RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 SCARA3Q6AZY7 606 aa18.54■□□□□ 0.56
TRIM56-203ENST00000467847 WDR5BQ86VZ2 330 aa18.54■□□□□ 0.56
TRIM56-203ENST00000467847 FAM160A2Q8N612 972 aaPredicted RBP18.54■□□□□ 0.56
TRIM56-203ENST00000467847 CXorf38Q8TB03 319 aa18.54■□□□□ 0.56
TRIM56-203ENST00000467847 NETO1Q8TDF5 533 aa18.54■□□□□ 0.56
TRIM56-203ENST00000467847 FGFBP2Q9BYJ0 223 aa18.54■□□□□ 0.56
TRIM56-203ENST00000467847 MTMR12Q9C0I1 747 aa18.54■□□□□ 0.56
TRIM56-203ENST00000467847 PCIF1Q9H4Z3 704 aa18.54■□□□□ 0.56
TRIM56-203ENST00000467847 PDE11AQ9HCR9 933 aa18.54■□□□□ 0.56
TRIM56-203ENST00000467847 GDAP2Q9NXN4 497 aa18.54■□□□□ 0.56
TRIM56-203ENST00000467847 UXTQ9UBK9 157 aaPredicted RBP18.54■□□□□ 0.56
TRIM56-203ENST00000467847 GTF3C4Q9UKN8 822 aa18.54■□□□□ 0.56
TRIM56-203ENST00000467847 SNX9Q9Y5X1 595 aa18.54■□□□□ 0.56
TRIM56-203ENST00000467847 CHD8Q9HCK8 2581 aa18.53■□□□□ 0.56
TRIM56-203ENST00000467847 ZFHX4Q86UP3 3567 aa18.53■□□□□ 0.56
TRIM56-203ENST00000467847 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.53■□□□□ 0.56
TRIM56-203ENST00000467847 FRMD3A2A2Y4 597 aa18.53■□□□□ 0.56
TRIM56-203ENST00000467847 NOL4O94818 638 aa18.53■□□□□ 0.56
TRIM56-203ENST00000467847 TMEM191BP0C7N4 346 aa18.53■□□□□ 0.56
TRIM56-203ENST00000467847 ARSAP15289 507 aa18.53■□□□□ 0.56
TRIM56-203ENST00000467847 SYT1P21579 422 aa18.53■□□□□ 0.56
TRIM56-203ENST00000467847 AMPD2Q01433 879 aa18.53■□□□□ 0.56
TRIM56-203ENST00000467847 ZNF268Q14587 947 aaPredicted RBP18.53■□□□□ 0.56
TRIM56-203ENST00000467847 FSTL4Q6MZW2 842 aa18.53■□□□□ 0.56
TRIM56-203ENST00000467847 PKN3Q6P5Z2 889 aa18.53■□□□□ 0.56
TRIM56-203ENST00000467847 PRR23CQ6ZRP0 262 aa18.53■□□□□ 0.56
TRIM56-203ENST00000467847 SPATA2LQ8IUW3 424 aaPredicted RBP18.53■□□□□ 0.56
TRIM56-203ENST00000467847 ADGRF2Q8IZF7 708 aa18.53■□□□□ 0.56
TRIM56-203ENST00000467847 TRMT2BQ96GJ1 504 aaKnown RBP18.53■□□□□ 0.56
TRIM56-203ENST00000467847 PKMYT1Q99640 499 aa18.53■□□□□ 0.56
TRIM56-203ENST00000467847 TMEM206Q9H813 350 aa18.53■□□□□ 0.56
TRIM56-203ENST00000467847 TRPC7Q9HCX4 862 aa18.53■□□□□ 0.56
TRIM56-203ENST00000467847 SIX4Q9UIU6 781 aa18.53■□□□□ 0.56
TRIM56-203ENST00000467847 R3HCC1Q9Y3T6 440 aaKnown RBP18.53■□□□□ 0.56
TRIM56-203ENST00000467847 CHD6Q8TD26 2715 aa18.53■□□□□ 0.56
TRIM56-203ENST00000467847 ANAPC1Q9H1A4 1944 aa18.53■□□□□ 0.56
TRIM56-203ENST00000467847 A0A087X0B3 334 aa18.52■□□□□ 0.56
TRIM56-203ENST00000467847 TRDMT1O14717 391 aaKnown RBP18.52■□□□□ 0.56
TRIM56-203ENST00000467847 ATG13O75143 517 aa18.52■□□□□ 0.56
TRIM56-203ENST00000467847 TADA3O75528 432 aa18.52■□□□□ 0.56
TRIM56-203ENST00000467847 PRPF6O94906 941 aaKnown RBP18.52■□□□□ 0.56
TRIM56-203ENST00000467847 PCSK1P29120 753 aa18.52■□□□□ 0.56
TRIM56-203ENST00000467847 LHX1P48742 406 aa18.52■□□□□ 0.56
TRIM56-203ENST00000467847 PXNP49023 591 aaPredicted RBP18.52■□□□□ 0.56
TRIM56-203ENST00000467847 SLC39A14Q15043 492 aa18.52■□□□□ 0.56
TRIM56-203ENST00000467847 PDGFRLQ15198 375 aa18.52■□□□□ 0.56
TRIM56-203ENST00000467847 CCDC142Q17RM4 750 aa18.52■□□□□ 0.56
TRIM56-203ENST00000467847 OSTM1Q86WC4 334 aa18.52■□□□□ 0.56
TRIM56-203ENST00000467847 GPD1LQ8N335 351 aa18.52■□□□□ 0.56
TRIM56-203ENST00000467847 TOP6BLQ8N6T0 577 aa18.52■□□□□ 0.56
TRIM56-203ENST00000467847 TTC16Q8NEE8 873 aa18.52■□□□□ 0.56
TRIM56-203ENST00000467847 RIN3Q8TB24 985 aa18.52■□□□□ 0.56
TRIM56-203ENST00000467847 SPATA18Q8TC71 538 aa18.52■□□□□ 0.56
TRIM56-203ENST00000467847 CHFRQ96EP1 664 aa18.52■□□□□ 0.56
TRIM56-203ENST00000467847 SLC8A2Q9UPR5 921 aa18.52■□□□□ 0.56
TRIM56-203ENST00000467847 GREB1Q4ZG55 1949 aa18.52■□□□□ 0.56
TRIM56-203ENST00000467847 CFAP47Q6ZTR5 3102 aa18.51■□□□□ 0.55
TRIM56-203ENST00000467847 TRAV19A0A0A6YYK7 116 aa18.51■□□□□ 0.55
TRIM56-203ENST00000467847 SLC30A4O14863 429 aa18.51■□□□□ 0.55
TRIM56-203ENST00000467847 HCRTO43612 131 aa18.51■□□□□ 0.55
TRIM56-203ENST00000467847 MYO1EQ12965 1108 aa18.51■□□□□ 0.55
TRIM56-203ENST00000467847 SOWAHAQ2M3V2 549 aa18.51■□□□□ 0.55
TRIM56-203ENST00000467847 CFAP221Q4G0U5 840 aa18.51■□□□□ 0.55
TRIM56-203ENST00000467847 LMBRD2Q68DH5 695 aaPredicted RBP18.51■□□□□ 0.55
TRIM56-203ENST00000467847 SCN4BQ8IWT1 228 aa18.51■□□□□ 0.55
TRIM56-203ENST00000467847 CCDC65Q8IXS2 484 aa18.51■□□□□ 0.55
TRIM56-203ENST00000467847 CPA6Q8N4T0 437 aa18.51■□□□□ 0.55
TRIM56-203ENST00000467847 PDILTQ8N807 584 aa18.51■□□□□ 0.55
TRIM56-203ENST00000467847 ANKRD36BP1Q96IX9 119 aa18.51■□□□□ 0.55
TRIM56-203ENST00000467847 MYRFLQ96LU7 910 aa18.51■□□□□ 0.55
TRIM56-203ENST00000467847 USP28Q96RU2 1077 aa18.51■□□□□ 0.55
TRIM56-203ENST00000467847 MORC2Q9Y6X9 1032 aaPredicted RBP18.51■□□□□ 0.55
TRIM56-203ENST00000467847 MAP1BP46821 2468 aaKnown RBP18.51■□□□□ 0.55
TRIM56-203ENST00000467847 EML5Q05BV3 1969 aa18.5■□□□□ 0.55
TRIM56-203ENST00000467847 GABRDO14764 452 aa18.5■□□□□ 0.55
TRIM56-203ENST00000467847 KIAA0391O15091 583 aaKnown RBP18.5■□□□□ 0.55
TRIM56-203ENST00000467847 FOXD2O60548 495 aaPredicted RBP18.5■□□□□ 0.55
TRIM56-203ENST00000467847 RNF40O75150 1001 aa18.5■□□□□ 0.55
TRIM56-203ENST00000467847 RPP40O75818 363 aaKnown RBP18.5■□□□□ 0.55
TRIM56-203ENST00000467847 EGFP01133 1207 aa18.5■□□□□ 0.55
TRIM56-203ENST00000467847 TNNC2P02585 160 aa18.5■□□□□ 0.55
TRIM56-203ENST00000467847 CKMP06732 381 aa18.5■□□□□ 0.55
TRIM56-203ENST00000467847 USP17L7P0C7H9 530 aa18.5■□□□□ 0.55
TRIM56-203ENST00000467847 FAM160A1Q05DH4 1040 aa18.5■□□□□ 0.55
TRIM56-203ENST00000467847 MTF1Q14872 753 aa18.5■□□□□ 0.55
TRIM56-203ENST00000467847 STXBP4Q6ZWJ1 553 aa18.5■□□□□ 0.55
TRIM56-203ENST00000467847 GAB3Q8WWW8 586 aa18.5■□□□□ 0.55
TRIM56-203ENST00000467847 EXOC4Q96A65 974 aa18.5■□□□□ 0.55
TRIM56-203ENST00000467847 FUBP3Q96I24 572 aaKnown RBP eCLIP18.5■□□□□ 0.55
TRIM56-203ENST00000467847 HPDLQ96IR7 371 aa18.5■□□□□ 0.55
TRIM56-203ENST00000467847 CYP2S1Q96SQ9 504 aa18.5■□□□□ 0.55
TRIM56-203ENST00000467847 P2RY13Q9BPV8 354 aa18.5■□□□□ 0.55
TRIM56-203ENST00000467847 INTS13Q9NVM9 706 aa18.5■□□□□ 0.55
TRIM56-203ENST00000467847 DUS2Q9NX74 493 aaKnown RBP18.5■□□□□ 0.55
TRIM56-203ENST00000467847 PTPRJQ12913 1337 aa18.49■□□□□ 0.55
TRIM56-203ENST00000467847 CNOT1A5YKK6 2376 aaKnown RBP18.49■□□□□ 0.55
TRIM56-203ENST00000467847 HELZP42694 1942 aaKnown RBP18.49■□□□□ 0.55
TRIM56-203ENST00000467847 CCDC163A0A0D9SF12 145 aa18.49■□□□□ 0.55
TRIM56-203ENST00000467847 ZNF233A6NK53 670 aa18.49■□□□□ 0.55
TRIM56-203ENST00000467847 GDF9O60383 454 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms