RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 KANSL3Q9P2N6 904 aa10.75□□□□□ -0.69
MSH5-213ENST00000468136 DMGDHQ9UI17 866 aaKnown RBP10.75□□□□□ -0.69
MSH5-213ENST00000468136 TSPAN16Q9UKR8 245 aa10.75□□□□□ -0.69
MSH5-213ENST00000468136 PADI3Q9ULW8 664 aa10.75□□□□□ -0.69
MSH5-213ENST00000468136 PHF24Q9UPV7 400 aa10.75□□□□□ -0.69
MSH5-213ENST00000468136 HES2Q9Y543 173 aa10.75□□□□□ -0.69
MSH5-213ENST00000468136 TRIP12Q14669 1992 aaPredicted RBP10.74□□□□□ -0.69
MSH5-213ENST00000468136 ARVCFO00192 962 aa10.74□□□□□ -0.69
MSH5-213ENST00000468136 DPYSL4O14531 572 aa10.74□□□□□ -0.69
MSH5-213ENST00000468136 PTGESO14684 152 aa10.74□□□□□ -0.69
MSH5-213ENST00000468136 GABRDO14764 452 aa10.74□□□□□ -0.69
MSH5-213ENST00000468136 ZNF189O75820 626 aaPredicted RBP10.74□□□□□ -0.69
MSH5-213ENST00000468136 GAS8O95995 478 aa10.74□□□□□ -0.69
MSH5-213ENST00000468136 CFHP08603 1231 aa10.74□□□□□ -0.69
MSH5-213ENST00000468136 PSMA2P25787 234 aa10.74□□□□□ -0.69
MSH5-213ENST00000468136 PCSK1P29120 753 aa10.74□□□□□ -0.69
MSH5-213ENST00000468136 AARSP49588 968 aaKnown RBP eCLIP10.74□□□□□ -0.693e-6■■■■■ 61.8
MSH5-213ENST00000468136 GUCY2FP51841 1108 aa10.74□□□□□ -0.69
MSH5-213ENST00000468136 ZNF143P52747 638 aaPredicted RBP10.74□□□□□ -0.69
MSH5-213ENST00000468136 DR1Q01658 176 aa10.74□□□□□ -0.69
MSH5-213ENST00000468136 CAV1Q03135 178 aa10.74□□□□□ -0.69
MSH5-213ENST00000468136 BFSP2Q13515 415 aa10.74□□□□□ -0.69
MSH5-213ENST00000468136 CCNG2Q16589 344 aa10.74□□□□□ -0.69
MSH5-213ENST00000468136 ADGRF2Q8IZF7 708 aa10.74□□□□□ -0.69
MSH5-213ENST00000468136 BBOF1Q8ND07 529 aa10.74□□□□□ -0.69
MSH5-213ENST00000468136 SLC35F5Q8WV83 523 aa10.74□□□□□ -0.69
MSH5-213ENST00000468136 C18orf25Q96B23 403 aaPredicted RBP10.74□□□□□ -0.69
MSH5-213ENST00000468136 BTBD6Q96KE9 485 aa10.74□□□□□ -0.69
MSH5-213ENST00000468136 MCEEQ96PE7 176 aa10.74□□□□□ -0.69
MSH5-213ENST00000468136 TWNKQ96RR1 684 aa10.74□□□□□ -0.69
MSH5-213ENST00000468136 TBCBQ99426 244 aa10.74□□□□□ -0.69
MSH5-213ENST00000468136 HNRNPABQ99729 332 aaKnown RBP10.74□□□□□ -0.69
MSH5-213ENST00000468136 ERP44Q9BS26 406 aa10.74□□□□□ -0.69
MSH5-213ENST00000468136 AP1M1Q9BXS5 423 aa10.74□□□□□ -0.69
MSH5-213ENST00000468136 UBXN6Q9BZV1 441 aa10.74□□□□□ -0.69
MSH5-213ENST00000468136 DDX47Q9H0S4 455 aaKnown RBP10.74□□□□□ -0.69
MSH5-213ENST00000468136 RSAD1Q9HA92 442 aa10.74□□□□□ -0.69
MSH5-213ENST00000468136 STARD7Q9NQZ5 370 aa10.74□□□□□ -0.69
MSH5-213ENST00000468136 SMARCAL1Q9NZC9 954 aa10.74□□□□□ -0.69
MSH5-213ENST00000468136 EHD2Q9NZN4 543 aa10.74□□□□□ -0.69
MSH5-213ENST00000468136 GRIN2DO15399 1336 aa10.74□□□□□ -0.69
MSH5-213ENST00000468136 PDCD11Q14690 1871 aaKnown RBP10.74□□□□□ -0.69
MSH5-213ENST00000468136 ZNF487B1APH4 448 aa10.73□□□□□ -0.69
MSH5-213ENST00000468136 DNM1LO00429 736 aa10.73□□□□□ -0.69
MSH5-213ENST00000468136 CYB561D2O14569 222 aa10.73□□□□□ -0.69
MSH5-213ENST00000468136 ECEL1O95672 775 aa10.73□□□□□ -0.69
MSH5-213ENST00000468136 GLI1P08151 1106 aa10.73□□□□□ -0.69
MSH5-213ENST00000468136 GPD1P21695 349 aa10.73□□□□□ -0.69
MSH5-213ENST00000468136 RDXP35241 583 aaKnown RBP10.73□□□□□ -0.69
MSH5-213ENST00000468136 COILP38432 576 aaPredicted RBP10.73□□□□□ -0.69
MSH5-213ENST00000468136 TNNT3P45378 269 aaPredicted RBP10.73□□□□□ -0.69
MSH5-213ENST00000468136 PLA2G4AP47712 749 aa10.73□□□□□ -0.69
MSH5-213ENST00000468136 VEGFBP49765 207 aa10.73□□□□□ -0.69
MSH5-213ENST00000468136 RNASE9P60153 205 aaKnown RBP10.73□□□□□ -0.69
MSH5-213ENST00000468136 PLCB3Q01970 1234 aa10.73□□□□□ -0.69
MSH5-213ENST00000468136 ZNF211Q13398 564 aaPredicted RBP10.73□□□□□ -0.69
MSH5-213ENST00000468136 SMC1AQ14683 1233 aaKnown RBP10.73□□□□□ -0.69
MSH5-213ENST00000468136 LPIN1Q14693 890 aa10.73□□□□□ -0.69
MSH5-213ENST00000468136 MAPRE1Q15691 268 aaKnown RBP10.73□□□□□ -0.69
MSH5-213ENST00000468136 GOLGA7BQ2TAP0 167 aa10.73□□□□□ -0.69
MSH5-213ENST00000468136 BOLA3Q53S33 107 aa10.73□□□□□ -0.69
MSH5-213ENST00000468136 GLRA4Q5JXX5 417 aa10.73□□□□□ -0.69
MSH5-213ENST00000468136 LHX8Q68G74 356 aa10.73□□□□□ -0.69
MSH5-213ENST00000468136 CROCCP2Q86T23 111 aa10.73□□□□□ -0.69
MSH5-213ENST00000468136 METTL23Q86XA0 190 aa10.73□□□□□ -0.69
MSH5-213ENST00000468136 MAP7D3Q8IWC1 876 aa10.73□□□□□ -0.69
MSH5-213ENST00000468136 PRELID2Q8N945 189 aa10.73□□□□□ -0.69
MSH5-213ENST00000468136 ATL2Q8NHH9 583 aa10.73□□□□□ -0.69
MSH5-213ENST00000468136 CPXM1Q96SM3 734 aa10.73□□□□□ -0.69
MSH5-213ENST00000468136 MRPL45Q9BRJ2 306 aaKnown RBP10.73□□□□□ -0.69
MSH5-213ENST00000468136 OSBPL8Q9BZF1 889 aa10.73□□□□□ -0.69
MSH5-213ENST00000468136 FOXP3Q9BZS1 431 aa10.73□□□□□ -0.69
MSH5-213ENST00000468136 ELAC1Q9H777 363 aaKnown RBP10.73□□□□□ -0.69
MSH5-213ENST00000468136 RGS18Q9NS28 235 aa10.73□□□□□ -0.69
MSH5-213ENST00000468136 KLK14Q9P0G3 267 aa10.73□□□□□ -0.69
MSH5-213ENST00000468136 AMACRQ9UHK6 382 aa10.73□□□□□ -0.69
MSH5-213ENST00000468136 CDH9Q9ULB4 789 aa10.73□□□□□ -0.69
MSH5-213ENST00000468136 PTCH2Q9Y6C5 1203 aa10.73□□□□□ -0.69
MSH5-213ENST00000468136 THSD7BQ9C0I4 1608 aa10.73□□□□□ -0.69
MSH5-213ENST00000468136 ARL5CA6NH57 179 aa10.72□□□□□ -0.69
MSH5-213ENST00000468136 XPO1O14980 1071 aaKnown RBP10.72□□□□□ -0.69
MSH5-213ENST00000468136 OPA1O60313 960 aa10.72□□□□□ -0.69
MSH5-213ENST00000468136 FBXO21O94952 628 aa10.72□□□□□ -0.69
MSH5-213ENST00000468136 SEC31AO94979 1220 aaKnown RBP10.72□□□□□ -0.69
MSH5-213ENST00000468136 CALCAP01258 141 aa10.72□□□□□ -0.69
MSH5-213ENST00000468136 MYCNP04198 464 aaPredicted RBP10.72□□□□□ -0.69
MSH5-213ENST00000468136 CYP11A1P05108 521 aa10.72□□□□□ -0.69
MSH5-213ENST00000468136 CTSHP09668 335 aa10.72□□□□□ -0.69
MSH5-213ENST00000468136 GHRP10912 638 aa10.72□□□□□ -0.69
MSH5-213ENST00000468136 ODC1P11926 461 aa10.72□□□□□ -0.69
MSH5-213ENST00000468136 CD52P31358 61 aa10.72□□□□□ -0.69
MSH5-213ENST00000468136 SSR1P43307 286 aaKnown RBP10.72□□□□□ -0.69
MSH5-213ENST00000468136 RPL7AP62424 266 aaKnown RBP10.72□□□□□ -0.69
MSH5-213ENST00000468136 FAM189BP81408 668 aa10.72□□□□□ -0.69
MSH5-213ENST00000468136 SLC7A5Q01650 507 aa10.72□□□□□ -0.69
MSH5-213ENST00000468136 SLC6A3Q01959 620 aa10.72□□□□□ -0.69
MSH5-213ENST00000468136 KLF1Q13351 362 aaPredicted RBP10.72□□□□□ -0.69
MSH5-213ENST00000468136 TUSC3Q13454 348 aa10.72□□□□□ -0.69
MSH5-213ENST00000468136 TFDP3Q5H9I0 405 aa10.72□□□□□ -0.69
MSH5-213ENST00000468136 EFHC1Q5JVL4 640 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms