RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 CPLX2Q6PUV4 134 aaKnown RBP16.21■□□□□ 0.19
HDAC6-214ENST00000465269 RUFY3Q7L099 469 aa16.21■□□□□ 0.19
HDAC6-214ENST00000465269 MON1AQ86VX9 555 aa16.21■□□□□ 0.19
HDAC6-214ENST00000465269 KIFAP3Q92845 792 aa16.21■□□□□ 0.19
HDAC6-214ENST00000465269 ERLEC1Q96DZ1 483 aa16.21■□□□□ 0.19
HDAC6-214ENST00000465269 ZNF274Q96GC6 653 aaPredicted RBP16.21■□□□□ 0.19
HDAC6-214ENST00000465269 SPACA7Q96KW9 195 aa16.21■□□□□ 0.19
HDAC6-214ENST00000465269 OXCT2Q9BYC2 517 aaPredicted RBP16.21■□□□□ 0.19
HDAC6-214ENST00000465269 ZCWPW1Q9H0M4 648 aa16.21■□□□□ 0.19
HDAC6-214ENST00000465269 KIF9Q9HAQ2 790 aa16.21■□□□□ 0.19
HDAC6-214ENST00000465269 SPTA1P02549 2419 aa16.21■□□□□ 0.19
HDAC6-214ENST00000465269 SFI1A8K8P3 1242 aa16.2■□□□□ 0.18
HDAC6-214ENST00000465269 SERPINF2P08697 491 aa16.2■□□□□ 0.18
HDAC6-214ENST00000465269 HAPLN1P10915 354 aaPredicted RBP16.2■□□□□ 0.18
HDAC6-214ENST00000465269 CHRM1P11229 460 aaPredicted RBP16.2■□□□□ 0.18
HDAC6-214ENST00000465269 TYMPP19971 482 aa16.2■□□□□ 0.18
HDAC6-214ENST00000465269 MCM7P33993 719 aa16.2■□□□□ 0.18
HDAC6-214ENST00000465269 LILRA4P59901 499 aa16.2■□□□□ 0.18
HDAC6-214ENST00000465269 CYP4F3Q08477 520 aa16.2■□□□□ 0.18
HDAC6-214ENST00000465269 NBR1Q14596 966 aa16.2■□□□□ 0.18
HDAC6-214ENST00000465269 NOLC1Q14978 699 aaKnown RBP eCLIP16.2■□□□□ 0.18
HDAC6-214ENST00000465269 ZBTB6Q15916 424 aa16.2■□□□□ 0.18
HDAC6-214ENST00000465269 PEAR1Q5VY43 1037 aaPredicted RBP16.2■□□□□ 0.18
HDAC6-214ENST00000465269 PGBD3Q8N328 593 aa16.2■□□□□ 0.18
HDAC6-214ENST00000465269 IL17RCQ8NAC3 791 aa16.2■□□□□ 0.18
HDAC6-214ENST00000465269 WHAMMQ8TF30 809 aa16.2■□□□□ 0.18
HDAC6-214ENST00000465269 SLC39A7Q92504 469 aa16.2■□□□□ 0.18
HDAC6-214ENST00000465269 MRPS31Q92665 395 aaKnown RBP16.2■□□□□ 0.18
HDAC6-214ENST00000465269 ATP2A3Q93084 1043 aa16.2■□□□□ 0.18
HDAC6-214ENST00000465269 TMLHEQ9NVH6 421 aa16.2■□□□□ 0.18
HDAC6-214ENST00000465269 ARHGAP28Q9P2N2 729 aa16.2■□□□□ 0.18
HDAC6-214ENST00000465269 PCDHB9Q9Y5E1 797 aa16.2■□□□□ 0.18
HDAC6-214ENST00000465269 CEP192Q8TEP8 1941 aa16.19■□□□□ 0.18
HDAC6-214ENST00000465269 LACTBL1A8MY62 500 aa16.19■□□□□ 0.18
HDAC6-214ENST00000465269 BTBD18B2RXH4 712 aa16.19■□□□□ 0.18
HDAC6-214ENST00000465269 ARHGAP33O14559 1287 aa16.19■□□□□ 0.18
HDAC6-214ENST00000465269 HIP1RO75146 1068 aa16.19■□□□□ 0.18
HDAC6-214ENST00000465269 CDC45O75419 566 aa16.19■□□□□ 0.18
HDAC6-214ENST00000465269 ALDH1A2O94788 518 aa16.19■□□□□ 0.18
HDAC6-214ENST00000465269 CTDNEP1O95476 244 aa16.19■□□□□ 0.18
HDAC6-214ENST00000465269 ODC1P11926 461 aa16.19■□□□□ 0.18
HDAC6-214ENST00000465269 RPA1P27694 616 aa16.19■□□□□ 0.18
HDAC6-214ENST00000465269 SLC6A11P48066 632 aa16.19■□□□□ 0.18
HDAC6-214ENST00000465269 RPL6Q02878 288 aaKnown RBP16.19■□□□□ 0.18
HDAC6-214ENST00000465269 USP4Q13107 963 aa16.19■□□□□ 0.18
HDAC6-214ENST00000465269 NAXDQ8IW45 347 aa16.19■□□□□ 0.18
HDAC6-214ENST00000465269 PIP4K2CQ8TBX8 421 aa16.19■□□□□ 0.18
HDAC6-214ENST00000465269 TMEM134Q9H6X4 195 aa16.19■□□□□ 0.18
HDAC6-214ENST00000465269 KMT5AQ9NQR1 393 aa16.19■□□□□ 0.18
HDAC6-214ENST00000465269 TCRBV21S2A2A0A5A6 115 aa16.18■□□□□ 0.18
HDAC6-214ENST00000465269 TTC26A0AVF1 554 aa16.18■□□□□ 0.18
HDAC6-214ENST00000465269 ADAM23O75077 832 aa16.18■□□□□ 0.18
HDAC6-214ENST00000465269 GJB3O75712 270 aa16.18■□□□□ 0.18
HDAC6-214ENST00000465269 CKMP06732 381 aa16.18■□□□□ 0.18
HDAC6-214ENST00000465269 XBP1P17861 261 aa16.18■□□□□ 0.18
HDAC6-214ENST00000465269 PSMA5P28066 241 aa16.18■□□□□ 0.18
HDAC6-214ENST00000465269 FAM160A1Q05DH4 1040 aa16.18■□□□□ 0.18
HDAC6-214ENST00000465269 MAPK7Q13164 816 aa16.18■□□□□ 0.18
HDAC6-214ENST00000465269 ZNF268Q14587 947 aaPredicted RBP16.18■□□□□ 0.18
HDAC6-214ENST00000465269 CENPQQ7L2Z9 268 aaPredicted RBP16.18■□□□□ 0.18
HDAC6-214ENST00000465269 SLC41A1Q8IVJ1 513 aa16.18■□□□□ 0.18
HDAC6-214ENST00000465269 ARL14EPQ8N8R7 260 aaPredicted RBP16.18■□□□□ 0.18
HDAC6-214ENST00000465269 SH3RF2Q8TEC5 729 aa16.18■□□□□ 0.18
HDAC6-214ENST00000465269 LRRC15Q8TF66 581 aa16.18■□□□□ 0.18
HDAC6-214ENST00000465269 EXOC4Q96A65 974 aa16.18■□□□□ 0.18
HDAC6-214ENST00000465269 DCBLD2Q96PD2 775 aa16.18■□□□□ 0.18
HDAC6-214ENST00000465269 PI4K2AQ9BTU6 479 aa16.18■□□□□ 0.18
HDAC6-214ENST00000465269 ZSWIM6Q9HCJ5 1215 aa16.18■□□□□ 0.18
HDAC6-214ENST00000465269 DNAAF2Q9NVR5 837 aaKnown RBP16.18■□□□□ 0.18
HDAC6-214ENST00000465269 HSFX1Q9UBD0 423 aa16.18■□□□□ 0.18
HDAC6-214ENST00000465269 ORC3Q9UBD5 711 aaPredicted RBP16.18■□□□□ 0.18
HDAC6-214ENST00000465269 UBQLN1Q9UMX0 589 aaKnown RBP16.18■□□□□ 0.18
HDAC6-214ENST00000465269 PTPRQQ9UMZ3 2332 aa16.18■□□□□ 0.18
HDAC6-214ENST00000465269 PIEZO2Q9H5I5 2752 aa16.17■□□□□ 0.18
HDAC6-214ENST00000465269 MYO18AQ92614 2054 aaKnown RBP16.17■□□□□ 0.18
HDAC6-214ENST00000465269 FAM149AA5PLN7 773 aa16.17■□□□□ 0.18
HDAC6-214ENST00000465269 C2orf78A6NCI8 922 aa16.17■□□□□ 0.18
HDAC6-214ENST00000465269 DDX6P26196 483 aaKnown RBP eCLIP16.17■□□□□ 0.18
HDAC6-214ENST00000465269 MATR3P43243 847 aaKnown RBP eCLIP16.17■□□□□ 0.18
HDAC6-214ENST00000465269 ZXDBP98169 803 aa16.17■□□□□ 0.18
HDAC6-214ENST00000465269 DDR2Q16832 855 aa16.17■□□□□ 0.18
HDAC6-214ENST00000465269 CCDC142Q17RM4 750 aa16.17■□□□□ 0.18
HDAC6-214ENST00000465269 TOGARAM2Q6ZUX3 1019 aa16.17■□□□□ 0.18
HDAC6-214ENST00000465269 C12orf40Q86WS4 652 aa16.17■□□□□ 0.18
HDAC6-214ENST00000465269 FAM212AQ96EL1 285 aa16.17■□□□□ 0.18
HDAC6-214ENST00000465269 RUSC1Q9BVN2 902 aa16.17■□□□□ 0.18
HDAC6-214ENST00000465269 POLMQ9NP87 494 aaPredicted RBP16.17■□□□□ 0.18
HDAC6-214ENST00000465269 KIAA1024Q9UPX6 916 aa16.17■□□□□ 0.18
HDAC6-214ENST00000465269 GTF3C3Q9Y5Q9 886 aa16.17■□□□□ 0.18
HDAC6-214ENST00000465269 SCN1AP35498 2009 aa16.17■□□□□ 0.18
HDAC6-214ENST00000465269 PLXND1Q9Y4D7 1925 aa16.17■□□□□ 0.18
HDAC6-214ENST00000465269 STK36Q9NRP7 1315 aa16.17■□□□□ 0.18
HDAC6-214ENST00000465269 COL12A1Q99715 3063 aa16.16■□□□□ 0.18
HDAC6-214ENST00000465269 KNL1Q8NG31 2342 aa16.16■□□□□ 0.18
HDAC6-214ENST00000465269 MYOFQ9NZM1 2061 aa16.16■□□□□ 0.18
HDAC6-214ENST00000465269 TRABD2BA6NFA1 517 aa16.16■□□□□ 0.18
HDAC6-214ENST00000465269 GOLGA8CPA6NN73 597 aa16.16■□□□□ 0.18
HDAC6-214ENST00000465269 PYCARD-AS1I3L0S3 204 aa16.16■□□□□ 0.18
HDAC6-214ENST00000465269 TOM1L1O75674 476 aa16.16■□□□□ 0.18
HDAC6-214ENST00000465269 FDPSP14324 419 aaKnown RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms