RNA–Protein interactions for RNA: ENST00000464279.5

SNX17-205, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 549 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-205ENST00000464279 RILPL1Q5EBL4 403 aa13.58□□□□□ -0.24
SNX17-205ENST00000464279 BRAPQ7Z569 592 aa13.58□□□□□ -0.24
SNX17-205ENST00000464279 SLFN12Q8IYM2 578 aa13.58□□□□□ -0.24
SNX17-205ENST00000464279 USP13Q92995 863 aaPredicted RBP13.58□□□□□ -0.24
SNX17-205ENST00000464279 SUSD3Q96L08 255 aa13.58□□□□□ -0.24
SNX17-205ENST00000464279 ZDHHC5Q9C0B5 715 aa13.58□□□□□ -0.24
SNX17-205ENST00000464279 SEMA4CQ9C0C4 833 aa13.58□□□□□ -0.24
SNX17-205ENST00000464279 TMEM60Q9H2L4 133 aa13.58□□□□□ -0.24
SNX17-205ENST00000464279 PRDM16Q9HAZ2 1276 aa13.58□□□□□ -0.24
SNX17-205ENST00000464279 SLC38A7Q9NVC3 462 aa13.58□□□□□ -0.24
SNX17-205ENST00000464279 NXF1Q9UBU9 619 aaKnown RBP13.58□□□□□ -0.24
SNX17-205ENST00000464279 SUSD2Q9UGT4 822 aa13.58□□□□□ -0.24
SNX17-205ENST00000464279 VAV3Q9UKW4 847 aa13.58□□□□□ -0.24
SNX17-205ENST00000464279 PCDHB6Q9Y5E3 794 aa13.58□□□□□ -0.24
SNX17-205ENST00000464279 MYO16Q9Y6X6 1858 aa13.58□□□□□ -0.24
SNX17-205ENST00000464279 PTPRDP23468 1912 aa13.58□□□□□ -0.24
SNX17-205ENST00000464279 SMIM28A0A1B0GU29 152 aa13.57□□□□□ -0.24
SNX17-205ENST00000464279 TTLL13PA6NNM8 815 aa13.57□□□□□ -0.24
SNX17-205ENST00000464279 BAG4O95429 457 aaKnown RBP13.57□□□□□ -0.24
SNX17-205ENST00000464279 MCM4P33991 863 aa13.57□□□□□ -0.24
SNX17-205ENST00000464279 SEMG2Q02383 582 aa13.57□□□□□ -0.24
SNX17-205ENST00000464279 GRIK2Q13002 908 aa13.57□□□□□ -0.24
SNX17-205ENST00000464279 PPP2R5CQ13362 524 aa13.57□□□□□ -0.24
SNX17-205ENST00000464279 FAM187BQ17R55 369 aa13.57□□□□□ -0.24
SNX17-205ENST00000464279 DCAF4L1Q3SXM0 396 aa13.57□□□□□ -0.24
SNX17-205ENST00000464279 PGBD3Q8N328 593 aa13.57□□□□□ -0.24
SNX17-205ENST00000464279 SNIP1Q8TAD8 396 aaKnown RBP13.57□□□□□ -0.24
SNX17-205ENST00000464279 DDX12PQ92771 950 aa13.57□□□□□ -0.24
SNX17-205ENST00000464279 ATP2A3Q93084 1043 aa13.57□□□□□ -0.24
SNX17-205ENST00000464279 MTMR9Q96QG7 549 aa13.57□□□□□ -0.24
SNX17-205ENST00000464279 POLR3FQ9H1D9 316 aaPredicted RBP13.57□□□□□ -0.24
SNX17-205ENST00000464279 FZD8Q9H461 694 aa13.57□□□□□ -0.24
SNX17-205ENST00000464279 FAM124BQ9H5Z6 455 aaPredicted RBP13.57□□□□□ -0.24
SNX17-205ENST00000464279 TDP1Q9NUW8 608 aa13.57□□□□□ -0.24
SNX17-205ENST00000464279 UBR5O95071 2799 aaPredicted RBP13.57□□□□□ -0.24
SNX17-205ENST00000464279 PLXND1Q9Y4D7 1925 aa13.56□□□□□ -0.24
SNX17-205ENST00000464279 MGAQ8IWI9 3026 aa13.56□□□□□ -0.24
SNX17-205ENST00000464279 ATMQ13315 3056 aa13.56□□□□□ -0.24
SNX17-205ENST00000464279 DOPEY2Q9Y3R5 2298 aa13.56□□□□□ -0.24
SNX17-205ENST00000464279 K7EQS6 105 aa13.56□□□□□ -0.24
SNX17-205ENST00000464279 DGAT1O75907 488 aa13.56□□□□□ -0.24
SNX17-205ENST00000464279 OR4Q2P0C623 313 aa13.56□□□□□ -0.24
SNX17-205ENST00000464279 PDIA4P13667 645 aaKnown RBP13.56□□□□□ -0.24
SNX17-205ENST00000464279 MRPS21P82921 87 aaKnown RBP13.56□□□□□ -0.24
SNX17-205ENST00000464279 TLE3Q04726 772 aa13.56□□□□□ -0.24
SNX17-205ENST00000464279 PRPF4BQ13523 1007 aaKnown RBP13.56□□□□□ -0.24
SNX17-205ENST00000464279 VEPH1Q14D04 833 aa13.56□□□□□ -0.24
SNX17-205ENST00000464279 PREPLQ4J6C6 727 aaPredicted RBP13.56□□□□□ -0.24
SNX17-205ENST00000464279 ZBTB8OSQ8IWT0 167 aa13.56□□□□□ -0.24
SNX17-205ENST00000464279 ALLCQ8N6M5 410 aa13.56□□□□□ -0.24
SNX17-205ENST00000464279 RIN3Q8TB24 985 aa13.56□□□□□ -0.24
SNX17-205ENST00000464279 HSPA12BQ96MM6 686 aa13.56□□□□□ -0.24
SNX17-205ENST00000464279 OXCT2Q9BYC2 517 aaPredicted RBP13.56□□□□□ -0.24
SNX17-205ENST00000464279 IL21Q9HBE4 155 aa13.56□□□□□ -0.24
SNX17-205ENST00000464279 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.56□□□□□ -0.24
SNX17-205ENST00000464279 IL17BQ9UHF5 180 aa13.56□□□□□ -0.24
SNX17-205ENST00000464279 SLC27A5Q9Y2P5 690 aa13.56□□□□□ -0.24
SNX17-205ENST00000464279 COL12A1Q99715 3063 aa13.55□□□□□ -0.24
SNX17-205ENST00000464279 TCRBV21S2A2A0A5A6 115 aa13.55□□□□□ -0.24
SNX17-205ENST00000464279 ZBTB39O15060 712 aa13.55□□□□□ -0.24
SNX17-205ENST00000464279 SOAT2O75908 522 aa13.55□□□□□ -0.24
SNX17-205ENST00000464279 KLF8O95600 359 aaPredicted RBP13.55□□□□□ -0.24
SNX17-205ENST00000464279 OR52Z1P0C646 297 aa13.55□□□□□ -0.24
SNX17-205ENST00000464279 ZNF883P0CG24 379 aa13.55□□□□□ -0.24
SNX17-205ENST00000464279 GNSP15586 552 aa13.55□□□□□ -0.24
SNX17-205ENST00000464279 MARCKSP29966 332 aaPredicted RBP13.55□□□□□ -0.24
SNX17-205ENST00000464279 IFNAR2P48551 515 aa13.55□□□□□ -0.24
SNX17-205ENST00000464279 NR1H3Q13133 447 aa13.55□□□□□ -0.24
SNX17-205ENST00000464279 GPR17Q13304 367 aa13.55□□□□□ -0.24
SNX17-205ENST00000464279 MTF1Q14872 753 aa13.55□□□□□ -0.24
SNX17-205ENST00000464279 HSF5Q4G112 596 aaPredicted RBP13.55□□□□□ -0.24
SNX17-205ENST00000464279 C6orf118Q5T5N4 469 aa13.55□□□□□ -0.24
SNX17-205ENST00000464279 CDCA2Q69YH5 1023 aaPredicted RBP13.55□□□□□ -0.24
SNX17-205ENST00000464279 CENPPQ6IPU0 288 aa13.55□□□□□ -0.24
SNX17-205ENST00000464279 PRICKLE2Q7Z3G6 844 aa13.55□□□□□ -0.24
SNX17-205ENST00000464279 SLC41A1Q8IVJ1 513 aa13.55□□□□□ -0.24
SNX17-205ENST00000464279 RGL4Q8IZJ4 473 aa13.55□□□□□ -0.24
SNX17-205ENST00000464279 C4orf32Q8N8J7 132 aa13.55□□□□□ -0.24
SNX17-205ENST00000464279 MAB21L3Q8N8X9 362 aa13.55□□□□□ -0.24
SNX17-205ENST00000464279 TRIML1Q8N9V2 468 aa13.55□□□□□ -0.24
SNX17-205ENST00000464279 TXNDC5Q8NBS9 432 aaKnown RBP13.55□□□□□ -0.24
SNX17-205ENST00000464279 OSCP1Q8WVF1 389 aa13.55□□□□□ -0.24
SNX17-205ENST00000464279 ZSCAN16Q9H4T2 348 aaPredicted RBP13.55□□□□□ -0.24
SNX17-205ENST00000464279 ZSWIM4Q9H7M6 989 aa13.55□□□□□ -0.24
SNX17-205ENST00000464279 TTC12Q9H892 705 aaPredicted RBP13.55□□□□□ -0.24
SNX17-205ENST00000464279 DUS2Q9NX74 493 aaKnown RBP13.55□□□□□ -0.24
SNX17-205ENST00000464279 PCDHB8Q9UN66 801 aa13.55□□□□□ -0.24
SNX17-205ENST00000464279 PCDHA12Q9UN75 941 aa13.55□□□□□ -0.24
SNX17-205ENST00000464279 MTMR11A4FU01 709 aa13.54□□□□□ -0.24
SNX17-205ENST00000464279 ANTXRLA6NF34 631 aa13.54□□□□□ -0.24
SNX17-205ENST00000464279 SGK1O00141 431 aa13.54□□□□□ -0.24
SNX17-205ENST00000464279 FLRT2O43155 660 aa13.54□□□□□ -0.24
SNX17-205ENST00000464279 ZSCAN22P10073 491 aaPredicted RBP13.54□□□□□ -0.24
SNX17-205ENST00000464279 DDX6P26196 483 aaKnown RBP eCLIP13.54□□□□□ -0.24
SNX17-205ENST00000464279 RPL9P32969 192 aaKnown RBP13.54□□□□□ -0.24
SNX17-205ENST00000464279 TXKP42681 527 aa13.54□□□□□ -0.24
SNX17-205ENST00000464279 YWHAHQ04917 246 aaPredicted RBP13.54□□□□□ -0.24
SNX17-205ENST00000464279 PKP1Q13835 747 aa13.54□□□□□ -0.24
SNX17-205ENST00000464279 LY6DQ14210 128 aa13.54□□□□□ -0.24
SNX17-205ENST00000464279 EOGTQ5NDL2 527 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms