RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 MAPRE1Q15691 268 aaKnown RBP11.99□□□□□ -0.49
SSBP1-202ENST00000461433 UVSSAQ2YD98 709 aa11.99□□□□□ -0.49
SSBP1-202ENST00000461433 PPP1R26Q5T8A7 1209 aaPredicted RBP11.99□□□□□ -0.49
SSBP1-202ENST00000461433 SMYD5Q6GMV2 418 aa11.99□□□□□ -0.49
SSBP1-202ENST00000461433 ANKRD54Q6NXT1 300 aa11.99□□□□□ -0.49
SSBP1-202ENST00000461433 FAM71AQ8IYT1 594 aa11.99□□□□□ -0.49
SSBP1-202ENST00000461433 C12orf76Q8N812 135 aaPredicted RBP11.99□□□□□ -0.49
SSBP1-202ENST00000461433 RBBP8NLQ8NC74 664 aaPredicted RBP11.99□□□□□ -0.49
SSBP1-202ENST00000461433 MAFAQ8NHW3 353 aaPredicted RBP11.99□□□□□ -0.49
SSBP1-202ENST00000461433 SLC7A14Q8TBB6 771 aa11.99□□□□□ -0.49
SSBP1-202ENST00000461433 SPPL2BQ8TCT7 592 aa11.99□□□□□ -0.49
SSBP1-202ENST00000461433 TFAP2BQ92481 460 aa11.99□□□□□ -0.49
SSBP1-202ENST00000461433 FUBP3Q96I24 572 aaKnown RBP eCLIP11.99□□□□□ -0.49
SSBP1-202ENST00000461433 MSLNLQ96KJ4 702 aa11.99□□□□□ -0.49
SSBP1-202ENST00000461433 PCMTD1Q96MG8 357 aaPredicted RBP11.99□□□□□ -0.49
SSBP1-202ENST00000461433 HEXIM2Q96MH2 286 aaKnown RBP11.99□□□□□ -0.49
SSBP1-202ENST00000461433 CYP4F11Q9HBI6 524 aa11.99□□□□□ -0.49
SSBP1-202ENST00000461433 ABCB6Q9NP58 842 aa11.99□□□□□ -0.49
SSBP1-202ENST00000461433 ACP6Q9NPH0 428 aa11.99□□□□□ -0.49
SSBP1-202ENST00000461433 NLRC4Q9NPP4 1024 aa11.99□□□□□ -0.49
SSBP1-202ENST00000461433 FAM49BQ9NUQ9 324 aa11.99□□□□□ -0.49
SSBP1-202ENST00000461433 ABI2Q9NYB9 513 aaPredicted RBP11.99□□□□□ -0.49
SSBP1-202ENST00000461433 CEP72Q9P209 647 aa11.99□□□□□ -0.49
SSBP1-202ENST00000461433 INSL5Q9Y5Q6 135 aa11.99□□□□□ -0.49
SSBP1-202ENST00000461433 GREB1Q4ZG55 1949 aa11.98□□□□□ -0.49
SSBP1-202ENST00000461433 DOCK6Q96HP0 2047 aa11.98□□□□□ -0.49
SSBP1-202ENST00000461433 F8VZ95 297 aa11.98□□□□□ -0.49
SSBP1-202ENST00000461433 SOAT2O75908 522 aa11.98□□□□□ -0.49
SSBP1-202ENST00000461433 C8AP07357 584 aa11.98□□□□□ -0.49
SSBP1-202ENST00000461433 PAEPP09466 180 aa11.98□□□□□ -0.49
SSBP1-202ENST00000461433 KRT5P13647 590 aa11.98□□□□□ -0.49
SSBP1-202ENST00000461433 BDNFP23560 247 aa11.98□□□□□ -0.49
SSBP1-202ENST00000461433 CLCN1P35523 988 aa11.98□□□□□ -0.49
SSBP1-202ENST00000461433 CYP27A1Q02318 531 aa11.98□□□□□ -0.49
SSBP1-202ENST00000461433 RAPGEF1Q13905 1077 aa11.98□□□□□ -0.49
SSBP1-202ENST00000461433 C4orf50Q6ZRC1 276 aa11.98□□□□□ -0.49
SSBP1-202ENST00000461433 RTL10Q7L3V2 364 aa11.98□□□□□ -0.49
SSBP1-202ENST00000461433 SPATA2LQ8IUW3 424 aaPredicted RBP11.98□□□□□ -0.49
SSBP1-202ENST00000461433 SLC2A14Q8TDB8 520 aa11.98□□□□□ -0.49
SSBP1-202ENST00000461433 BAP1Q92560 729 aa11.98□□□□□ -0.49
SSBP1-202ENST00000461433 ZNF707Q96C28 371 aaPredicted RBP11.98□□□□□ -0.49
SSBP1-202ENST00000461433 CYFIP2Q96F07 1278 aa11.98□□□□□ -0.49
SSBP1-202ENST00000461433 HNRNPABQ99729 332 aaKnown RBP11.98□□□□□ -0.49
SSBP1-202ENST00000461433 ZNF518BQ9C0D4 1074 aa11.98□□□□□ -0.49
SSBP1-202ENST00000461433 S1PR5Q9H228 398 aa11.98□□□□□ -0.49
SSBP1-202ENST00000461433 DAAM1Q9Y4D1 1078 aa11.98□□□□□ -0.49
SSBP1-202ENST00000461433 NOTCH4Q99466 2003 aa11.98□□□□□ -0.49
SSBP1-202ENST00000461433 MYH10P35580 1976 aa11.98□□□□□ -0.49
SSBP1-202ENST00000461433 PRRG1O14668 218 aa11.97□□□□□ -0.49
SSBP1-202ENST00000461433 CYP26A1O43174 497 aa11.97□□□□□ -0.49
SSBP1-202ENST00000461433 CBFA2T2O43439 604 aa11.97□□□□□ -0.49
SSBP1-202ENST00000461433 VDRP11473 427 aa11.97□□□□□ -0.49
SSBP1-202ENST00000461433 ATF6P18850 670 aa11.97□□□□□ -0.49
SSBP1-202ENST00000461433 ELF1P32519 619 aa11.97□□□□□ -0.49
SSBP1-202ENST00000461433 MAGEA11P43364 429 aa11.97□□□□□ -0.49
SSBP1-202ENST00000461433 GPR15P49685 360 aa11.97□□□□□ -0.49
SSBP1-202ENST00000461433 FIGNQ5HY92 759 aa11.97□□□□□ -0.49
SSBP1-202ENST00000461433 LIN9Q5TKA1 542 aa11.97□□□□□ -0.49
SSBP1-202ENST00000461433 ARHGAP17Q68EM7 881 aa11.97□□□□□ -0.49
SSBP1-202ENST00000461433 CCDC149Q6ZUS6 474 aa11.97□□□□□ -0.49
SSBP1-202ENST00000461433 FAM35AQ86V20 835 aa11.97□□□□□ -0.49
SSBP1-202ENST00000461433 UBE2ZQ9H832 354 aaPredicted RBP11.97□□□□□ -0.49
SSBP1-202ENST00000461433 DZANK1Q9NVP4 752 aa11.97□□□□□ -0.49
SSBP1-202ENST00000461433 ZDHHC7Q9NXF8 308 aa11.97□□□□□ -0.49
SSBP1-202ENST00000461433 KIAA1257Q9ULG3 409 aa11.97□□□□□ -0.49
SSBP1-202ENST00000461433 YIPF1Q9Y548 306 aa11.97□□□□□ -0.49
SSBP1-202ENST00000461433 BRWD1Q9NSI6 2320 aa11.97□□□□□ -0.49
SSBP1-202ENST00000461433 ITIH6Q6UXX5 1313 aa11.97□□□□□ -0.49
SSBP1-202ENST00000461433 CCDC195A0A1B0GUA6 201 aa11.97□□□□□ -0.49
SSBP1-202ENST00000461433 O00370 1275 aa11.97□□□□□ -0.49
SSBP1-202ENST00000461433 BEST1O76090 585 aa11.97□□□□□ -0.49
SSBP1-202ENST00000461433 HOXB8P17481 243 aaPredicted RBP11.97□□□□□ -0.49
SSBP1-202ENST00000461433 HOXA9P31269 272 aa11.97□□□□□ -0.49
SSBP1-202ENST00000461433 USP8P40818 1118 aa11.97□□□□□ -0.49
SSBP1-202ENST00000461433 TUFMP49411 452 aaKnown RBP11.97□□□□□ -0.49
SSBP1-202ENST00000461433 PLCB2Q00722 1185 aa11.97□□□□□ -0.49
SSBP1-202ENST00000461433 DDR2Q16832 855 aa11.97□□□□□ -0.49
SSBP1-202ENST00000461433 MGAT5BQ3V5L5 792 aa11.97□□□□□ -0.49
SSBP1-202ENST00000461433 PPM1LQ5SGD2 360 aa11.97□□□□□ -0.49
SSBP1-202ENST00000461433 VSTM1Q6UX27 236 aa11.97□□□□□ -0.49
SSBP1-202ENST00000461433 VSTM4Q8IW00 320 aa11.97□□□□□ -0.49
SSBP1-202ENST00000461433 ZMIZ2Q8NF64 920 aa11.97□□□□□ -0.49
SSBP1-202ENST00000461433 CMASQ8NFW8 434 aaPredicted RBP11.97□□□□□ -0.49
SSBP1-202ENST00000461433 KCNK16Q96T55 309 aa11.97□□□□□ -0.49
SSBP1-202ENST00000461433 PRKD2Q9BZL6 878 aa11.97□□□□□ -0.49
SSBP1-202ENST00000461433 TRIM5Q9C035 493 aa11.97□□□□□ -0.49
SSBP1-202ENST00000461433 SFXN1Q9H9B4 322 aa11.97□□□□□ -0.49
SSBP1-202ENST00000461433 CSNK1G1Q9HCP0 422 aa11.97□□□□□ -0.49
SSBP1-202ENST00000461433 PRDM6Q9NQX0 595 aa11.97□□□□□ -0.49
SSBP1-202ENST00000461433 DPP7Q9UHL4 492 aa11.97□□□□□ -0.49
SSBP1-202ENST00000461433 CDH22Q9UJ99 828 aa11.97□□□□□ -0.49
SSBP1-202ENST00000461433 PATJQ8NI35 1801 aa11.97□□□□□ -0.49
SSBP1-202ENST00000461433 TPM3P06753 285 aa11.96□□□□□ -0.5
SSBP1-202ENST00000461433 HNRNPA1P09651 372 aaKnown RBP eCLIP11.96□□□□□ -0.5
SSBP1-202ENST00000461433 SRGAP2BP0DMP2 458 aa11.96□□□□□ -0.5
SSBP1-202ENST00000461433 CD19P15391 556 aa11.96□□□□□ -0.5
SSBP1-202ENST00000461433 TRIM21P19474 475 aaKnown RBP11.96□□□□□ -0.5
SSBP1-202ENST00000461433 BRD2P25440 801 aaKnown RBP11.96□□□□□ -0.5
SSBP1-202ENST00000461433 ADORA2BP29275 332 aa11.96□□□□□ -0.5
SSBP1-202ENST00000461433 SOX5P35711 763 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms