RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 TRPV2Q9Y5S1 764 aa22.92■■□□□ 1.26
PDLIM2-216ENST00000464275 PIRO00625 290 aa22.92■■□□□ 1.26
PDLIM2-216ENST00000464275 ECEL1O95672 775 aa22.92■■□□□ 1.26
PDLIM2-216ENST00000464275 RARBP10826 455 aa22.92■■□□□ 1.26
PDLIM2-216ENST00000464275 RFC1P35251 1148 aaPredicted RBP22.92■■□□□ 1.26
PDLIM2-216ENST00000464275 LLGL1Q15334 1064 aa22.92■■□□□ 1.26
PDLIM2-216ENST00000464275 CXCL17Q6UXB2 119 aa22.92■■□□□ 1.26
PDLIM2-216ENST00000464275 PAXIP1Q6ZW49 1069 aaPredicted RBP22.92■■□□□ 1.26
PDLIM2-216ENST00000464275 RSPH3Q86UC2 560 aa22.92■■□□□ 1.26
PDLIM2-216ENST00000464275 FAM228AQ86W67 206 aa22.92■■□□□ 1.26
PDLIM2-216ENST00000464275 UNC93AQ86WB7 457 aa22.92■■□□□ 1.26
PDLIM2-216ENST00000464275 ARFGAP2Q8N6H7 521 aa22.92■■□□□ 1.26
PDLIM2-216ENST00000464275 IPO4Q8TEX9 1081 aaKnown RBP22.92■■□□□ 1.26
PDLIM2-216ENST00000464275 ATP6V1G3Q96LB4 118 aa22.92■■□□□ 1.26
PDLIM2-216ENST00000464275 ZNF560Q96MR9 790 aa22.92■■□□□ 1.26
PDLIM2-216ENST00000464275 FMO2Q99518 471 aa22.92■■□□□ 1.26
PDLIM2-216ENST00000464275 EBAG9O00559 213 aa22.91■■□□□ 1.26
PDLIM2-216ENST00000464275 PGK1P00558 417 aa22.91■■□□□ 1.26
PDLIM2-216ENST00000464275 CYP3A5P20815 502 aa22.91■■□□□ 1.26
PDLIM2-216ENST00000464275 PSMA2P25787 234 aa22.91■■□□□ 1.26
PDLIM2-216ENST00000464275 MAGEA9P43362 315 aa22.91■■□□□ 1.26
PDLIM2-216ENST00000464275 KCNJ1P48048 391 aa22.91■■□□□ 1.26
PDLIM2-216ENST00000464275 COPS2P61201 443 aa22.91■■□□□ 1.26
PDLIM2-216ENST00000464275 FOXR1Q6PIV2 292 aa22.91■■□□□ 1.26
PDLIM2-216ENST00000464275 SYDE1Q6ZW31 735 aaPredicted RBP22.91■■□□□ 1.26
PDLIM2-216ENST00000464275 DPH6Q7L8W6 267 aa22.91■■□□□ 1.26
PDLIM2-216ENST00000464275 SMC1BQ8NDV3 1235 aa22.91■■□□□ 1.26
PDLIM2-216ENST00000464275 JOSD2Q8TAC2 188 aa22.91■■□□□ 1.26
PDLIM2-216ENST00000464275 UBA3Q8TBC4 463 aa22.91■■□□□ 1.26
PDLIM2-216ENST00000464275 GRK7Q8WTQ7 553 aa22.91■■□□□ 1.26
PDLIM2-216ENST00000464275 KLK14Q9P0G3 267 aa22.91■■□□□ 1.26
PDLIM2-216ENST00000464275 TSPAN16Q9UKR8 245 aa22.91■■□□□ 1.26
PDLIM2-216ENST00000464275 CDY2AQ9Y6F7 541 aa22.91■■□□□ 1.26
PDLIM2-216ENST00000464275 KRT1P04264 644 aa22.9■■□□□ 1.26
PDLIM2-216ENST00000464275 HSD17B3P37058 310 aa22.9■■□□□ 1.26
PDLIM2-216ENST00000464275 PNPLA4P41247 253 aa22.9■■□□□ 1.26
PDLIM2-216ENST00000464275 SMG8Q8ND04 991 aaKnown RBP22.9■■□□□ 1.26
PDLIM2-216ENST00000464275 RNF39Q9H2S5 420 aa22.9■■□□□ 1.26
PDLIM2-216ENST00000464275 METTL5Q9NRN9 209 aaKnown RBP22.9■■□□□ 1.26
PDLIM2-216ENST00000464275 CHST7Q9NS84 486 aa22.9■■□□□ 1.26
PDLIM2-216ENST00000464275 ATXN2Q99700 1313 aaKnown RBP22.9■■□□□ 1.26
PDLIM2-216ENST00000464275 TCF4P15884 667 aa22.9■■□□□ 1.26
PDLIM2-216ENST00000464275 FLT3P36888 993 aa22.9■■□□□ 1.26
PDLIM2-216ENST00000464275 RPL21P46778 160 aaKnown RBP22.9■■□□□ 1.26
PDLIM2-216ENST00000464275 NFX1Q12986 1120 aaKnown RBP22.9■■□□□ 1.26
PDLIM2-216ENST00000464275 KCTD19Q17RG1 926 aaPredicted RBP22.9■■□□□ 1.26
PDLIM2-216ENST00000464275 FBXO47Q5MNV8 452 aa22.9■■□□□ 1.26
PDLIM2-216ENST00000464275 TWF2Q6IBS0 349 aaKnown RBP22.9■■□□□ 1.26
PDLIM2-216ENST00000464275 GDF6Q6KF10 455 aaPredicted RBP22.9■■□□□ 1.26
PDLIM2-216ENST00000464275 TMC3Q7Z5M5 1100 aa22.9■■□□□ 1.26
PDLIM2-216ENST00000464275 POLNQ7Z5Q5 900 aa22.9■■□□□ 1.26
PDLIM2-216ENST00000464275 RNF25Q96BH1 459 aaPredicted RBP22.9■■□□□ 1.26
PDLIM2-216ENST00000464275 SLITRK1Q96PX8 696 aa22.9■■□□□ 1.26
PDLIM2-216ENST00000464275 HEMGNQ9BXL5 484 aa22.9■■□□□ 1.26
PDLIM2-216ENST00000464275 FAM129AQ9BZQ8 928 aa22.9■■□□□ 1.26
PDLIM2-216ENST00000464275 GRHL1Q9NZI5 618 aa22.9■■□□□ 1.26
PDLIM2-216ENST00000464275 KRT14P02533 472 aa22.89■■□□□ 1.26
PDLIM2-216ENST00000464275 RPLP2P05387 115 aaKnown RBP22.89■■□□□ 1.26
PDLIM2-216ENST00000464275 PTPN7P35236 360 aa22.89■■□□□ 1.26
PDLIM2-216ENST00000464275 PRKCZQ05513 592 aa22.89■■□□□ 1.26
PDLIM2-216ENST00000464275 SNX1Q13596 522 aa22.89■■□□□ 1.26
PDLIM2-216ENST00000464275 PPP1R7Q15435 360 aa22.89■■□□□ 1.26
PDLIM2-216ENST00000464275 CCNG2Q16589 344 aa22.89■■□□□ 1.26
PDLIM2-216ENST00000464275 GOLGA7BQ2TAP0 167 aa22.89■■□□□ 1.26
PDLIM2-216ENST00000464275 ATP13A4Q4VNC1 1196 aa22.89■■□□□ 1.26
PDLIM2-216ENST00000464275 ZFYVE27Q5T4F4 411 aa22.89■■□□□ 1.26
PDLIM2-216ENST00000464275 CYP4F22Q6NT55 531 aa22.89■■□□□ 1.26
PDLIM2-216ENST00000464275 BCAS4Q8TDM0 211 aa22.89■■□□□ 1.26
PDLIM2-216ENST00000464275 PTPN22Q9Y2R2 807 aa22.89■■□□□ 1.26
PDLIM2-216ENST00000464275 SETSIPP0DME0 302 aa22.89■■□□□ 1.25
PDLIM2-216ENST00000464275 NR1D1P20393 614 aa22.89■■□□□ 1.25
PDLIM2-216ENST00000464275 CACNB2Q08289 660 aaPredicted RBP22.89■■□□□ 1.25
PDLIM2-216ENST00000464275 ACAP1Q15027 740 aa22.89■■□□□ 1.25
PDLIM2-216ENST00000464275 ODF2Q5BJF6 829 aa22.89■■□□□ 1.25
PDLIM2-216ENST00000464275 ZDHHC24Q6UX98 284 aa22.89■■□□□ 1.25
PDLIM2-216ENST00000464275 ACOT1Q86TX2 421 aa22.89■■□□□ 1.25
PDLIM2-216ENST00000464275 ATL2Q8NHH9 583 aa22.89■■□□□ 1.25
PDLIM2-216ENST00000464275 GDAP2Q9NXN4 497 aa22.89■■□□□ 1.25
PDLIM2-216ENST00000464275 PLAAQ9Y263 795 aa22.89■■□□□ 1.25
PDLIM2-216ENST00000464275 PPFIA2O75334 1257 aa22.88■■□□□ 1.25
PDLIM2-216ENST00000464275 PFKMP08237 780 aa22.88■■□□□ 1.25
PDLIM2-216ENST00000464275 PLTPP55058 493 aa22.88■■□□□ 1.25
PDLIM2-216ENST00000464275 DHX9Q08211 1270 aaKnown RBP22.88■■□□□ 1.25
PDLIM2-216ENST00000464275 UAP1Q16222 522 aaPredicted RBP22.88■■□□□ 1.25
PDLIM2-216ENST00000464275 HADHQ16836 314 aaKnown RBP22.88■■□□□ 1.25
PDLIM2-216ENST00000464275 SOWAHAQ2M3V2 549 aa22.88■■□□□ 1.25
PDLIM2-216ENST00000464275 PPP1R26Q5T8A7 1209 aaPredicted RBP22.88■■□□□ 1.25
PDLIM2-216ENST00000464275 SPOCD1Q6ZMY3 1216 aa22.88■■□□□ 1.25
PDLIM2-216ENST00000464275 B4GALNT4Q76KP1 1039 aa22.88■■□□□ 1.25
PDLIM2-216ENST00000464275 C12orf29Q8N999 325 aa22.88■■□□□ 1.25
PDLIM2-216ENST00000464275 OR6B3Q8NGW1 331 aa22.88■■□□□ 1.25
PDLIM2-216ENST00000464275 RNF19AQ9NV58 838 aa22.88■■□□□ 1.25
PDLIM2-216ENST00000464275 KPNA7A9QM74 516 aa22.87■■□□□ 1.25
PDLIM2-216ENST00000464275 ADAMTS4O75173 837 aa22.87■■□□□ 1.25
PDLIM2-216ENST00000464275 TAF6P49848 677 aa22.87■■□□□ 1.25
PDLIM2-216ENST00000464275 KRT17Q04695 432 aa22.87■■□□□ 1.25
PDLIM2-216ENST00000464275 TRIM32Q13049 653 aa22.87■■□□□ 1.25
PDLIM2-216ENST00000464275 SV2CQ496J9 727 aa22.87■■□□□ 1.25
PDLIM2-216ENST00000464275 ANKS1BQ7Z6G8 1248 aa22.87■■□□□ 1.25
PDLIM2-216ENST00000464275 PPM1EQ8WY54 764 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms