75■□□□□ 0.59
MCF2L-221ENST00000469415 ABLIM1O14639 778 aa18.75■□□□□ 0.59
MCF2L-221ENST00000469415 DNALI1O14645 258 aaPredicted RBP18.75■□□□□ 0.59
MCF2L-221ENST00000469415 CDH16O75309 829 aa18.75■□□□□ 0.59
MCF2L-221ENST00000469415 RAD23BP54727 409 aa18.75■□□□□ 0.59
MCF2L-221ENST00000469415 MCL1Q07820 350 aa18.75■□□□□ 0.59
MCF2L-221ENST00000469415 TFDP1Q14186 410 aa18.75■□□□□ 0.59
MCF2L-221ENST00000469415 ICE2Q659A1 982 aa18.75■□□□□ 0.59
MCF2L-221ENST00000469415 TRPM8Q7Z2W7 1104 aa18.75■□□□□ 0.59
MCF2L-221ENST00000469415 SLCO2A1Q92959 643 aa18.75■□□□□ 0.59
MCF2L-221ENST00000469415 MAGEB5Q9BZ81 275 aa18.75■□□□□ 0.59
MCF2L-221ENST00000469415 AVILO75366 819 aa18.75■□□□□ 0.59
MCF2L-221ENST00000469415 CPP00450 1065 aa18.75■□□□□ 0.59
MCF2L-221ENST00000469415 CA4P22748 312 aa18.75■□□□□ 0.59
MCF2L-221ENST00000469415 IREB2P48200 963 aaKnown RBP18.75■□□□□ 0.59
MCF2L-221ENST00000469415 SH3D19Q5HYK7 790 aa18.75■□□□□ 0.59
MCF2L-221ENST00000469415 SESTD1Q86VW0 696 aa18.75■□□□□ 0.59
MCF2L-221ENST00000469415 NR2E3Q9Y5X4 410 aa18.75■□□□□ 0.59
MCF2L-221ENST00000469415 WDR81Q562E7 1941 aa18.75■□□□□ 0.59
MCF2L-221ENST00000469415 EDNRBP24530 442 aa18.74■□□□□ 0.59
MCF2L-221ENST00000469415 MIPP30301 263 aa18.74■□□□□ 0.59
MCF2L-221ENST00000469415 FOXN2P32314 431 aa18.74■□□□□ 0.59
MCF2L-221ENST00000469415 ADCYAP1R1P41586 468 aa18.74■□□□□ 0.59
MCF2L-221ENST00000469415 VCPP55072 806 aaKnown RBP18.74■□□□□ 0.59
MCF2L-221ENST00000469415 KIZQ2M2Z5 673 aa18.74■□□□□ 0.59
MCF2L-221ENST00000469415 MAP1SQ66K74 1059 aaPredicted RBP18.74■□□□□ 0.59
MCF2L-221ENST00000469415 CNPY4Q8N129 248 aa18.74■□□□□ 0.59
MCF2L-221ENST00000469415 ALLCQ8N6M5 410 aa18.74■□□□□ 0.59
MCF2L-221ENST00000469415 ADPGKQ9BRR6 497 aa18.74■□□□□ 0.59
MCF2L-221ENST00000469415 RLFQ13129 1914 aa18.74■□□□□ 0.59
MCF2L-221ENST00000469415 ASAP2O43150 1006 aa18.74■□□□□ 0.59
MCF2L-221ENST00000469415 SNX3O60493 162 aa18.74■□□□□ 0.59
MCF2L-221ENST00000469415 MICAL2O94851 1124 aa18.74■□□□□ 0.59
MCF2L-221ENST00000469415 FNBP1LQ5T0N5 605 aa18.74■□□□□ 0.59
MCF2L-221ENST00000469415 C3orf20Q8ND61 904 aa18.74■□□□□ 0.59
MCF2L-221ENST00000469415 FAM167AQ96KS9 214 aa18.74■□□□□ 0.59
MCF2L-221ENST00000469415 NSRP1Q9H0G5 558 aaKnown RBP18.74■□□□□ 0.59
MCF2L-221ENST00000469415 CHMP2BQ9UQN3 213 aa18.74■□□□□ 0.59
MCF2L-221ENST00000469415 TGFB3P10600 412 aa18.74■□□□□ 0.59
MCF2L-221ENST00000469415 CDH6P55285 790 aa18.74■□□□□ 0.59
MCF2L-221ENST00000469415 MBTD1Q05BQ5 628 aa18.74■□□□□ 0.59
MCF2L-221ENST00000469415 PTPN11Q06124 597 aaPredicted RBP18.74■□□□□ 0.59
MCF2L-221ENST00000469415 PIGHQ14442 188 aaPredicted RBP18.74■□□□□ 0.59
MCF2L-221ENST00000469415 PPP6R3Q5H9R7 873 aaPredicted RBP18.74■□□□□ 0.59
MCF2L-221ENST00000469415 MFSD5Q6N075 450 aa18.74■□□□□ 0.59
MCF2L-221ENST00000469415 CYB5D1Q6P9G0 228 aa18.74■□□□□ 0.59
MCF2L-221ENST00000469415 RMDN2Q96LZ7 410 aa18.74■□□□□ 0.59
MCF2L-221ENST00000469415 TRABDQ9H4I3 376 aa18.74■□□□□ 0.59
MCF2L-221ENST00000469415 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.74■□□□□ 0.59
MCF2L-221ENST00000469415 PPEF2O14830 753 aa18.73■□□□□ 0.59
MCF2L-221ENST00000469415 YTHDF3Q7Z739 585 aaKnown RBP18.73■□□□□ 0.59
MCF2L-221ENST00000469415 FUKQ8N0W3 1084 aa18.73■□□□□ 0.59
MCF2L-221ENST00000469415 ZCCHC9Q8N567 271 aaKnown RBP18.73■□□□□ 0.59
MCF2L-221ENST00000469415 SLC4A11Q8NBS3 891 aa18.73■□□□□ 0.59
MCF2L-221ENST00000469415 PYROXD1Q8WU10 500 aa18.73■□□□□ 0.59
MCF2L-221ENST00000469415 CENPTQ96BT3 561 aa18.73■□□□□ 0.59
MCF2L-221ENST00000469415 HPDLQ96IR7 371 aa18.73■□□□□ 0.59
MCF2L-221ENST00000469415 CNTN6Q9UQ52 1028 aa18.73■□□□□ 0.59
MCF2L-221ENST00000469415 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.73■□□□□ 0.59
MCF2L-221ENST00000469415 RBP3P10745 1247 aa18.73■□□□□ 0.59
MCF2L-221ENST00000469415 ARF4P18085 180 aaPredicted RBP18.73■□□□□ 0.59
MCF2L-221ENST00000469415 RPA3P35244 121 aaPredicted RBP18.73■□□□□ 0.59
MCF2L-221ENST00000469415 NDST1P52848 882 aa18.73■□□□□ 0.59
MCF2L-221ENST00000469415 WDR4P57081 412 aaKnown RBP18.73■□□□□ 0.59
MCF2L-221ENST00000469415 KCNJ2P63252 427 aa18.73■□□□□ 0.59
MCF2L-221ENST00000469415 SYDE1Q6ZW31 735 aaPredicted RBP18.73■□□□□ 0.59
MCF2L-221ENST00000469415 PIGWQ7Z7B1 504 aa18.73■□□□□ 0.59
MCF2L-221ENST00000469415 CFAP57Q96MR6 1250 aa18.73■□□□□ 0.59
MCF2L-221ENST00000469415 B3GNT5Q9BYG0 378 aa18.73■□□□□ 0.59
MCF2L-221ENST00000469415 SMARCAD1Q9H4L7 1026 aa18.73■□□□□ 0.59
MCF2L-221ENST00000469415 IFT122Q9HBG6 1241 aa18.73■□□□□ 0.59
MCF2L-221ENST00000469415 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.72■□□□□ 0.59
MCF2L-221ENST00000469415 E5RJQ4 531 aa18.72■□□□□ 0.59
MCF2L-221ENST00000469415 RNF8O76064 485 aa18.72■□□□□ 0.59
MCF2L-221ENST00000469415 EIF3EP60228 445 aaKnown RBP18.72■□□□□ 0.59
MCF2L-221ENST00000469415 YWHAEP62258 255 aaKnown RBP18.72■□□□□ 0.59
MCF2L-221ENST00000469415 SLC20A2Q08357 652 aa18.72■□□□□ 0.59
MCF2L-221ENST00000469415 MYO1EQ12965 1108 aa18.72■□□□□ 0.59
MCF2L-221ENST00000469415 HIF1AQ16665 826 aa18.72■□□□□ 0.59
MCF2L-221ENST00000469415 NOL9Q5SY16 702 aaKnown RBP18.72■□□□□ 0.59
MCF2L-221ENST00000469415 C3orf62Q6ZUJ4 267 aa18.72■□□□□ 0.59
MCF2L-221ENST00000469415 SCUBE3Q8IX30 993 aa18.72■□□□□ 0.59
MCF2L-221ENST00000469415 UBR7Q8N806 425 aa18.72■□□□□ 0.59
MCF2L-221ENST00000469415 CCDC63Q8NA47 563 aa18.72■□□□□ 0.59
MCF2L-221ENST00000469415 SPATA18Q8TC71 538 aa18.72■□□□□ 0.59
MCF2L-221ENST00000469415 TMEM109Q9BVC6 243 aa18.72■□□□□ 0.59
MCF2L-221ENST00000469415 PITPNM3Q9BZ71 974 aa18.72■□□□□ 0.59
MCF2L-221ENST00000469415 SYNJ2BP-COX16A0A087WUM0 186 aa18.72■□□□□ 0.59
MCF2L-221ENST00000469415 H7C0C1 242 aa18.72■□□□□ 0.59
MCF2L-221ENST00000469415 ABCD1P33897 745 aa18.72■□□□□ 0.59
MCF2L-221ENST00000469415 RPL22P35268 128 aaKnown RBP18.72■□□□□ 0.59
MCF2L-221ENST00000469415 ATP5OP48047 213 aa18.72■□□□□ 0.59
MCF2L-221ENST00000469415 HADHQ16836 314 aaKnown RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms