RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 CEP72Q9P209 647 aa20.17■□□□□ 0.82
LMNB1-204ENST00000463908 YIPF1Q9Y548 306 aa20.17■□□□□ 0.82
LMNB1-204ENST00000463908 BRWD1Q9NSI6 2320 aa20.16■□□□□ 0.82
LMNB1-204ENST00000463908 RNF225M0QZC1 329 aaPredicted RBP20.16■□□□□ 0.82
LMNB1-204ENST00000463908 PES1O00541 588 aaKnown RBP20.16■□□□□ 0.82
LMNB1-204ENST00000463908 IL9P15248 144 aa20.16■□□□□ 0.82
LMNB1-204ENST00000463908 TUFMP49411 452 aaKnown RBP20.16■□□□□ 0.82
LMNB1-204ENST00000463908 CYP27A1Q02318 531 aa20.16■□□□□ 0.82
LMNB1-204ENST00000463908 MAPRE1Q15691 268 aaKnown RBP20.16■□□□□ 0.82
LMNB1-204ENST00000463908 ATAT1Q5SQI0 421 aa20.16■□□□□ 0.82
LMNB1-204ENST00000463908 CES5AQ6NT32 575 aa20.16■□□□□ 0.82
LMNB1-204ENST00000463908 SPATA2LQ8IUW3 424 aaPredicted RBP20.16■□□□□ 0.82
LMNB1-204ENST00000463908 TTC39CQ8N584 583 aa20.16■□□□□ 0.82
LMNB1-204ENST00000463908 SMG7Q92540 1137 aaKnown RBP20.16■□□□□ 0.82
LMNB1-204ENST00000463908 ABCB6Q9NP58 842 aa20.16■□□□□ 0.82
LMNB1-204ENST00000463908 DNMT3BQ9UBC3 853 aaKnown RBP20.16■□□□□ 0.82
LMNB1-204ENST00000463908 AJAP1Q9UKB5 411 aaPredicted RBP20.16■□□□□ 0.82
LMNB1-204ENST00000463908 LGALS16A8MUM7 142 aa20.15■□□□□ 0.82
LMNB1-204ENST00000463908 CLDN5O00501 218 aa20.15■□□□□ 0.82
LMNB1-204ENST00000463908 POU2F2P09086 479 aa20.15■□□□□ 0.82
LMNB1-204ENST00000463908 ATF6P18850 670 aa20.15■□□□□ 0.82
LMNB1-204ENST00000463908 BDNFP23560 247 aa20.15■□□□□ 0.82
LMNB1-204ENST00000463908 GPR15P49685 360 aa20.15■□□□□ 0.82
LMNB1-204ENST00000463908 KLK7P49862 253 aa20.15■□□□□ 0.82
LMNB1-204ENST00000463908 SMAD2Q15796 467 aaKnown RBP20.15■□□□□ 0.82
LMNB1-204ENST00000463908 AAK1Q2M2I8 961 aa20.15■□□□□ 0.82
LMNB1-204ENST00000463908 PUS10Q3MIT2 529 aaKnown RBP20.15■□□□□ 0.82
LMNB1-204ENST00000463908 MGAT5BQ3V5L5 792 aa20.15■□□□□ 0.82
LMNB1-204ENST00000463908 CYP26C1Q6V0L0 522 aa20.15■□□□□ 0.82
LMNB1-204ENST00000463908 C4orf50Q6ZRC1 276 aa20.15■□□□□ 0.82
LMNB1-204ENST00000463908 FUKQ8N0W3 1084 aa20.15■□□□□ 0.82
LMNB1-204ENST00000463908 ANKRD20A12PQ8NF67 263 aa20.15■□□□□ 0.82
LMNB1-204ENST00000463908 TMEM176AQ96HP8 235 aa20.15■□□□□ 0.82
LMNB1-204ENST00000463908 FUBP3Q96I24 572 aaKnown RBP eCLIP20.15■□□□□ 0.82
LMNB1-204ENST00000463908 NAP1L5Q96NT1 182 aaPredicted RBP20.15■□□□□ 0.82
LMNB1-204ENST00000463908 SEPT5Q99719 369 aaPredicted RBP20.15■□□□□ 0.82
LMNB1-204ENST00000463908 ZNF518BQ9C0D4 1074 aa20.15■□□□□ 0.82
LMNB1-204ENST00000463908 TMEM30AQ9NV96 361 aa20.15■□□□□ 0.82
LMNB1-204ENST00000463908 HCFC1R1Q9NWW0 138 aa20.15■□□□□ 0.82
LMNB1-204ENST00000463908 APEX2Q9UBZ4 518 aa20.15■□□□□ 0.82
LMNB1-204ENST00000463908 TEX33O43247 280 aa20.14■□□□□ 0.81
LMNB1-204ENST00000463908 LRG1P02750 347 aa20.14■□□□□ 0.81
LMNB1-204ENST00000463908 MAGEA11P43364 429 aa20.14■□□□□ 0.81
LMNB1-204ENST00000463908 ALDH1A3P47895 512 aa20.14■□□□□ 0.81
LMNB1-204ENST00000463908 CACNA2D1P54289 1103 aa20.14■□□□□ 0.81
LMNB1-204ENST00000463908 NTHL1P78549 312 aa20.14■□□□□ 0.81
LMNB1-204ENST00000463908 DDR2Q16832 855 aa20.14■□□□□ 0.81
LMNB1-204ENST00000463908 KLHDC7AQ5VTJ3 777 aa20.14■□□□□ 0.81
LMNB1-204ENST00000463908 SDHAF4Q5VUM1 108 aa20.14■□□□□ 0.81
LMNB1-204ENST00000463908 GRASPQ7Z6J2 395 aaPredicted RBP20.14■□□□□ 0.81
LMNB1-204ENST00000463908 GPR152Q8TDT2 470 aa20.14■□□□□ 0.81
LMNB1-204ENST00000463908 POMKQ9H5K3 350 aa20.14■□□□□ 0.81
LMNB1-204ENST00000463908 RTN4Q9NQC3 1192 aaKnown RBP20.14■□□□□ 0.81
LMNB1-204ENST00000463908 RAPGEFL1Q9UHV5 662 aa20.14■□□□□ 0.81
LMNB1-204ENST00000463908 CNTN6Q9UQ52 1028 aa20.14■□□□□ 0.81
LMNB1-204ENST00000463908 NOL4O94818 638 aa20.13■□□□□ 0.81
LMNB1-204ENST00000463908 TPM2P07951 284 aa20.13■□□□□ 0.81
LMNB1-204ENST00000463908 CCDC130P13994 396 aa20.13■□□□□ 0.81
LMNB1-204ENST00000463908 MTHFRP42898 656 aa20.13■□□□□ 0.81
LMNB1-204ENST00000463908 YWHAEP62258 255 aaKnown RBP20.13■□□□□ 0.81
LMNB1-204ENST00000463908 UBXN1Q04323 297 aa20.13■□□□□ 0.81
LMNB1-204ENST00000463908 CBX2Q14781 532 aaPredicted RBP20.13■□□□□ 0.81
LMNB1-204ENST00000463908 TMEM270Q6UE05 265 aa20.13■□□□□ 0.81
LMNB1-204ENST00000463908 DNAJB7Q7Z6W7 309 aaPredicted RBP20.13■□□□□ 0.81
LMNB1-204ENST00000463908 SLC2A14Q8TDB8 520 aa20.13■□□□□ 0.81
LMNB1-204ENST00000463908 GIPC2Q8TF65 315 aa20.13■□□□□ 0.81
LMNB1-204ENST00000463908 JAKMIP2Q96AA8 810 aa20.13■□□□□ 0.81
LMNB1-204ENST00000463908 CYFIP2Q96F07 1278 aa20.13■□□□□ 0.81
LMNB1-204ENST00000463908 HEXIM2Q96MH2 286 aaKnown RBP20.13■□□□□ 0.81
LMNB1-204ENST00000463908 RIPOR3Q96MK2 946 aa20.13■□□□□ 0.81
LMNB1-204ENST00000463908 HNRNPABQ99729 332 aaKnown RBP20.13■□□□□ 0.81
LMNB1-204ENST00000463908 LRRC3Q9BY71 257 aa20.13■□□□□ 0.81
LMNB1-204ENST00000463908 PIDD1Q9HB75 910 aa20.13■□□□□ 0.81
LMNB1-204ENST00000463908 WDR6Q9NNW5 1121 aaKnown RBP20.13■□□□□ 0.81
LMNB1-204ENST00000463908 FAM49BQ9NUQ9 324 aa20.13■□□□□ 0.81
LMNB1-204ENST00000463908 DNAJC12Q9UKB3 198 aa20.13■□□□□ 0.81
LMNB1-204ENST00000463908 SIK3Q9Y2K2 1263 aa20.13■□□□□ 0.81
LMNB1-204ENST00000463908 PCDHB4Q9Y5E5 795 aa20.13■□□□□ 0.81
LMNB1-204ENST00000463908 XYLBO75191 536 aa20.12■□□□□ 0.81
LMNB1-204ENST00000463908 CALCAP01258 141 aa20.12■□□□□ 0.81
LMNB1-204ENST00000463908 PTPN2P17706 415 aa20.12■□□□□ 0.81
LMNB1-204ENST00000463908 ZNF132P52740 706 aa20.12■□□□□ 0.81
LMNB1-204ENST00000463908 EPHB3P54753 998 aa20.12■□□□□ 0.81
LMNB1-204ENST00000463908 FKBP15Q5T1M5 1219 aa20.12■□□□□ 0.81
LMNB1-204ENST00000463908 IQCEQ6IPM2 695 aa20.12■□□□□ 0.81
LMNB1-204ENST00000463908 VSTM1Q6UX27 236 aa20.12■□□□□ 0.81
LMNB1-204ENST00000463908 HS6ST3Q8IZP7 471 aa20.12■□□□□ 0.81
LMNB1-204ENST00000463908 ZNF512Q96ME7 567 aaPredicted RBP20.12■□□□□ 0.81
LMNB1-204ENST00000463908 LSM14BQ9BX40 385 aaKnown RBP20.12■□□□□ 0.81
LMNB1-204ENST00000463908 NAA15Q9BXJ9 866 aaKnown RBP20.12■□□□□ 0.81
LMNB1-204ENST00000463908 PLCB1Q9NQ66 1216 aa20.12■□□□□ 0.81
LMNB1-204ENST00000463908 A0A1B0GTH6 734 aa20.11■□□□□ 0.81
LMNB1-204ENST00000463908 NRG2O14511 850 aaPredicted RBP20.11■□□□□ 0.81
LMNB1-204ENST00000463908 BEST1O76090 585 aa20.11■□□□□ 0.81
LMNB1-204ENST00000463908 GRIK1P39086 918 aa20.11■□□□□ 0.81
LMNB1-204ENST00000463908 MFAP3P55082 362 aa20.11■□□□□ 0.81
LMNB1-204ENST00000463908 PLD1Q13393 1074 aa20.11■□□□□ 0.81
LMNB1-204ENST00000463908 NR1I3Q14994 352 aa20.11■□□□□ 0.81
LMNB1-204ENST00000463908 SYCP1Q15431 976 aa20.11■□□□□ 0.81
LMNB1-204ENST00000463908 PTPN21Q16825 1174 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms