RNA–Protein interactions for RNA: ENST00000460235.1

HDAC4-206, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 343 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-206ENST00000460235 PCDHGC3Q9UN70 934 aa13.09□□□□□ -0.31
HDAC4-206ENST00000460235 NLRC5Q86WI3 1866 aa13.08□□□□□ -0.32
HDAC4-206ENST00000460235 SSU72P8A0A1W2PR75 194 aa13.08□□□□□ -0.32
HDAC4-206ENST00000460235 RBAK-RBAKDNI3L0D1 243 aa13.08□□□□□ -0.32
HDAC4-206ENST00000460235 ABLIM3O94929 683 aa13.08□□□□□ -0.32
HDAC4-206ENST00000460235 POU3F3P20264 500 aaPredicted RBP13.08□□□□□ -0.32
HDAC4-206ENST00000460235 IGFBP6P24592 240 aaPredicted RBP13.08□□□□□ -0.32
HDAC4-206ENST00000460235 CYLC1P35663 651 aaPredicted RBP13.08□□□□□ -0.32
HDAC4-206ENST00000460235 ACADSBP45954 432 aa13.08□□□□□ -0.32
HDAC4-206ENST00000460235 ADKP55263 362 aaKnown RBP13.08□□□□□ -0.32
HDAC4-206ENST00000460235 PSMC1P62191 440 aaKnown RBP13.08□□□□□ -0.32
HDAC4-206ENST00000460235 BST2Q10589 180 aaKnown RBP13.08□□□□□ -0.32
HDAC4-206ENST00000460235 TAF12Q16514 161 aa13.08□□□□□ -0.32
HDAC4-206ENST00000460235 IRF2BP2Q7Z5L9 587 aa13.08□□□□□ -0.32
HDAC4-206ENST00000460235 ITIH5Q86UX2 942 aa13.08□□□□□ -0.32
HDAC4-206ENST00000460235 TCEAL8Q8IYN2 117 aa13.08□□□□□ -0.32
HDAC4-206ENST00000460235 CCDC170Q8IYT3 715 aa13.08□□□□□ -0.32
HDAC4-206ENST00000460235 OR10T2Q8NGX3 314 aa13.08□□□□□ -0.32
HDAC4-206ENST00000460235 SLC2A14Q8TDB8 520 aa13.08□□□□□ -0.32
HDAC4-206ENST00000460235 GDPD5Q8WTR4 605 aa13.08□□□□□ -0.32
HDAC4-206ENST00000460235 STK32AQ8WU08 396 aa13.08□□□□□ -0.32
HDAC4-206ENST00000460235 ELMO3Q96BJ8 720 aa13.08□□□□□ -0.32
HDAC4-206ENST00000460235 PCED1BQ96HM7 432 aa13.08□□□□□ -0.32
HDAC4-206ENST00000460235 AGPAT1Q99943 283 aa13.08□□□□□ -0.32
HDAC4-206ENST00000460235 RTP3Q9BQQ7 232 aa13.08□□□□□ -0.32
HDAC4-206ENST00000460235 DUSP16Q9BY84 665 aa13.08□□□□□ -0.32
HDAC4-206ENST00000460235 GPR88Q9GZN0 384 aa13.08□□□□□ -0.32
HDAC4-206ENST00000460235 PNPLA8Q9NP80 782 aa13.08□□□□□ -0.32
HDAC4-206ENST00000460235 DMAP1Q9NPF5 467 aaPredicted RBP13.08□□□□□ -0.32
HDAC4-206ENST00000460235 CYLDQ9NQC7 956 aa13.08□□□□□ -0.32
HDAC4-206ENST00000460235 SEPT11Q9NVA2 429 aaKnown RBP13.08□□□□□ -0.32
HDAC4-206ENST00000460235 DZANK1Q9NVP4 752 aa13.08□□□□□ -0.32
HDAC4-206ENST00000460235 COMMD8Q9NX08 183 aa13.08□□□□□ -0.32
HDAC4-206ENST00000460235 ABI2Q9NYB9 513 aaPredicted RBP13.08□□□□□ -0.32
HDAC4-206ENST00000460235 ASB3Q9Y575 518 aa13.08□□□□□ -0.32
HDAC4-206ENST00000460235 MYBPHLA2RUH7 354 aa13.07□□□□□ -0.32
HDAC4-206ENST00000460235 O00370 1275 aa13.07□□□□□ -0.32
HDAC4-206ENST00000460235 AKR1B10O60218 316 aa13.07□□□□□ -0.32
HDAC4-206ENST00000460235 AP1G2O75843 785 aa13.07□□□□□ -0.32
HDAC4-206ENST00000460235 ARHGEF15O94989 841 aa13.07□□□□□ -0.32
HDAC4-206ENST00000460235 NPR3P17342 541 aa13.07□□□□□ -0.32
HDAC4-206ENST00000460235 GRIK1P39086 918 aa13.07□□□□□ -0.32
HDAC4-206ENST00000460235 EPHB3P54753 998 aa13.07□□□□□ -0.32
HDAC4-206ENST00000460235 ADCY1Q08828 1119 aa13.07□□□□□ -0.32
HDAC4-206ENST00000460235 PTPN21Q16825 1174 aa13.07□□□□□ -0.32
HDAC4-206ENST00000460235 C10orf76Q5T2E6 689 aa13.07□□□□□ -0.32
HDAC4-206ENST00000460235 SLC47A2Q86VL8 602 aa13.07□□□□□ -0.32
HDAC4-206ENST00000460235 EPS8L1Q8TE68 723 aa13.07□□□□□ -0.32
HDAC4-206ENST00000460235 IPO4Q8TEX9 1081 aaKnown RBP13.07□□□□□ -0.32
HDAC4-206ENST00000460235 CASP10Q92851 521 aa13.07□□□□□ -0.32
HDAC4-206ENST00000460235 MYLPFQ96A32 169 aa13.07□□□□□ -0.32
HDAC4-206ENST00000460235 TRIM11Q96F44 468 aa13.07□□□□□ -0.32
HDAC4-206ENST00000460235 C8orf48Q96LL4 319 aa13.07□□□□□ -0.32
HDAC4-206ENST00000460235 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.07□□□□□ -0.32
HDAC4-206ENST00000460235 SYNCQ9H7C4 482 aa13.07□□□□□ -0.32
HDAC4-206ENST00000460235 CYP4F11Q9HBI6 524 aa13.07□□□□□ -0.32
HDAC4-206ENST00000460235 CRTAC1Q9NQ79 661 aa13.07□□□□□ -0.32
HDAC4-206ENST00000460235 FAM49BQ9NUQ9 324 aa13.07□□□□□ -0.32
HDAC4-206ENST00000460235 TSPAN16Q9UKR8 245 aa13.07□□□□□ -0.32
HDAC4-206ENST00000460235 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.07□□□□□ -0.32
HDAC4-206ENST00000460235 WDR27A2RRH5 827 aa13.06□□□□□ -0.32
HDAC4-206ENST00000460235 MTMR11A4FU01 709 aa13.06□□□□□ -0.32
HDAC4-206ENST00000460235 M0QYV0 167 aa13.06□□□□□ -0.32
HDAC4-206ENST00000460235 RNF225M0QZC1 329 aaPredicted RBP13.06□□□□□ -0.32
HDAC4-206ENST00000460235 SART1O43290 800 aaKnown RBP13.06□□□□□ -0.32
HDAC4-206ENST00000460235 ATP2C2O75185 946 aa13.06□□□□□ -0.32
HDAC4-206ENST00000460235 XYLBO75191 536 aa13.06□□□□□ -0.32
HDAC4-206ENST00000460235 RTN3O95197 1032 aaPredicted RBP13.06□□□□□ -0.32
HDAC4-206ENST00000460235 FGF19O95750 216 aa13.06□□□□□ -0.32
HDAC4-206ENST00000460235 LRG1P02750 347 aa13.06□□□□□ -0.32
HDAC4-206ENST00000460235 HNRNPA1P09651 372 aaKnown RBP eCLIP13.06□□□□□ -0.32
HDAC4-206ENST00000460235 GZMAP12544 262 aa13.06□□□□□ -0.32
HDAC4-206ENST00000460235 RPL17P18621 184 aaKnown RBP13.06□□□□□ -0.32
HDAC4-206ENST00000460235 BRD2P25440 801 aaKnown RBP13.06□□□□□ -0.32
HDAC4-206ENST00000460235 DNAJB1P25685 340 aa13.06□□□□□ -0.32
HDAC4-206ENST00000460235 ADORA2BP29275 332 aa13.06□□□□□ -0.32
HDAC4-206ENST00000460235 HOXA9P31269 272 aa13.06□□□□□ -0.32
HDAC4-206ENST00000460235 MAPK8IP2Q13387 824 aaPredicted RBP13.06□□□□□ -0.32
HDAC4-206ENST00000460235 SPA17Q15506 151 aa13.06□□□□□ -0.32
HDAC4-206ENST00000460235 GOLGA7BQ2TAP0 167 aa13.06□□□□□ -0.32
HDAC4-206ENST00000460235 MGAT5BQ3V5L5 792 aa13.06□□□□□ -0.32
HDAC4-206ENST00000460235 HABP4Q5JVS0 413 aaKnown RBP13.06□□□□□ -0.32
HDAC4-206ENST00000460235 PPP1R26Q5T8A7 1209 aaPredicted RBP13.06□□□□□ -0.32
HDAC4-206ENST00000460235 CCDC186Q7Z3E2 898 aa13.06□□□□□ -0.32
HDAC4-206ENST00000460235 FAM35AQ86V20 835 aa13.06□□□□□ -0.32
HDAC4-206ENST00000460235 PALB2Q86YC2 1186 aa13.06□□□□□ -0.32
HDAC4-206ENST00000460235 FUKQ8N0W3 1084 aa13.06□□□□□ -0.32
HDAC4-206ENST00000460235 C12orf29Q8N999 325 aa13.06□□□□□ -0.32
HDAC4-206ENST00000460235 TC2NQ8N9U0 490 aa13.06□□□□□ -0.32
HDAC4-206ENST00000460235 KREMEN2Q8NCW0 462 aa13.06□□□□□ -0.32
HDAC4-206ENST00000460235 AUTS2Q8WXX7 1259 aa13.06□□□□□ -0.32
HDAC4-206ENST00000460235 HSFY1Q96LI6 401 aa13.06□□□□□ -0.32
HDAC4-206ENST00000460235 TWNKQ96RR1 684 aa13.06□□□□□ -0.32
HDAC4-206ENST00000460235 PKMYT1Q99640 499 aa13.06□□□□□ -0.32
HDAC4-206ENST00000460235 BAG1Q99933 345 aaPredicted RBP13.06□□□□□ -0.32
HDAC4-206ENST00000460235 TRIM62Q9BVG3 475 aa13.06□□□□□ -0.32
HDAC4-206ENST00000460235 B3GNT5Q9BYG0 378 aa13.06□□□□□ -0.32
HDAC4-206ENST00000460235 DPEP3Q9H4B8 488 aa13.06□□□□□ -0.32
HDAC4-206ENST00000460235 FBXO44Q9H4M3 255 aa13.06□□□□□ -0.32
HDAC4-206ENST00000460235 PRDM12Q9H4Q4 367 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms