RNA–Protein interactions for RNA: ENST00000465643.1

CDK13-203, Transcript of cyclin dependent kinase 13, humanhuman

TSL 1 (best)

Gene CDK13, Length 2,394 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-203ENST00000465643 IGDCC3Q8IVU1 814 aa5.32□□□□□ -1.56
CDK13-203ENST00000465643 SUGP1Q8IWZ8 645 aaKnown RBP5.32□□□□□ -1.56
CDK13-203ENST00000465643 SYTL1Q8IYJ3 562 aa5.32□□□□□ -1.56
CDK13-203ENST00000465643 GIMAP8Q8ND71 665 aaPredicted RBP5.32□□□□□ -1.56
CDK13-203ENST00000465643 NUDT10Q8NFP7 164 aa5.32□□□□□ -1.56
CDK13-203ENST00000465643 MDM1Q8TC05 714 aa5.32□□□□□ -1.56
CDK13-203ENST00000465643 NUDT11Q96G61 164 aa5.32□□□□□ -1.56
CDK13-203ENST00000465643 MASTLQ96GX5 879 aa5.32□□□□□ -1.56
CDK13-203ENST00000465643 TTLL2Q9BWV7 592 aa5.32□□□□□ -1.56
CDK13-203ENST00000465643 PLA2G12BQ9BX93 195 aa5.32□□□□□ -1.56
CDK13-203ENST00000465643 AS3MTQ9HBK9 375 aa5.32□□□□□ -1.56
CDK13-203ENST00000465643 SPATA6Q9NWH7 488 aaPredicted RBP5.32□□□□□ -1.56
CDK13-203ENST00000465643 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.32□□□□□ -1.56
CDK13-203ENST00000465643 FAM184BQ9ULE4 1060 aa5.32□□□□□ -1.56
CDK13-203ENST00000465643 GTF2A1LQ9UNN4 478 aa5.32□□□□□ -1.56
CDK13-203ENST00000465643 RBM8AQ9Y5S9 174 aaKnown RBP5.32□□□□□ -1.56
CDK13-203ENST00000465643 N4BP2Q86UW6 1770 aaPredicted RBP5.32□□□□□ -1.56
CDK13-203ENST00000465643 NRXN2Q9P2S2 1712 aa5.32□□□□□ -1.56
CDK13-203ENST00000465643 A0A1W2PPC4 97 aa5.31□□□□□ -1.56
CDK13-203ENST00000465643 SLC26A4O43511 780 aa5.31□□□□□ -1.56
CDK13-203ENST00000465643 TLR5O60602 858 aa5.31□□□□□ -1.56
CDK13-203ENST00000465643 AGR2O95994 175 aa5.31□□□□□ -1.56
CDK13-203ENST00000465643 HMGCRP04035 888 aa5.31□□□□□ -1.56
CDK13-203ENST00000465643 CD1AP06126 327 aa5.31□□□□□ -1.56
CDK13-203ENST00000465643 IGHMBP2P38935 993 aaKnown RBP5.31□□□□□ -1.56
CDK13-203ENST00000465643 TECP42680 631 aa5.31□□□□□ -1.56
CDK13-203ENST00000465643 GRK6P43250 576 aa5.31□□□□□ -1.56
CDK13-203ENST00000465643 ALDH1A3P47895 512 aa5.31□□□□□ -1.56
CDK13-203ENST00000465643 RRADP55042 308 aa5.31□□□□□ -1.56
CDK13-203ENST00000465643 SOX8P57073 446 aa5.31□□□□□ -1.56
CDK13-203ENST00000465643 STARD3Q14849 445 aa5.31□□□□□ -1.56
CDK13-203ENST00000465643 SF3B3Q15393 1217 aaKnown RBP5.31□□□□□ -1.56
CDK13-203ENST00000465643 MAN2A1Q16706 1144 aa5.31□□□□□ -1.56
CDK13-203ENST00000465643 ARL13BQ3SXY8 428 aa5.31□□□□□ -1.56
CDK13-203ENST00000465643 TRMT10BQ6PF06 316 aaKnown RBP5.31□□□□□ -1.56
CDK13-203ENST00000465643 LVRNQ6Q4G3 990 aa5.31□□□□□ -1.56
CDK13-203ENST00000465643 ANKRD18AQ8IVF6 992 aa5.31□□□□□ -1.56
CDK13-203ENST00000465643 ANKRD44Q8N8A2 993 aa5.31□□□□□ -1.56
CDK13-203ENST00000465643 ZNF527Q8NB42 609 aa5.31□□□□□ -1.56
CDK13-203ENST00000465643 KYQ8NBH2 561 aa5.31□□□□□ -1.56
CDK13-203ENST00000465643 KAZALD1Q96I82 304 aa5.31□□□□□ -1.56
CDK13-203ENST00000465643 FAM167AQ96KS9 214 aa5.31□□□□□ -1.56
CDK13-203ENST00000465643 PPP1R16BQ96T49 567 aa5.31□□□□□ -1.56
CDK13-203ENST00000465643 TMX4Q9H1E5 349 aaPredicted RBP5.31□□□□□ -1.56
CDK13-203ENST00000465643 MYLK2Q9H1R3 596 aa5.31□□□□□ -1.56
CDK13-203ENST00000465643 LANCL2Q9NS86 450 aa5.31□□□□□ -1.56
CDK13-203ENST00000465643 ZBTB40Q9NUA8 1239 aa5.31□□□□□ -1.56
CDK13-203ENST00000465643 PIH1D1Q9NWS0 290 aaKnown RBP5.31□□□□□ -1.56
CDK13-203ENST00000465643 SIRT5Q9NXA8 310 aa5.31□□□□□ -1.56
CDK13-203ENST00000465643 GRHPRQ9UBQ7 328 aa5.31□□□□□ -1.56
CDK13-203ENST00000465643 MBD1Q9UIS9 605 aaPredicted RBP5.31□□□□□ -1.56
CDK13-203ENST00000465643 PADI4Q9UM07 663 aa5.31□□□□□ -1.56
CDK13-203ENST00000465643 TNRC6CQ9HCJ0 1690 aaKnown RBP5.31□□□□□ -1.56
CDK13-203ENST00000465643 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.31□□□□□ -1.56
CDK13-203ENST00000465643 ADAMTS3O15072 1205 aa5.31□□□□□ -1.56
CDK13-203ENST00000465643 MATN4O95460 622 aa5.31□□□□□ -1.56
CDK13-203ENST00000465643 CSF1RP07333 972 aa5.31□□□□□ -1.56
CDK13-203ENST00000465643 GLI1P08151 1106 aa5.31□□□□□ -1.56
CDK13-203ENST00000465643 EN2P19622 333 aaPredicted RBP5.31□□□□□ -1.56
CDK13-203ENST00000465643 IGFBP6P24592 240 aaPredicted RBP5.31□□□□□ -1.56
CDK13-203ENST00000465643 ALDH1B1P30837 517 aa5.31□□□□□ -1.56
CDK13-203ENST00000465643 TOP3AQ13472 1001 aaPredicted RBP5.31□□□□□ -1.56
CDK13-203ENST00000465643 GRAPQ13588 217 aa5.31□□□□□ -1.56
CDK13-203ENST00000465643 PDCD2Q16342 344 aaPredicted RBP5.31□□□□□ -1.56
CDK13-203ENST00000465643 GRAPLQ8TC17 118 aaPredicted RBP5.31□□□□□ -1.56
CDK13-203ENST00000465643 BRIX1Q8TDN6 353 aaKnown RBP5.31□□□□□ -1.56
CDK13-203ENST00000465643 CDC5LQ99459 802 aaKnown RBP5.31□□□□□ -1.56
CDK13-203ENST00000465643 EIF2AK1Q9BQI3 630 aaKnown RBP5.31□□□□□ -1.56
CDK13-203ENST00000465643 SYT17Q9BSW7 474 aa5.31□□□□□ -1.56
CDK13-203ENST00000465643 TRIM54Q9BYV2 358 aa5.31□□□□□ -1.56
CDK13-203ENST00000465643 DDX60Q8IY21 1712 aaKnown RBP5.31□□□□□ -1.56
CDK13-203ENST00000465643 RIC1Q4ADV7 1423 aa5.31□□□□□ -1.56
CDK13-203ENST00000465643 ANKRD31Q8N7Z5 1873 aa5.3□□□□□ -1.56
CDK13-203ENST00000465643 PRSS29PA6NIE9 313 aa5.3□□□□□ -1.56
CDK13-203ENST00000465643 HMMRO75330 724 aa5.3□□□□□ -1.56
CDK13-203ENST00000465643 ARIH2O95376 493 aa5.3□□□□□ -1.56
CDK13-203ENST00000465643 ARFIP2P53365 341 aa5.3□□□□□ -1.56
CDK13-203ENST00000465643 RABL6Q3YEC7 729 aaPredicted RBP5.3□□□□□ -1.56
CDK13-203ENST00000465643 CRY2Q49AN0 593 aa5.3□□□□□ -1.56
CDK13-203ENST00000465643 ALFQ53S48 1182 aa5.3□□□□□ -1.56
CDK13-203ENST00000465643 TRIM68Q6AZZ1 485 aa5.3□□□□□ -1.56
CDK13-203ENST00000465643 CEP85Q6P2H3 762 aa5.3□□□□□ -1.56
CDK13-203ENST00000465643 SAPCD2Q86UD0 394 aa5.3□□□□□ -1.56
CDK13-203ENST00000465643 TTLL6Q8N841 843 aa5.3□□□□□ -1.56
CDK13-203ENST00000465643 SPATA5Q8NB90 893 aa5.3□□□□□ -1.56
CDK13-203ENST00000465643 BRI3BPQ8WY22 251 aa5.3□□□□□ -1.56
CDK13-203ENST00000465643 CELF1Q92879 486 aaKnown RBP5.3□□□□□ -1.56
CDK13-203ENST00000465643 TBC1D20Q96BZ9 403 aa5.3□□□□□ -1.56
CDK13-203ENST00000465643 CYFIP2Q96F07 1278 aa5.3□□□□□ -1.56
CDK13-203ENST00000465643 TMEM41AQ96HV5 264 aa5.3□□□□□ -1.56
CDK13-203ENST00000465643 CRAMP1Q96RY5 1269 aa5.3□□□□□ -1.56
CDK13-203ENST00000465643 MPHOSPH8Q99549 860 aa5.3□□□□□ -1.56
CDK13-203ENST00000465643 WDCPQ9H6R7 721 aa5.3□□□□□ -1.56
CDK13-203ENST00000465643 CNNM1Q9NRU3 951 aa5.3□□□□□ -1.56
CDK13-203ENST00000465643 AFF4Q9UHB7 1163 aaKnown RBP5.3□□□□□ -1.56
CDK13-203ENST00000465643 LAMB2P55268 1798 aa5.3□□□□□ -1.56
CDK13-203ENST00000465643 PNMA6EA0A0J9YXQ4 647 aa5.3□□□□□ -1.56
CDK13-203ENST00000465643 ZNF503-AS2A6NEH8 195 aa5.3□□□□□ -1.56
CDK13-203ENST00000465643 TMEM233B4DJY2 109 aa5.3□□□□□ -1.56
CDK13-203ENST00000465643 DAPK3O43293 454 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms