RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 TAP1Q03518 808 aa9.47□□□□□ -0.89
HPS4-208ENST00000464362 NSUN2Q08J23 767 aaKnown RBP eCLIP9.47□□□□□ -0.89
HPS4-208ENST00000464362 DACT2Q5SW24 774 aa9.47□□□□□ -0.89
HPS4-208ENST00000464362 ERMARDQ5T6L9 678 aa9.47□□□□□ -0.89
HPS4-208ENST00000464362 ACAD11Q709F0 780 aa9.47□□□□□ -0.89
HPS4-208ENST00000464362 EXOC3L1Q86VI1 746 aa9.47□□□□□ -0.89
HPS4-208ENST00000464362 POU5F2Q8N7G0 328 aa9.47□□□□□ -0.89
HPS4-208ENST00000464362 ICA1LQ8NDH6 482 aa9.47□□□□□ -0.89
HPS4-208ENST00000464362 AGAP11Q8TF27 550 aa9.47□□□□□ -0.89
HPS4-208ENST00000464362 MAGEB18Q96M61 343 aa9.47□□□□□ -0.89
HPS4-208ENST00000464362 FGD4Q96M96 766 aa9.47□□□□□ -0.89
HPS4-208ENST00000464362 MMP19Q99542 508 aa9.47□□□□□ -0.89
HPS4-208ENST00000464362 HSD17B14Q9BPX1 270 aa9.47□□□□□ -0.89
HPS4-208ENST00000464362 NT5C1AQ9BXI3 368 aa9.47□□□□□ -0.89
HPS4-208ENST00000464362 KDM4CQ9H3R0 1056 aa9.47□□□□□ -0.89
HPS4-208ENST00000464362 RSAD1Q9HA92 442 aa9.47□□□□□ -0.89
HPS4-208ENST00000464362 HACL1Q9UJ83 578 aa9.47□□□□□ -0.89
HPS4-208ENST00000464362 GAKO14976 1311 aa9.47□□□□□ -0.89
HPS4-208ENST00000464362 XRN1Q8IZH2 1706 aaKnown RBP9.47□□□□□ -0.89
HPS4-208ENST00000464362 RNF103-CHMP3A0A140T963 221 aa9.47□□□□□ -0.89
HPS4-208ENST00000464362 SNX3O60493 162 aa9.47□□□□□ -0.89
HPS4-208ENST00000464362 MYL3P08590 195 aa9.47□□□□□ -0.89
HPS4-208ENST00000464362 CTSHP09668 335 aa9.47□□□□□ -0.89
HPS4-208ENST00000464362 ATP6V1B1P15313 513 aa9.47□□□□□ -0.89
HPS4-208ENST00000464362 TNFAIP2Q03169 654 aa9.47□□□□□ -0.89
HPS4-208ENST00000464362 ITIH4Q14624 930 aa9.47□□□□□ -0.89
HPS4-208ENST00000464362 MORF4L2Q15014 288 aa9.47□□□□□ -0.89
HPS4-208ENST00000464362 FSCBQ5H9T9 825 aa9.47□□□□□ -0.89
HPS4-208ENST00000464362 DUPD1Q68J44 220 aa9.47□□□□□ -0.89
HPS4-208ENST00000464362 C4orf19Q8IY42 314 aa9.47□□□□□ -0.89
HPS4-208ENST00000464362 GMCL1P1Q8NEA9 526 aa9.47□□□□□ -0.89
HPS4-208ENST00000464362 FAM136AQ96C01 138 aa9.47□□□□□ -0.89
HPS4-208ENST00000464362 ZBTB10Q96DT7 871 aa9.47□□□□□ -0.89
HPS4-208ENST00000464362 PGM2Q96G03 612 aa9.47□□□□□ -0.89
HPS4-208ENST00000464362 HES6Q96HZ4 224 aa9.47□□□□□ -0.89
HPS4-208ENST00000464362 PCDHB18PQ96TA0 734 aa9.47□□□□□ -0.89
HPS4-208ENST00000464362 AJAP1Q9UKB5 411 aaPredicted RBP9.47□□□□□ -0.89
HPS4-208ENST00000464362 CACNA1FO60840 1977 aa9.47□□□□□ -0.89
HPS4-208ENST00000464362 GOLGA8QA0A0J9YX86 632 aa9.47□□□□□ -0.89
HPS4-208ENST00000464362 GOLGA8OA6NCC3 632 aa9.47□□□□□ -0.89
HPS4-208ENST00000464362 KPNA7A9QM74 516 aa9.47□□□□□ -0.89
HPS4-208ENST00000464362 GOLGA8NF8WBI6 632 aa9.47□□□□□ -0.89
HPS4-208ENST00000464362 OGTO15294 1046 aa9.47□□□□□ -0.89
HPS4-208ENST00000464362 MT-CO1P00395 513 aa9.47□□□□□ -0.89
HPS4-208ENST00000464362 GPD1P21695 349 aa9.47□□□□□ -0.89
HPS4-208ENST00000464362 PAX7P23759 505 aa9.47□□□□□ -0.89
HPS4-208ENST00000464362 GLRBP48167 497 aa9.47□□□□□ -0.89
HPS4-208ENST00000464362 SULT1E1P49888 294 aa9.47□□□□□ -0.89
HPS4-208ENST00000464362 CXCL9Q07325 125 aa9.47□□□□□ -0.89
HPS4-208ENST00000464362 PGM5Q15124 567 aa9.47□□□□□ -0.89
HPS4-208ENST00000464362 CNGA2Q16280 664 aa9.47□□□□□ -0.89
HPS4-208ENST00000464362 EML3Q32P44 896 aa9.47□□□□□ -0.89
HPS4-208ENST00000464362 HSP90AA5PQ58FG0 334 aa9.47□□□□□ -0.89
HPS4-208ENST00000464362 NETO2Q8NC67 525 aa9.47□□□□□ -0.89
HPS4-208ENST00000464362 CENPKQ9BS16 269 aa9.47□□□□□ -0.89
HPS4-208ENST00000464362 FHDC1Q9C0D6 1143 aaPredicted RBP9.47□□□□□ -0.89
HPS4-208ENST00000464362 PXMP2Q9NR77 195 aa9.47□□□□□ -0.89
HPS4-208ENST00000464362 MON2Q7Z3U7 1717 aa9.47□□□□□ -0.89
HPS4-208ENST00000464362 GNGT2O14610 69 aa9.46□□□□□ -0.89
HPS4-208ENST00000464362 SLC26A4O43511 780 aa9.46□□□□□ -0.89
HPS4-208ENST00000464362 PSTPIP1O43586 416 aa9.46□□□□□ -0.89
HPS4-208ENST00000464362 FSBPO95073 299 aa9.46□□□□□ -0.89
HPS4-208ENST00000464362 VIL1P09327 827 aaKnown RBP9.46□□□□□ -0.89
HPS4-208ENST00000464362 ABCG1P45844 678 aa9.46□□□□□ -0.89
HPS4-208ENST00000464362 AQP5P55064 265 aa9.46□□□□□ -0.89
HPS4-208ENST00000464362 RPL10AP62906 217 aaKnown RBP9.46□□□□□ -0.89
HPS4-208ENST00000464362 ELF3P78545 371 aaPredicted RBP9.46□□□□□ -0.89
HPS4-208ENST00000464362 RBP5P82980 135 aa9.46□□□□□ -0.89
HPS4-208ENST00000464362 FMO1Q01740 532 aa9.46□□□□□ -0.89
HPS4-208ENST00000464362 MXD4Q14582 209 aaPredicted RBP9.46□□□□□ -0.89
HPS4-208ENST00000464362 PCSK7Q16549 785 aa9.46□□□□□ -0.89
HPS4-208ENST00000464362 GOLGA7BQ2TAP0 167 aa9.46□□□□□ -0.89
HPS4-208ENST00000464362 CES3Q6UWW8 571 aa9.46□□□□□ -0.89
HPS4-208ENST00000464362 DENND5BQ6ZUT9 1274 aa9.46□□□□□ -0.89
HPS4-208ENST00000464362 ZNF677Q86XU0 584 aa9.46□□□□□ -0.89
HPS4-208ENST00000464362 EXD1Q8NHP7 514 aa9.46□□□□□ -0.89
HPS4-208ENST00000464362 KAT2BQ92831 832 aa9.46□□□□□ -0.89
HPS4-208ENST00000464362 ALKBH8Q96BT7 664 aaKnown RBP9.46□□□□□ -0.89
HPS4-208ENST00000464362 SH3GL2Q99962 352 aa9.46□□□□□ -0.89
HPS4-208ENST00000464362 EFHD1Q9BUP0 239 aa9.46□□□□□ -0.89
HPS4-208ENST00000464362 UBP1Q9NZI7 540 aa9.46□□□□□ -0.89
HPS4-208ENST00000464362 PAK5Q9P286 719 aa9.46□□□□□ -0.89
HPS4-208ENST00000464362 WDR35Q9P2L0 1181 aa9.46□□□□□ -0.89
HPS4-208ENST00000464362 STRCP1A6NGW2 1772 aa9.46□□□□□ -0.89
HPS4-208ENST00000464362 DYNC1LI2O43237 492 aaPredicted RBP9.46□□□□□ -0.89
HPS4-208ENST00000464362 TPST1O60507 370 aa9.46□□□□□ -0.89
HPS4-208ENST00000464362 VTNP04004 478 aa9.46□□□□□ -0.89
HPS4-208ENST00000464362 DRD4P21917 467 aa9.46□□□□□ -0.89
HPS4-208ENST00000464362 SERPINB3P29508 390 aa9.46□□□□□ -0.89
HPS4-208ENST00000464362 YWHAHQ04917 246 aaPredicted RBP9.46□□□□□ -0.89
HPS4-208ENST00000464362 CXorf38Q8TB03 319 aa9.46□□□□□ -0.89
HPS4-208ENST00000464362 RXFP2Q8WXD0 754 aa9.46□□□□□ -0.89
HPS4-208ENST00000464362 SEMA4DQ92854 862 aa9.46□□□□□ -0.89
HPS4-208ENST00000464362 CPB2Q96IY4 423 aa9.46□□□□□ -0.89
HPS4-208ENST00000464362 C12orf65Q9H3J6 166 aaKnown RBP9.46□□□□□ -0.89
HPS4-208ENST00000464362 TASP1Q9H6P5 420 aa9.46□□□□□ -0.89
HPS4-208ENST00000464362 SLC5A4Q9NY91 659 aa9.46□□□□□ -0.89
HPS4-208ENST00000464362 SLC39A10Q9ULF5 831 aa9.46□□□□□ -0.89
HPS4-208ENST00000464362 POLIQ9UNA4 740 aa9.46□□□□□ -0.89
HPS4-208ENST00000464362 COG5Q9UP83 839 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms