RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 SPAG5Q96R06 1193 aa17■□□□□ 0.31
GPC1-207ENST00000466624 HNRNPABQ99729 332 aaKnown RBP17■□□□□ 0.31
GPC1-207ENST00000466624 B3GNT5Q9BYG0 378 aa17■□□□□ 0.31
GPC1-207ENST00000466624 CYP4F11Q9HBI6 524 aa17■□□□□ 0.31
GPC1-207ENST00000466624 ZDHHC7Q9NXF8 308 aa17■□□□□ 0.31
GPC1-207ENST00000466624 ABI2Q9NYB9 513 aaPredicted RBP17■□□□□ 0.31
GPC1-207ENST00000466624 A0A1W2PQJ5 194 aa16.99■□□□□ 0.31
GPC1-207ENST00000466624 FOXN3O00409 490 aaPredicted RBP16.99■□□□□ 0.31
GPC1-207ENST00000466624 LINC01565O15544 149 aa16.99■□□□□ 0.31
GPC1-207ENST00000466624 SEC24AO95486 1093 aa16.99■□□□□ 0.31
GPC1-207ENST00000466624 C8AP07357 584 aa16.99■□□□□ 0.31
GPC1-207ENST00000466624 HNRNPA1P09651 372 aaKnown RBP eCLIP16.99■□□□□ 0.31
GPC1-207ENST00000466624 HAPLN1P10915 354 aaPredicted RBP16.99■□□□□ 0.31
GPC1-207ENST00000466624 HOXB8P17481 243 aaPredicted RBP16.99■□□□□ 0.31
GPC1-207ENST00000466624 BPIFB4P59827 614 aa16.99■□□□□ 0.31
GPC1-207ENST00000466624 CYP27A1Q02318 531 aa16.99■□□□□ 0.31
GPC1-207ENST00000466624 DUSP4Q13115 394 aa16.99■□□□□ 0.31
GPC1-207ENST00000466624 PLD1Q13393 1074 aa16.99■□□□□ 0.31
GPC1-207ENST00000466624 MEA1Q16626 185 aa16.99■□□□□ 0.31
GPC1-207ENST00000466624 CCDC142Q17RM4 750 aa16.99■□□□□ 0.31
GPC1-207ENST00000466624 SGO2Q562F6 1265 aa16.99■□□□□ 0.31
GPC1-207ENST00000466624 SPECC1LQ69YQ0 1117 aa16.99■□□□□ 0.31
GPC1-207ENST00000466624 ANKRD54Q6NXT1 300 aa16.99■□□□□ 0.31
GPC1-207ENST00000466624 LLGL2Q6P1M3 1020 aa16.99■□□□□ 0.31
GPC1-207ENST00000466624 PAQR9Q6ZVX9 377 aa16.99■□□□□ 0.31
GPC1-207ENST00000466624 CACNA2D4Q7Z3S7 1137 aa16.99■□□□□ 0.31
GPC1-207ENST00000466624 FAM35AQ86V20 835 aa16.99■□□□□ 0.31
GPC1-207ENST00000466624 VSTM4Q8IW00 320 aa16.99■□□□□ 0.31
GPC1-207ENST00000466624 FUKQ8N0W3 1084 aa16.99■□□□□ 0.31
GPC1-207ENST00000466624 C12orf29Q8N999 325 aa16.99■□□□□ 0.31
GPC1-207ENST00000466624 CMASQ8NFW8 434 aaPredicted RBP16.99■□□□□ 0.31
GPC1-207ENST00000466624 SLC7A14Q8TBB6 771 aa16.99■□□□□ 0.31
GPC1-207ENST00000466624 CYFIP2Q96F07 1278 aa16.99■□□□□ 0.31
GPC1-207ENST00000466624 MRFAP1L1Q96HT8 127 aa16.99■□□□□ 0.31
GPC1-207ENST00000466624 RHOBTB2Q9BYZ6 727 aa16.99■□□□□ 0.31
GPC1-207ENST00000466624 CRISPLD1Q9H336 500 aa16.99■□□□□ 0.31
GPC1-207ENST00000466624 SFXN1Q9H9B4 322 aa16.99■□□□□ 0.31
GPC1-207ENST00000466624 NLRC4Q9NPP4 1024 aa16.99■□□□□ 0.31
GPC1-207ENST00000466624 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.99■□□□□ 0.31
GPC1-207ENST00000466624 INSL5Q9Y5Q6 135 aa16.99■□□□□ 0.31
GPC1-207ENST00000466624 GREB1Q4ZG55 1949 aa16.99■□□□□ 0.31
GPC1-207ENST00000466624 BRWD1Q9NSI6 2320 aa16.98■□□□□ 0.31
GPC1-207ENST00000466624 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.98■□□□□ 0.31
GPC1-207ENST00000466624 PRRG1O14668 218 aa16.98■□□□□ 0.31
GPC1-207ENST00000466624 SPATA31D3P0C874 917 aa16.98■□□□□ 0.31
GPC1-207ENST00000466624 SOX5P35711 763 aa16.98■□□□□ 0.31
GPC1-207ENST00000466624 STAT1P42224 750 aa16.98■□□□□ 0.31
GPC1-207ENST00000466624 PTK2Q05397 1052 aa16.98■□□□□ 0.31
GPC1-207ENST00000466624 TRIM14Q14142 442 aa16.98■□□□□ 0.31
GPC1-207ENST00000466624 PTPN21Q16825 1174 aa16.98■□□□□ 0.31
GPC1-207ENST00000466624 PPM1LQ5SGD2 360 aa16.98■□□□□ 0.31
GPC1-207ENST00000466624 CYP26C1Q6V0L0 522 aa16.98■□□□□ 0.31
GPC1-207ENST00000466624 SPATA31D4Q6ZUB0 917 aa16.98■□□□□ 0.31
GPC1-207ENST00000466624 SLC2A14Q8TDB8 520 aa16.98■□□□□ 0.31
GPC1-207ENST00000466624 BAP1Q92560 729 aa16.98■□□□□ 0.31
GPC1-207ENST00000466624 SMARCD1Q96GM5 515 aa16.98■□□□□ 0.31
GPC1-207ENST00000466624 LPIN3Q9BQK8 851 aa16.98■□□□□ 0.31
GPC1-207ENST00000466624 FAM49BQ9NUQ9 324 aa16.98■□□□□ 0.31
GPC1-207ENST00000466624 CLDND1Q9NY35 253 aa16.98■□□□□ 0.31
GPC1-207ENST00000466624 CLEC1BQ9P126 229 aa16.98■□□□□ 0.31
GPC1-207ENST00000466624 YIPF1Q9Y548 306 aa16.98■□□□□ 0.31
GPC1-207ENST00000466624 C2orf16Q68DN1 1984 aa16.97■□□□□ 0.31
GPC1-207ENST00000466624 O00370 1275 aa16.97■□□□□ 0.31
GPC1-207ENST00000466624 TRIM66O15016 1216 aa16.97■□□□□ 0.31
GPC1-207ENST00000466624 TBX10O75333 385 aa16.97■□□□□ 0.31
GPC1-207ENST00000466624 CCDC130P13994 396 aa16.97■□□□□ 0.31
GPC1-207ENST00000466624 CD19P15391 556 aa16.97■□□□□ 0.31
GPC1-207ENST00000466624 BDNFP23560 247 aa16.97■□□□□ 0.31
GPC1-207ENST00000466624 CYP2F1P24903 491 aa16.97■□□□□ 0.31
GPC1-207ENST00000466624 GNA15P30679 374 aa16.97■□□□□ 0.31
GPC1-207ENST00000466624 CLCN1P35523 988 aa16.97■□□□□ 0.31
GPC1-207ENST00000466624 LTBRP36941 435 aa16.97■□□□□ 0.31
GPC1-207ENST00000466624 USP8P40818 1118 aa16.97■□□□□ 0.31
GPC1-207ENST00000466624 ZNF75DP51815 510 aa16.97■□□□□ 0.31
GPC1-207ENST00000466624 RPL10AP62906 217 aaKnown RBP16.97■□□□□ 0.31
GPC1-207ENST00000466624 RBM10P98175 930 aaKnown RBP16.97■□□□□ 0.31
GPC1-207ENST00000466624 CCDC85BQ15834 202 aaPredicted RBP16.97■□□□□ 0.31
GPC1-207ENST00000466624 CNGA2Q16280 664 aa16.97■□□□□ 0.31
GPC1-207ENST00000466624 MGAT5BQ3V5L5 792 aa16.97■□□□□ 0.31
GPC1-207ENST00000466624 PPP1R26Q5T8A7 1209 aaPredicted RBP16.97■□□□□ 0.31
GPC1-207ENST00000466624 MAFAQ8NHW3 353 aaPredicted RBP16.97■□□□□ 0.31
GPC1-207ENST00000466624 SEPT5Q99719 369 aaPredicted RBP16.97■□□□□ 0.31
GPC1-207ENST00000466624 MED10Q9BTT4 135 aa16.97■□□□□ 0.31
GPC1-207ENST00000466624 ZNF518BQ9C0D4 1074 aa16.97■□□□□ 0.31
GPC1-207ENST00000466624 NUCKS1Q9H1E3 243 aaKnown RBP16.97■□□□□ 0.31
GPC1-207ENST00000466624 CSNK1G1Q9HCP0 422 aa16.97■□□□□ 0.31
GPC1-207ENST00000466624 SLC27A5Q9Y2P5 690 aa16.97■□□□□ 0.31
GPC1-207ENST00000466624 REV3LO60673 3130 aa16.96■□□□□ 0.31
GPC1-207ENST00000466624 CYP26A1O43174 497 aa16.96■□□□□ 0.31
GPC1-207ENST00000466624 MED7O43513 233 aa16.96■□□□□ 0.31
GPC1-207ENST00000466624 LRG1P02750 347 aa16.96■□□□□ 0.31
GPC1-207ENST00000466624 CCDC172P0C7W6 258 aa16.96■□□□□ 0.31
GPC1-207ENST00000466624 FAM200BP0CF97 657 aa16.96■□□□□ 0.31
GPC1-207ENST00000466624 ALDH1A3P47895 512 aa16.96■□□□□ 0.31
GPC1-207ENST00000466624 LCLAT1Q6UWP7 414 aa16.96■□□□□ 0.31
GPC1-207ENST00000466624 TTC9BQ8N6N2 239 aa16.96■□□□□ 0.31
GPC1-207ENST00000466624 ANKRD52Q8NB46 1076 aa16.96■□□□□ 0.31
GPC1-207ENST00000466624 TFAP2BQ92481 460 aa16.96■□□□□ 0.31
GPC1-207ENST00000466624 MSLNLQ96KJ4 702 aa16.96■□□□□ 0.31
GPC1-207ENST00000466624 SPATA17Q96L03 361 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms