RNA–Protein interactions for RNA: ENST00000462968.2

CD46-210, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 473 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-210ENST00000462968 TMEM260Q9NX78 707 aa3.36□□□□□ -1.87
CD46-210ENST00000462968 VTI1BQ9UEU0 232 aa3.36□□□□□ -1.87
CD46-210ENST00000462968 LZTS1Q9Y250 596 aa3.36□□□□□ -1.87
CD46-210ENST00000462968 RAI2Q9Y5P3 530 aa3.36□□□□□ -1.87
CD46-210ENST00000462968 SCN5AQ14524 2016 aa3.36□□□□□ -1.87
CD46-210ENST00000462968 SIPA1L1O43166 1804 aa3.35□□□□□ -1.87
CD46-210ENST00000462968 COL11A1P12107 1806 aaPredicted RBP3.35□□□□□ -1.87
CD46-210ENST00000462968 MYH2Q9UKX2 1941 aa3.35□□□□□ -1.87
CD46-210ENST00000462968 DMXL2Q8TDJ6 3036 aa3.35□□□□□ -1.87
CD46-210ENST00000462968 C17orf102A2RUQ5 167 aa3.35□□□□□ -1.87
CD46-210ENST00000462968 HIDE1A8MVS5 230 aa3.35□□□□□ -1.87
CD46-210ENST00000462968 B4DLN1 442 aa3.35□□□□□ -1.87
CD46-210ENST00000462968 J3QKU1 62 aa3.35□□□□□ -1.87
CD46-210ENST00000462968 NCAM2O15394 837 aa3.35□□□□□ -1.87
CD46-210ENST00000462968 KRT38O76015 456 aa3.35□□□□□ -1.87
CD46-210ENST00000462968 NDUFB10O96000 172 aa3.35□□□□□ -1.87
CD46-210ENST00000462968 F2P00734 622 aa3.35□□□□□ -1.87
CD46-210ENST00000462968 STAG3L1P0CL83 205 aa3.35□□□□□ -1.87
CD46-210ENST00000462968 ALAS1P13196 640 aa3.35□□□□□ -1.87
CD46-210ENST00000462968 NCLP19338 710 aaKnown RBP3.35□□□□□ -1.87
CD46-210ENST00000462968 GUCY2CP25092 1073 aa3.35□□□□□ -1.87
CD46-210ENST00000462968 NOVA1P51513 510 aaKnown RBP3.35□□□□□ -1.87
CD46-210ENST00000462968 MRPL12P52815 198 aaKnown RBP3.35□□□□□ -1.87
CD46-210ENST00000462968 TROAPQ12815 778 aa3.35□□□□□ -1.87
CD46-210ENST00000462968 TUBA3CQ13748 450 aa3.35□□□□□ -1.87
CD46-210ENST00000462968 SIM2Q14190 667 aaPredicted RBP3.35□□□□□ -1.87
CD46-210ENST00000462968 RALBP1Q15311 655 aa3.35□□□□□ -1.87
CD46-210ENST00000462968 PTPN14Q15678 1187 aa3.35□□□□□ -1.87
CD46-210ENST00000462968 CCDC6Q16204 474 aa3.35□□□□□ -1.87
CD46-210ENST00000462968 INF2Q27J81 1249 aa3.35□□□□□ -1.87
CD46-210ENST00000462968 PAN2Q504Q3 1202 aaKnown RBP3.35□□□□□ -1.87
CD46-210ENST00000462968 MUM1L1Q5H9M0 696 aa3.35□□□□□ -1.87
CD46-210ENST00000462968 CCDC158Q5M9N0 1113 aa3.35□□□□□ -1.87
CD46-210ENST00000462968 SPOUT1Q5T280 376 aaKnown RBP3.35□□□□□ -1.87
CD46-210ENST00000462968 PLPP4Q5VZY2 271 aa3.35□□□□□ -1.87
CD46-210ENST00000462968 CCDC62Q6P9F0 684 aa3.35□□□□□ -1.87
CD46-210ENST00000462968 TUBA3EQ6PEY2 450 aa3.35□□□□□ -1.87
CD46-210ENST00000462968 TSSK4Q6SA08 328 aa3.35□□□□□ -1.87
CD46-210ENST00000462968 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.35□□□□□ -1.87
CD46-210ENST00000462968 GPR149Q86SP6 731 aa3.35□□□□□ -1.87
CD46-210ENST00000462968 THNSL1Q8IYQ7 743 aa3.35□□□□□ -1.87
CD46-210ENST00000462968 C12orf76Q8N812 135 aaPredicted RBP3.35□□□□□ -1.87
CD46-210ENST00000462968 MRPL43Q8N983 215 aaKnown RBP3.35□□□□□ -1.87
CD46-210ENST00000462968 RBBP8NLQ8NC74 664 aaPredicted RBP3.35□□□□□ -1.87
CD46-210ENST00000462968 RSAD2Q8WXG1 361 aa3.35□□□□□ -1.87
CD46-210ENST00000462968 MRPS27Q92552 414 aaKnown RBP3.35□□□□□ -1.87
CD46-210ENST00000462968 ATP6V0A1Q93050 837 aa3.35□□□□□ -1.87
CD46-210ENST00000462968 DYNLL2Q96FJ2 89 aa3.35□□□□□ -1.87
CD46-210ENST00000462968 RCC1LQ96I51 464 aaKnown RBP3.35□□□□□ -1.87
CD46-210ENST00000462968 KLHL5Q96PQ7 755 aa3.35□□□□□ -1.87
CD46-210ENST00000462968 PLEKHG4BQ96PX9 1271 aa3.35□□□□□ -1.87
CD46-210ENST00000462968 RIOK1Q9BRS2 568 aaKnown RBP3.35□□□□□ -1.87
CD46-210ENST00000462968 DDX23Q9BUQ8 820 aaKnown RBP3.35□□□□□ -1.87
CD46-210ENST00000462968 CRNKL1Q9BZJ0 848 aaKnown RBP3.35□□□□□ -1.87
CD46-210ENST00000462968 ENTPD7Q9NQZ7 604 aa3.35□□□□□ -1.87
CD46-210ENST00000462968 PRMT8Q9NR22 394 aaPredicted RBP3.35□□□□□ -1.87
CD46-210ENST00000462968 SLC2A4RGQ9NR83 387 aa3.35□□□□□ -1.87
CD46-210ENST00000462968 HSPBP1Q9NZL4 362 aa3.35□□□□□ -1.87
CD46-210ENST00000462968 NYAP2Q9P242 653 aa3.35□□□□□ -1.87
CD46-210ENST00000462968 TMEFF2Q9UIK5 374 aaPredicted RBP3.35□□□□□ -1.87
CD46-210ENST00000462968 PA2G4Q9UQ80 394 aaKnown RBP3.35□□□□□ -1.87
CD46-210ENST00000462968 MSRB2Q9Y3D2 182 aa3.35□□□□□ -1.87
CD46-210ENST00000462968 NEUROG3Q9Y4Z2 214 aa3.35□□□□□ -1.87
CD46-210ENST00000462968 SLC30A1Q9Y6M5 507 aa3.35□□□□□ -1.87
CD46-210ENST00000462968 X6R8D5 127 aa3.35□□□□□ -1.87
CD46-210ENST00000462968 NAV2Q8IVL1 2488 aa3.35□□□□□ -1.87
CD46-210ENST00000462968 TANC1Q9C0D5 1861 aa3.35□□□□□ -1.87
CD46-210ENST00000462968 PTPRSQ13332 1948 aa3.34□□□□□ -1.87
CD46-210ENST00000462968 TET1Q8NFU7 2136 aa3.34□□□□□ -1.87
CD46-210ENST00000462968 HELZ2Q9BYK8 2649 aaKnown RBP3.34□□□□□ -1.87
CD46-210ENST00000462968 TCRBV5S2A0A599 114 aa3.34□□□□□ -1.87
CD46-210ENST00000462968 CLASP2O75122 1294 aaKnown RBP3.34□□□□□ -1.87
CD46-210ENST00000462968 PPFIA4O75335 1185 aa3.34□□□□□ -1.87
CD46-210ENST00000462968 IDH1O75874 414 aaKnown RBP3.34□□□□□ -1.87
CD46-210ENST00000462968 ARIH2O95376 493 aa3.34□□□□□ -1.87
CD46-210ENST00000462968 TOP3BO95985 862 aaKnown RBP3.34□□□□□ -1.87
CD46-210ENST00000462968 KNG1P01042 644 aa3.34□□□□□ -1.87
CD46-210ENST00000462968 PRB1P04280 392 aa3.34□□□□□ -1.87
CD46-210ENST00000462968 CAPNS1P04632 268 aa3.34□□□□□ -1.87
CD46-210ENST00000462968 CHGBP05060 677 aa3.34□□□□□ -1.87
CD46-210ENST00000462968 ZNF806P0C7X5 589 aa3.34□□□□□ -1.87
CD46-210ENST00000462968 GHRP10912 638 aa3.34□□□□□ -1.87
CD46-210ENST00000462968 GNAT1P11488 350 aa3.34□□□□□ -1.87
CD46-210ENST00000462968 CEACAM1P13688 526 aa3.34□□□□□ -1.87
CD46-210ENST00000462968 EDNRBP24530 442 aa3.34□□□□□ -1.87
CD46-210ENST00000462968 FPR2P25090 351 aa3.34□□□□□ -1.87
CD46-210ENST00000462968 ACRV1P26436 265 aa3.34□□□□□ -1.87
CD46-210ENST00000462968 HOXC8P31273 242 aa3.34□□□□□ -1.87
CD46-210ENST00000462968 RPS9P46781 194 aaKnown RBP3.34□□□□□ -1.87
CD46-210ENST00000462968 STAT2P52630 851 aa3.34□□□□□ -1.87
CD46-210ENST00000462968 KRT17Q04695 432 aa3.34□□□□□ -1.87
CD46-210ENST00000462968 SRSF1Q07955 248 aaKnown RBP eCLIP3.34□□□□□ -1.873e-6■□□□□ 8.3
CD46-210ENST00000462968 ARHGAP1Q07960 439 aa3.34□□□□□ -1.87
CD46-210ENST00000462968 KCNA1Q09470 495 aa3.34□□□□□ -1.87
CD46-210ENST00000462968 BAATQ14032 418 aaPredicted RBP3.34□□□□□ -1.87
CD46-210ENST00000462968 SMC1AQ14683 1233 aaKnown RBP3.34□□□□□ -1.87
CD46-210ENST00000462968 BMS1Q14692 1282 aaKnown RBP3.34□□□□□ -1.87
CD46-210ENST00000462968 UBXN2BQ14CS0 331 aa3.34□□□□□ -1.87
CD46-210ENST00000462968 LY6KQ17RY6 165 aa3.34□□□□□ -1.87
CD46-210ENST00000462968 LETM2Q2VYF4 491 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms