RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 THAP12O43422 761 aa10.96□□□□□ -0.65
HERC4-207ENST00000460168 PALMO75781 387 aa10.96□□□□□ -0.65
HERC4-207ENST00000460168 MTA2O94776 668 aa10.96□□□□□ -0.65
HERC4-207ENST00000460168 GHRP10912 638 aa10.96□□□□□ -0.65
HERC4-207ENST00000460168 NEK2P51955 445 aa10.96□□□□□ -0.65
HERC4-207ENST00000460168 CSE1LP55060 971 aaKnown RBP10.96□□□□□ -0.65
HERC4-207ENST00000460168 MGAT3Q09327 533 aa10.96□□□□□ -0.65
HERC4-207ENST00000460168 MYO1EQ12965 1108 aa10.96□□□□□ -0.65
HERC4-207ENST00000460168 NAA25Q14CX7 972 aa10.96□□□□□ -0.65
HERC4-207ENST00000460168 RFFLQ8WZ73 363 aa10.96□□□□□ -0.65
HERC4-207ENST00000460168 CLIP3Q96DZ5 547 aa10.96□□□□□ -0.65
HERC4-207ENST00000460168 CENPOQ9BU64 300 aa10.96□□□□□ -0.65
HERC4-207ENST00000460168 THAP2Q9H0W7 228 aa10.96□□□□□ -0.65
HERC4-207ENST00000460168 ISCUQ9H1K1 167 aa10.96□□□□□ -0.65
HERC4-207ENST00000460168 CXCL16Q9H2A7 254 aa10.96□□□□□ -0.65
HERC4-207ENST00000460168 RNF39Q9H2S5 420 aa10.96□□□□□ -0.65
HERC4-207ENST00000460168 RNF19AQ9NV58 838 aa10.96□□□□□ -0.65
HERC4-207ENST00000460168 CDC23Q9UJX2 597 aa10.96□□□□□ -0.65
HERC4-207ENST00000460168 SAR1BQ9Y6B6 198 aa10.96□□□□□ -0.65
HERC4-207ENST00000460168 ZFXP17010 805 aaPredicted RBP10.96□□□□□ -0.66
HERC4-207ENST00000460168 RAP1GAPP47736 663 aa10.96□□□□□ -0.66
HERC4-207ENST00000460168 CLK1P49759 484 aaKnown RBP10.96□□□□□ -0.66
HERC4-207ENST00000460168 TNNC1P63316 161 aa10.96□□□□□ -0.66
HERC4-207ENST00000460168 PAK2Q13177 524 aa10.96□□□□□ -0.66
HERC4-207ENST00000460168 TUBB2AQ13885 445 aa10.96□□□□□ -0.66
HERC4-207ENST00000460168 EMC10Q5UCC4 262 aa10.96□□□□□ -0.66
HERC4-207ENST00000460168 ALKAL1Q6UXT8 129 aa10.96□□□□□ -0.66
HERC4-207ENST00000460168 HOOK3Q86VS8 718 aa10.96□□□□□ -0.66
HERC4-207ENST00000460168 HACE1Q8IYU2 909 aa10.96□□□□□ -0.66
HERC4-207ENST00000460168 GBP7Q8N8V2 638 aaPredicted RBP10.96□□□□□ -0.66
HERC4-207ENST00000460168 SMG8Q8ND04 991 aaKnown RBP10.96□□□□□ -0.66
HERC4-207ENST00000460168 C18orf25Q96B23 403 aaPredicted RBP10.96□□□□□ -0.66
HERC4-207ENST00000460168 VMP1Q96GC9 406 aa10.96□□□□□ -0.66
HERC4-207ENST00000460168 MMS19Q96T76 1030 aa10.96□□□□□ -0.66
HERC4-207ENST00000460168 TUBB2BQ9BVA1 445 aa10.96□□□□□ -0.66
HERC4-207ENST00000460168 UNC93B1Q9H1C4 597 aa10.96□□□□□ -0.66
HERC4-207ENST00000460168 CCDC68Q9H2F9 335 aa10.96□□□□□ -0.66
HERC4-207ENST00000460168 VRTNQ9H8Y1 702 aa10.96□□□□□ -0.66
HERC4-207ENST00000460168 AGO3Q9H9G7 860 aaKnown RBP10.96□□□□□ -0.66
HERC4-207ENST00000460168 CHST12Q9NRB3 414 aa10.96□□□□□ -0.66
HERC4-207ENST00000460168 FAM105AQ9NUU6 356 aa10.96□□□□□ -0.66
HERC4-207ENST00000460168 PADI3Q9ULW8 664 aa10.96□□□□□ -0.66
HERC4-207ENST00000460168 UBQLN1Q9UMX0 589 aaKnown RBP10.96□□□□□ -0.66
HERC4-207ENST00000460168 SMIM28A0A1B0GU29 152 aa10.95□□□□□ -0.66
HERC4-207ENST00000460168 TLR3O15455 904 aaKnown RBP10.95□□□□□ -0.66
HERC4-207ENST00000460168 XPOTO43592 962 aaKnown RBP10.95□□□□□ -0.66
HERC4-207ENST00000460168 CD52P31358 61 aa10.95□□□□□ -0.66
HERC4-207ENST00000460168 CLCN2P51788 898 aa10.95□□□□□ -0.66
HERC4-207ENST00000460168 CDH8P55286 799 aa10.95□□□□□ -0.66
HERC4-207ENST00000460168 FBXO47Q5MNV8 452 aa10.95□□□□□ -0.66
HERC4-207ENST00000460168 LCA5Q86VQ0 697 aa10.95□□□□□ -0.66
HERC4-207ENST00000460168 UBR7Q8N806 425 aa10.95□□□□□ -0.66
HERC4-207ENST00000460168 SLC35G2Q8TBE7 412 aa10.95□□□□□ -0.66
HERC4-207ENST00000460168 CARD6Q9BX69 1037 aa10.95□□□□□ -0.66
HERC4-207ENST00000460168 BCO2Q9BYV7 579 aa10.95□□□□□ -0.66
HERC4-207ENST00000460168 TRPV6Q9H1D0 765 aa10.95□□□□□ -0.66
HERC4-207ENST00000460168 TMCC3Q9ULS5 477 aa10.95□□□□□ -0.66
HERC4-207ENST00000460168 PTPN22Q9Y2R2 807 aa10.95□□□□□ -0.66
HERC4-207ENST00000460168 NCANO14594 1321 aa10.95□□□□□ -0.66
HERC4-207ENST00000460168 GRID2IPA4D2P6 1211 aa10.94□□□□□ -0.66
HERC4-207ENST00000460168 FTCDO95954 541 aa10.94□□□□□ -0.66
HERC4-207ENST00000460168 DESP17661 470 aa10.94□□□□□ -0.66
HERC4-207ENST00000460168 HOXD11P31277 338 aaPredicted RBP10.94□□□□□ -0.66
HERC4-207ENST00000460168 NSFP46459 744 aaKnown RBP10.94□□□□□ -0.66
HERC4-207ENST00000460168 PSMD7P51665 324 aa10.94□□□□□ -0.66
HERC4-207ENST00000460168 GPC5P78333 572 aa10.94□□□□□ -0.66
HERC4-207ENST00000460168 AMPD2Q01433 879 aa10.94□□□□□ -0.66
HERC4-207ENST00000460168 WASHC5Q12768 1159 aa10.94□□□□□ -0.66
HERC4-207ENST00000460168 ZBTB6Q15916 424 aa10.94□□□□□ -0.66
HERC4-207ENST00000460168 CNGA3Q16281 694 aa10.94□□□□□ -0.66
HERC4-207ENST00000460168 CLEC16AQ2KHT3 1053 aa10.94□□□□□ -0.66
HERC4-207ENST00000460168 ZNF618Q5T7W0 954 aa10.94□□□□□ -0.66
HERC4-207ENST00000460168 PAPD7Q5XG87 772 aaKnown RBP10.94□□□□□ -0.66
HERC4-207ENST00000460168 CAPRIN2Q6IMN6 1127 aaKnown RBP10.94□□□□□ -0.66
HERC4-207ENST00000460168 NEK10Q6ZWH5 1172 aa10.94□□□□□ -0.66
HERC4-207ENST00000460168 PASD1Q8IV76 773 aa10.94□□□□□ -0.66
HERC4-207ENST00000460168 RHOT2Q8IXI1 618 aa10.94□□□□□ -0.66
HERC4-207ENST00000460168 ZNF606Q8WXB4 792 aa10.94□□□□□ -0.66
HERC4-207ENST00000460168 ARHGEF26Q96DR7 871 aa10.94□□□□□ -0.66
HERC4-207ENST00000460168 DEFB118Q96PH6 123 aa10.94□□□□□ -0.66
HERC4-207ENST00000460168 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.94□□□□□ -0.66
HERC4-207ENST00000460168 MUC3BQ9H195 1237 aa10.94□□□□□ -0.66
HERC4-207ENST00000460168 SMYD3Q9H7B4 428 aa10.94□□□□□ -0.66
HERC4-207ENST00000460168 OSGEPQ9NPF4 335 aa10.94□□□□□ -0.66
HERC4-207ENST00000460168 CTTNBP2NLQ9P2B4 639 aa10.94□□□□□ -0.66
HERC4-207ENST00000460168 ATXN2Q99700 1313 aaKnown RBP10.94□□□□□ -0.66
HERC4-207ENST00000460168 SRGAP2O75044 1071 aa10.94□□□□□ -0.66
HERC4-207ENST00000460168 CD4P01730 458 aa10.94□□□□□ -0.66
HERC4-207ENST00000460168 ALOX15P16050 662 aaPredicted RBP10.94□□□□□ -0.66
HERC4-207ENST00000460168 IBSPP21815 317 aaPredicted RBP10.94□□□□□ -0.66
HERC4-207ENST00000460168 SSTR3P32745 418 aaPredicted RBP10.94□□□□□ -0.66
HERC4-207ENST00000460168 LIG3P49916 1009 aa10.94□□□□□ -0.66
HERC4-207ENST00000460168 CTAG1AP78358 180 aa10.94□□□□□ -0.66
HERC4-207ENST00000460168 PHEXP78562 749 aa10.94□□□□□ -0.66
HERC4-207ENST00000460168 CUL3Q13618 768 aa10.94□□□□□ -0.66
HERC4-207ENST00000460168 LPIN1Q14693 890 aa10.94□□□□□ -0.66
HERC4-207ENST00000460168 NAA35Q5VZE5 725 aa10.94□□□□□ -0.66
HERC4-207ENST00000460168 ACAD10Q6JQN1 1059 aa10.94□□□□□ -0.66
HERC4-207ENST00000460168 TRIM72Q6ZMU5 477 aa10.94□□□□□ -0.66
HERC4-207ENST00000460168 DAAM2Q86T65 1068 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms