RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 MSRAQ9UJ68 235 aa7.29□□□□□ -1.24
SCAF4-204ENST00000467731 GTF3C4Q9UKN8 822 aa7.29□□□□□ -1.24
SCAF4-204ENST00000467731 BZW2Q9Y6E2 419 aaKnown RBP7.29□□□□□ -1.24
SCAF4-204ENST00000467731 FAM170AA1A519 330 aa7.28□□□□□ -1.24
SCAF4-204ENST00000467731 MYBPHLA2RUH7 354 aa7.28□□□□□ -1.24
SCAF4-204ENST00000467731 C5orf67F2Z3F1 127 aa7.28□□□□□ -1.24
SCAF4-204ENST00000467731 CSPG5O95196 566 aa7.28□□□□□ -1.24
SCAF4-204ENST00000467731 OR4Q2P0C623 313 aa7.28□□□□□ -1.24
SCAF4-204ENST00000467731 CCDC130P13994 396 aa7.28□□□□□ -1.24
SCAF4-204ENST00000467731 PTPN1P18031 435 aaKnown RBP7.28□□□□□ -1.24
SCAF4-204ENST00000467731 DNAJB2P25686 324 aa7.28□□□□□ -1.24
SCAF4-204ENST00000467731 EIF4A3P38919 411 aaKnown RBP7.28□□□□□ -1.24
SCAF4-204ENST00000467731 MTF1Q14872 753 aa7.28□□□□□ -1.24
SCAF4-204ENST00000467731 CTXN3Q4LDR2 81 aa7.28□□□□□ -1.24
SCAF4-204ENST00000467731 SGO2Q562F6 1265 aa7.28□□□□□ -1.24
SCAF4-204ENST00000467731 INTS6LQ5JSJ4 861 aaKnown RBP7.28□□□□□ -1.24
SCAF4-204ENST00000467731 PPP2R2DQ66LE6 453 aa7.28□□□□□ -1.24
SCAF4-204ENST00000467731 SMYD5Q6GMV2 418 aa7.28□□□□□ -1.24
SCAF4-204ENST00000467731 ANKS3Q6ZW76 656 aa7.28□□□□□ -1.24
SCAF4-204ENST00000467731 PALB2Q86YC2 1186 aa7.28□□□□□ -1.24
SCAF4-204ENST00000467731 TMTC1Q8IUR5 882 aa7.28□□□□□ -1.24
SCAF4-204ENST00000467731 GLYCTKQ8IVS8 523 aa7.28□□□□□ -1.24
SCAF4-204ENST00000467731 CCDC112Q8NEF3 446 aa7.28□□□□□ -1.24
SCAF4-204ENST00000467731 OLIG1Q8TAK6 271 aa7.28□□□□□ -1.24
SCAF4-204ENST00000467731 AUTS2Q8WXX7 1259 aa7.28□□□□□ -1.24
SCAF4-204ENST00000467731 RIN2Q8WYP3 895 aaPredicted RBP7.28□□□□□ -1.24
SCAF4-204ENST00000467731 SYT11Q9BT88 431 aa7.28□□□□□ -1.24
SCAF4-204ENST00000467731 NKX2-4Q9H2Z4 354 aa7.28□□□□□ -1.24
SCAF4-204ENST00000467731 DEF6Q9H4E7 631 aa7.28□□□□□ -1.24
SCAF4-204ENST00000467731 CERS4Q9HA82 394 aa7.28□□□□□ -1.24
SCAF4-204ENST00000467731 SEPT11Q9NVA2 429 aaKnown RBP7.28□□□□□ -1.24
SCAF4-204ENST00000467731 ADAMTS1Q9UHI8 967 aa7.28□□□□□ -1.24
SCAF4-204ENST00000467731 CDH9Q9ULB4 789 aa7.28□□□□□ -1.24
SCAF4-204ENST00000467731 SSU72P8A0A1W2PR75 194 aa7.28□□□□□ -1.24
SCAF4-204ENST00000467731 URODP06132 367 aa7.28□□□□□ -1.24
SCAF4-204ENST00000467731 VDRP11473 427 aa7.28□□□□□ -1.24
SCAF4-204ENST00000467731 CHRNB2P17787 502 aa7.28□□□□□ -1.24
SCAF4-204ENST00000467731 RPL17P18621 184 aaKnown RBP7.28□□□□□ -1.24
SCAF4-204ENST00000467731 GLUD2P49448 558 aa7.28□□□□□ -1.24
SCAF4-204ENST00000467731 TSPY1Q01534 308 aa7.28□□□□□ -1.24
SCAF4-204ENST00000467731 FMO1Q01740 532 aa7.28□□□□□ -1.24
SCAF4-204ENST00000467731 CDR2Q01850 454 aa7.28□□□□□ -1.24
SCAF4-204ENST00000467731 DSG1Q02413 1049 aa7.28□□□□□ -1.24
SCAF4-204ENST00000467731 RAB30Q15771 203 aa7.28□□□□□ -1.24
SCAF4-204ENST00000467731 PSMD5Q16401 504 aa7.28□□□□□ -1.24
SCAF4-204ENST00000467731 MDH1BQ5I0G3 518 aa7.28□□□□□ -1.24
SCAF4-204ENST00000467731 RSPO2Q6UXX9 243 aaPredicted RBP7.28□□□□□ -1.24
SCAF4-204ENST00000467731 LRRTM3Q86VH5 581 aa7.28□□□□□ -1.24
SCAF4-204ENST00000467731 ZNF677Q86XU0 584 aa7.28□□□□□ -1.24
SCAF4-204ENST00000467731 PIK3R5Q8WYR1 880 aa7.28□□□□□ -1.24
SCAF4-204ENST00000467731 CYFIP2Q96F07 1278 aa7.28□□□□□ -1.24
SCAF4-204ENST00000467731 PCED1BQ96HM7 432 aa7.28□□□□□ -1.24
SCAF4-204ENST00000467731 CCDC42Q96M95 316 aa7.28□□□□□ -1.24
SCAF4-204ENST00000467731 AGPAT1Q99943 283 aa7.28□□□□□ -1.24
SCAF4-204ENST00000467731 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.28□□□□□ -1.24
SCAF4-204ENST00000467731 HERC2P3Q9BVR0 1158 aa7.28□□□□□ -1.24
SCAF4-204ENST00000467731 ZBP1Q9H171 429 aa7.28□□□□□ -1.24
SCAF4-204ENST00000467731 TSPAN16Q9UKR8 245 aa7.28□□□□□ -1.24
SCAF4-204ENST00000467731 A0A087X0T9 212 aa7.27□□□□□ -1.25
SCAF4-204ENST00000467731 H7C4K7 107 aa7.27□□□□□ -1.25
SCAF4-204ENST00000467731 O00370 1275 aa7.27□□□□□ -1.25
SCAF4-204ENST00000467731 TBC1D4O60343 1298 aa7.27□□□□□ -1.25
SCAF4-204ENST00000467731 FAM228BP0C875 321 aa7.27□□□□□ -1.25
SCAF4-204ENST00000467731 TNNT1P13805 278 aa7.27□□□□□ -1.25
SCAF4-204ENST00000467731 DNAJB1P25685 340 aa7.27□□□□□ -1.25
SCAF4-204ENST00000467731 KIF11P52732 1056 aa7.27□□□□□ -1.25
SCAF4-204ENST00000467731 GSCP56915 257 aaPredicted RBP7.27□□□□□ -1.25
SCAF4-204ENST00000467731 ERVK-21P61565 698 aa7.27□□□□□ -1.25
SCAF4-204ENST00000467731 GFPT1Q06210 699 aaPredicted RBP7.27□□□□□ -1.25
SCAF4-204ENST00000467731 BMS1Q14692 1282 aaKnown RBP7.27□□□□□ -1.25
SCAF4-204ENST00000467731 ASTE1Q2TB18 679 aaPredicted RBP7.27□□□□□ -1.25
SCAF4-204ENST00000467731 RAD9BQ6WBX8 426 aa7.27□□□□□ -1.25
SCAF4-204ENST00000467731 DNAJC14Q6Y2X3 702 aaPredicted RBP7.27□□□□□ -1.25
SCAF4-204ENST00000467731 PASD1Q8IV76 773 aa7.27□□□□□ -1.25
SCAF4-204ENST00000467731 FBXO22Q8NEZ5 403 aa7.27□□□□□ -1.25
SCAF4-204ENST00000467731 MYCBPAPQ8TBZ2 947 aa7.27□□□□□ -1.25
SCAF4-204ENST00000467731 SPPL3Q8TCT6 385 aa7.27□□□□□ -1.25
SCAF4-204ENST00000467731 SLC2A14Q8TDB8 520 aa7.27□□□□□ -1.25
SCAF4-204ENST00000467731 POF1BQ8WVV4 589 aa7.27□□□□□ -1.25
SCAF4-204ENST00000467731 C11orf84Q9BUA3 381 aaPredicted RBP7.27□□□□□ -1.25
SCAF4-204ENST00000467731 SLC28A3Q9HAS3 691 aa7.27□□□□□ -1.25
SCAF4-204ENST00000467731 SPTLC3Q9NUV7 552 aa7.27□□□□□ -1.25
SCAF4-204ENST00000467731 TMLHEQ9NVH6 421 aa7.27□□□□□ -1.25
SCAF4-204ENST00000467731 MTRRQ9UBK8 725 aa7.27□□□□□ -1.25
SCAF4-204ENST00000467731 STK39Q9UEW8 545 aa7.27□□□□□ -1.25
SCAF4-204ENST00000467731 KIAA1257Q9ULG3 409 aa7.27□□□□□ -1.25
SCAF4-204ENST00000467731 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.27□□□□□ -1.25
SCAF4-204ENST00000467731 CDY1Q9Y6F8 540 aa7.27□□□□□ -1.25
SCAF4-204ENST00000467731 CLDN5O00501 218 aa7.27□□□□□ -1.25
SCAF4-204ENST00000467731 DDX3XO00571 662 aaKnown RBP eCLIP7.27□□□□□ -1.25
SCAF4-204ENST00000467731 ARHGAP6O43182 974 aa7.27□□□□□ -1.25
SCAF4-204ENST00000467731 AKR1B10O60218 316 aa7.27□□□□□ -1.25
SCAF4-204ENST00000467731 IPO7O95373 1038 aaKnown RBP7.27□□□□□ -1.25
SCAF4-204ENST00000467731 RB1P06400 928 aa7.27□□□□□ -1.25
SCAF4-204ENST00000467731 ADORA2BP29275 332 aa7.27□□□□□ -1.25
SCAF4-204ENST00000467731 CASQ1P31415 396 aa7.27□□□□□ -1.25
SCAF4-204ENST00000467731 CA8P35219 290 aa7.27□□□□□ -1.25
SCAF4-204ENST00000467731 ARPP19P56211 112 aa7.27□□□□□ -1.25
SCAF4-204ENST00000467731 ERVFC1P60507 584 aa7.27□□□□□ -1.25
SCAF4-204ENST00000467731 PTPN14Q15678 1187 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms