RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 TTC30AQ86WT1 665 aa13.52□□□□□ -0.24
VAPB-203ENST00000463370 NIPA2Q8N8Q9 360 aa13.52□□□□□ -0.24
VAPB-203ENST00000463370 RAB6CQ9H0N0 254 aa13.52□□□□□ -0.24
VAPB-203ENST00000463370 RASAL2Q9UJF2 1139 aa13.52□□□□□ -0.24
VAPB-203ENST00000463370 NFS1Q9Y697 457 aa13.52□□□□□ -0.24
VAPB-203ENST00000463370 CDY2AQ9Y6F7 541 aa13.52□□□□□ -0.24
VAPB-203ENST00000463370 E5RJQ4 531 aa13.52□□□□□ -0.25
VAPB-203ENST00000463370 ECEL1O95672 775 aa13.52□□□□□ -0.25
VAPB-203ENST00000463370 ELNP15502 786 aa13.52□□□□□ -0.25
VAPB-203ENST00000463370 LMO2P25791 158 aa13.52□□□□□ -0.25
VAPB-203ENST00000463370 GABRB2P47870 512 aa13.52□□□□□ -0.25
VAPB-203ENST00000463370 CDR1P51861 262 aa13.52□□□□□ -0.25
VAPB-203ENST00000463370 DRG2P55039 364 aaKnown RBP13.52□□□□□ -0.25
VAPB-203ENST00000463370 SLC25A11Q02978 314 aaKnown RBP13.52□□□□□ -0.25
VAPB-203ENST00000463370 DMTNQ08495 405 aa13.52□□□□□ -0.25
VAPB-203ENST00000463370 PIGHQ14442 188 aaPredicted RBP13.52□□□□□ -0.25
VAPB-203ENST00000463370 XKR4Q5GH76 650 aa13.52□□□□□ -0.25
VAPB-203ENST00000463370 FAM47CQ5HY64 1035 aa13.52□□□□□ -0.25
VAPB-203ENST00000463370 ZFYVE27Q5T4F4 411 aa13.52□□□□□ -0.25
VAPB-203ENST00000463370 SH3PXD2AQ5TCZ1 1133 aa13.52□□□□□ -0.25
VAPB-203ENST00000463370 MFSD14CQ5VZR4 134 aa13.52□□□□□ -0.25
VAPB-203ENST00000463370 TRNP1Q6NT89 227 aa13.52□□□□□ -0.25
VAPB-203ENST00000463370 PRUNE1Q86TP1 453 aa13.52□□□□□ -0.25
VAPB-203ENST00000463370 NME8Q8N427 588 aa13.52□□□□□ -0.25
VAPB-203ENST00000463370 SH2D3CQ8N5H7 860 aa13.52□□□□□ -0.25
VAPB-203ENST00000463370 LRRC52Q8N7C0 313 aa13.52□□□□□ -0.25
VAPB-203ENST00000463370 KBTBD7Q8WVZ9 684 aa13.52□□□□□ -0.25
VAPB-203ENST00000463370 TXLNGYQ9BZA5 131 aa13.52□□□□□ -0.25
VAPB-203ENST00000463370 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.52□□□□□ -0.25
VAPB-203ENST00000463370 UBQLN1Q9UMX0 589 aaKnown RBP13.52□□□□□ -0.25
VAPB-203ENST00000463370 ATP8A1Q9Y2Q0 1164 aa13.52□□□□□ -0.25
VAPB-203ENST00000463370 SCN1AP35498 2009 aa13.51□□□□□ -0.25
VAPB-203ENST00000463370 PODXLO00592 558 aa13.51□□□□□ -0.25
VAPB-203ENST00000463370 PTGESO14684 152 aa13.51□□□□□ -0.25
VAPB-203ENST00000463370 ADAMTS4O75173 837 aa13.51□□□□□ -0.25
VAPB-203ENST00000463370 GABBR2O75899 941 aa13.51□□□□□ -0.25
VAPB-203ENST00000463370 CHRNA1P02708 482 aa13.51□□□□□ -0.25
VAPB-203ENST00000463370 MRPS6P82932 125 aaKnown RBP13.51□□□□□ -0.25
VAPB-203ENST00000463370 TAP1Q03518 808 aa13.51□□□□□ -0.25
VAPB-203ENST00000463370 KRT17Q04695 432 aa13.51□□□□□ -0.25
VAPB-203ENST00000463370 CCDC142Q17RM4 750 aa13.51□□□□□ -0.25
VAPB-203ENST00000463370 KCTD16Q68DU8 428 aa13.51□□□□□ -0.25
VAPB-203ENST00000463370 PMF1Q6P1K2 205 aa13.51□□□□□ -0.25
VAPB-203ENST00000463370 TAF2Q6P1X5 1199 aa13.51□□□□□ -0.25
VAPB-203ENST00000463370 MCRS1Q96EZ8 462 aa13.51□□□□□ -0.25
VAPB-203ENST00000463370 RUFY1Q96T51 708 aa13.51□□□□□ -0.25
VAPB-203ENST00000463370 ZWILCHQ9H900 591 aa13.51□□□□□ -0.25
VAPB-203ENST00000463370 TMEM88BA6NKF7 163 aa13.51□□□□□ -0.25
VAPB-203ENST00000463370 CITO14578 2027 aa13.51□□□□□ -0.25
VAPB-203ENST00000463370 SEPT4O43236 478 aa13.51□□□□□ -0.25
VAPB-203ENST00000463370 GRAP2O75791 330 aa13.51□□□□□ -0.25
VAPB-203ENST00000463370 PDGFRBP09619 1106 aa13.51□□□□□ -0.25
VAPB-203ENST00000463370 KCNE1P15382 129 aa13.51□□□□□ -0.25
VAPB-203ENST00000463370 ATF7P17544 494 aaPredicted RBP13.51□□□□□ -0.25
VAPB-203ENST00000463370 GSCP56915 257 aaPredicted RBP13.51□□□□□ -0.25
VAPB-203ENST00000463370 ZNF268Q14587 947 aaPredicted RBP13.51□□□□□ -0.25
VAPB-203ENST00000463370 TAF5Q15542 800 aa13.51□□□□□ -0.25
VAPB-203ENST00000463370 PKDCCQ504Y2 493 aa13.51□□□□□ -0.25
VAPB-203ENST00000463370 FBXO47Q5MNV8 452 aa13.51□□□□□ -0.25
VAPB-203ENST00000463370 FAM102AQ5T9C2 384 aaPredicted RBP13.51□□□□□ -0.25
VAPB-203ENST00000463370 SMYD5Q6GMV2 418 aa13.51□□□□□ -0.25
VAPB-203ENST00000463370 FAM183BPQ6ZVS7 135 aa13.51□□□□□ -0.25
VAPB-203ENST00000463370 OR6B3Q8NGW1 331 aa13.51□□□□□ -0.25
VAPB-203ENST00000463370 UBLCP1Q8WVY7 318 aaPredicted RBP13.51□□□□□ -0.25
VAPB-203ENST00000463370 UPF3AQ9H1J1 476 aaKnown RBP13.51□□□□□ -0.25
VAPB-203ENST00000463370 EPB41L4BQ9H329 900 aa13.51□□□□□ -0.25
VAPB-203ENST00000463370 RNF186Q9NXI6 227 aa13.51□□□□□ -0.25
VAPB-203ENST00000463370 ST3GAL5Q9UNP4 418 aa13.51□□□□□ -0.25
VAPB-203ENST00000463370 GRIN2DO15399 1336 aa13.5□□□□□ -0.25
VAPB-203ENST00000463370 GOLGA6CA6NDK9 693 aa13.5□□□□□ -0.25
VAPB-203ENST00000463370 C3orf70A6NLC5 250 aaPredicted RBP13.5□□□□□ -0.25
VAPB-203ENST00000463370 KIF3CO14782 793 aa13.5□□□□□ -0.25
VAPB-203ENST00000463370 GOLGA6DP0CG33 693 aa13.5□□□□□ -0.25
VAPB-203ENST00000463370 PPP1R7Q15435 360 aa13.5□□□□□ -0.25
VAPB-203ENST00000463370 LRRC38Q5VT99 294 aa13.5□□□□□ -0.25
VAPB-203ENST00000463370 SPOCD1Q6ZMY3 1216 aa13.5□□□□□ -0.25
VAPB-203ENST00000463370 SLCO2A1Q92959 643 aa13.5□□□□□ -0.25
VAPB-203ENST00000463370 LRRC45Q96CN5 670 aa13.5□□□□□ -0.25
VAPB-203ENST00000463370 HAUS1Q96CS2 278 aa13.5□□□□□ -0.25
VAPB-203ENST00000463370 GOLGA6AQ9NYA3 693 aa13.5□□□□□ -0.25
VAPB-203ENST00000463370 LRRD1A4D1F6 860 aa13.5□□□□□ -0.25
VAPB-203ENST00000463370 A8MXQ7 604 aa13.5□□□□□ -0.25
VAPB-203ENST00000463370 KPNA7A9QM74 516 aa13.5□□□□□ -0.25
VAPB-203ENST00000463370 PPFIA2O75334 1257 aa13.5□□□□□ -0.25
VAPB-203ENST00000463370 ASGR1P07306 291 aa13.5□□□□□ -0.25
VAPB-203ENST00000463370 CD48P09326 243 aa13.5□□□□□ -0.25
VAPB-203ENST00000463370 RARBP10826 455 aa13.5□□□□□ -0.25
VAPB-203ENST00000463370 CCDC130P13994 396 aa13.5□□□□□ -0.25
VAPB-203ENST00000463370 RCOR2Q8IZ40 523 aa13.5□□□□□ -0.25
VAPB-203ENST00000463370 LPPQ93052 612 aa13.5□□□□□ -0.25
VAPB-203ENST00000463370 EXOC4Q96A65 974 aa13.5□□□□□ -0.25
VAPB-203ENST00000463370 CCDC114Q96M63 670 aa13.5□□□□□ -0.25
VAPB-203ENST00000463370 AGO3Q9H9G7 860 aaKnown RBP13.5□□□□□ -0.25
VAPB-203ENST00000463370 XPNPEP3Q9NQH7 507 aa13.5□□□□□ -0.25
VAPB-203ENST00000463370 PCSK1NQ9UHG2 260 aa13.5□□□□□ -0.25
VAPB-203ENST00000463370 NEU2Q9Y3R4 380 aa13.5□□□□□ -0.25
VAPB-203ENST00000463370 TRIP11Q15643 1979 aa13.5□□□□□ -0.25
VAPB-203ENST00000463370 OPA1O60313 960 aa13.49□□□□□ -0.25
VAPB-203ENST00000463370 PRKAR2AP13861 404 aaKnown RBP13.49□□□□□ -0.25
VAPB-203ENST00000463370 IVDP26440 423 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms