RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 AK2P54819 239 aa4.06□□□□□ -1.76
VPS8-215ENST00000460158 RHBDL3P58872 404 aa4.06□□□□□ -1.76
VPS8-215ENST00000460158 HDAC1Q13547 482 aaPredicted RBP4.06□□□□□ -1.76
VPS8-215ENST00000460158 DAG1Q14118 895 aa4.06□□□□□ -1.76
VPS8-215ENST00000460158 HLXQ14774 488 aaPredicted RBP4.06□□□□□ -1.76
VPS8-215ENST00000460158 KLHDC7AQ5VTJ3 777 aa4.06□□□□□ -1.76
VPS8-215ENST00000460158 SP5Q6BEB4 398 aaPredicted RBP4.06□□□□□ -1.76
VPS8-215ENST00000460158 KCNV1Q6PIU1 500 aa4.06□□□□□ -1.76
VPS8-215ENST00000460158 ZDHHC24Q6UX98 284 aa4.06□□□□□ -1.76
VPS8-215ENST00000460158 TMEM108Q6UXF1 575 aa4.06□□□□□ -1.76
VPS8-215ENST00000460158 KRBA2Q6ZNG9 492 aa4.06□□□□□ -1.76
VPS8-215ENST00000460158 MICALCLQ6ZW33 695 aa4.06□□□□□ -1.76
VPS8-215ENST00000460158 GPR149Q86SP6 731 aa4.06□□□□□ -1.76
VPS8-215ENST00000460158 SRLQ86TD4 932 aa4.06□□□□□ -1.76
VPS8-215ENST00000460158 ZNF280BQ86YH2 543 aa4.06□□□□□ -1.76
VPS8-215ENST00000460158 ARHGEF19Q8IW93 802 aa4.06□□□□□ -1.76
VPS8-215ENST00000460158 COLGALT2Q8IYK4 626 aa4.06□□□□□ -1.76
VPS8-215ENST00000460158 PROKR1Q8TCW9 393 aa4.06□□□□□ -1.76
VPS8-215ENST00000460158 ASB10Q8WXI3 467 aa4.06□□□□□ -1.76
VPS8-215ENST00000460158 SNX19Q92543 992 aa4.06□□□□□ -1.76
VPS8-215ENST00000460158 FUBP1Q96AE4 644 aaKnown RBP4.06□□□□□ -1.76
VPS8-215ENST00000460158 MOGAT1Q96PD6 335 aa4.06□□□□□ -1.76
VPS8-215ENST00000460158 RPS6KC1Q96S38 1066 aa4.06□□□□□ -1.76
VPS8-215ENST00000460158 MESP1Q9BRJ9 268 aa4.06□□□□□ -1.76
VPS8-215ENST00000460158 STK31Q9BXU1 1019 aa4.06□□□□□ -1.76
VPS8-215ENST00000460158 PNPLA8Q9NP80 782 aa4.06□□□□□ -1.76
VPS8-215ENST00000460158 COMMD10Q9Y6G5 202 aa4.06□□□□□ -1.76
VPS8-215ENST00000460158 SPATA31A3Q5VYP0 1347 aa4.05□□□□□ -1.76
VPS8-215ENST00000460158 A0A0B4J269 797 aa4.05□□□□□ -1.76
VPS8-215ENST00000460158 MBD3L4A6NDZ8 208 aaPredicted RBP4.05□□□□□ -1.76
VPS8-215ENST00000460158 MBD3L3A6NE82 208 aaPredicted RBP4.05□□□□□ -1.76
VPS8-215ENST00000460158 NCK2O43639 380 aa4.05□□□□□ -1.76
VPS8-215ENST00000460158 NARSO43776 548 aaKnown RBP4.05□□□□□ -1.76
VPS8-215ENST00000460158 SOAT2O75908 522 aa4.05□□□□□ -1.76
VPS8-215ENST00000460158 IL18RAPO95256 599 aa4.05□□□□□ -1.76
VPS8-215ENST00000460158 PARP1P09874 1014 aaKnown RBP4.05□□□□□ -1.76
VPS8-215ENST00000460158 CYP2C9P11712 490 aa4.05□□□□□ -1.76
VPS8-215ENST00000460158 XRCC6P12956 609 aaKnown RBP eCLIP4.05□□□□□ -1.76
VPS8-215ENST00000460158 TSHRP16473 764 aa4.05□□□□□ -1.76
VPS8-215ENST00000460158 ITGALP20701 1170 aa4.05□□□□□ -1.76
VPS8-215ENST00000460158 KLRC1P26715 233 aa4.05□□□□□ -1.76
VPS8-215ENST00000460158 STT3AP46977 705 aa4.05□□□□□ -1.76
VPS8-215ENST00000460158 PXNP49023 591 aaPredicted RBP4.05□□□□□ -1.76
VPS8-215ENST00000460158 WNT3P56703 355 aa4.05□□□□□ -1.76
VPS8-215ENST00000460158 LOXL3P58215 753 aa4.05□□□□□ -1.76
VPS8-215ENST00000460158 HTRA4P83105 476 aaPredicted RBP4.05□□□□□ -1.76
VPS8-215ENST00000460158 TUBB3Q13509 450 aa4.05□□□□□ -1.76
VPS8-215ENST00000460158 ZIK1Q3SY52 487 aaPredicted RBP4.05□□□□□ -1.76
VPS8-215ENST00000460158 C4orf46Q504U0 113 aa4.05□□□□□ -1.76
VPS8-215ENST00000460158 PLA1AQ53H76 456 aa4.05□□□□□ -1.76
VPS8-215ENST00000460158 LY6G5CQ5SRR4 150 aa4.05□□□□□ -1.76
VPS8-215ENST00000460158 RBM20Q5T481 1227 aaKnown RBP4.05□□□□□ -1.76
VPS8-215ENST00000460158 VPS53Q5VIR6 699 aa4.05□□□□□ -1.76
VPS8-215ENST00000460158 LAYNQ6UX15 382 aa4.05□□□□□ -1.76
VPS8-215ENST00000460158 UNC13DQ70J99 1090 aa4.05□□□□□ -1.76
VPS8-215ENST00000460158 GAS2L3Q86XJ1 694 aa4.05□□□□□ -1.76
VPS8-215ENST00000460158 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.05□□□□□ -1.76
VPS8-215ENST00000460158 CCDC33Q8N5R6 958 aa4.05□□□□□ -1.76
VPS8-215ENST00000460158 RNF152Q8N8N0 203 aa4.05□□□□□ -1.76
VPS8-215ENST00000460158 SLC30A5Q8TAD4 765 aa4.05□□□□□ -1.76
VPS8-215ENST00000460158 SPSB4Q96A44 273 aa4.05□□□□□ -1.76
VPS8-215ENST00000460158 PTCD3Q96EY7 689 aaKnown RBP4.05□□□□□ -1.76
VPS8-215ENST00000460158 TNIP3Q96KP6 325 aa4.05□□□□□ -1.76
VPS8-215ENST00000460158 CCDC138Q96M89 665 aa4.05□□□□□ -1.76
VPS8-215ENST00000460158 RIPOR3Q96MK2 946 aa4.05□□□□□ -1.76
VPS8-215ENST00000460158 MPHOSPH6Q99547 160 aaKnown RBP4.05□□□□□ -1.76
VPS8-215ENST00000460158 MYD88Q99836 296 aa4.05□□□□□ -1.76
VPS8-215ENST00000460158 ELAC2Q9BQ52 826 aaKnown RBP4.05□□□□□ -1.76
VPS8-215ENST00000460158 BRIP1Q9BX63 1249 aa4.05□□□□□ -1.76
VPS8-215ENST00000460158 WDR11Q9BZH6 1224 aa4.05□□□□□ -1.76
VPS8-215ENST00000460158 MAF1Q9H063 256 aa4.05□□□□□ -1.76
VPS8-215ENST00000460158 CHST8Q9H2A9 424 aa4.05□□□□□ -1.76
VPS8-215ENST00000460158 SERHL2Q9H4I8 314 aa4.05□□□□□ -1.76
VPS8-215ENST00000460158 INTS13Q9NVM9 706 aa4.05□□□□□ -1.76
VPS8-215ENST00000460158 ITGB1BP2Q9UKP3 347 aa4.05□□□□□ -1.76
VPS8-215ENST00000460158 PIPSLA2A3N6 862 aa4.04□□□□□ -1.76
VPS8-215ENST00000460158 RASA4BC9J798 803 aa4.04□□□□□ -1.76
VPS8-215ENST00000460158 hCG_1984214I3L0E3 225 aa4.04□□□□□ -1.76
VPS8-215ENST00000460158 RASA4O43374 803 aa4.04□□□□□ -1.76
VPS8-215ENST00000460158 RASSF9O75901 435 aa4.04□□□□□ -1.76
VPS8-215ENST00000460158 MT-ND5P03915 603 aa4.04□□□□□ -1.76
VPS8-215ENST00000460158 EGR2P11161 476 aaPredicted RBP4.04□□□□□ -1.76
VPS8-215ENST00000460158 ITGAMP11215 1152 aa4.04□□□□□ -1.76
VPS8-215ENST00000460158 PPP3CBP16298 524 aa4.04□□□□□ -1.76
VPS8-215ENST00000460158 TNFSF4P23510 183 aa4.04□□□□□ -1.76
VPS8-215ENST00000460158 SERPINB3P29508 390 aa4.04□□□□□ -1.76
VPS8-215ENST00000460158 CD6P30203 668 aa4.04□□□□□ -1.76
VPS8-215ENST00000460158 HNRNPMP52272 730 aaKnown RBP eCLIP4.04□□□□□ -1.76
VPS8-215ENST00000460158 SF3B3Q15393 1217 aaKnown RBP4.04□□□□□ -1.76
VPS8-215ENST00000460158 FAM209BQ5JX69 171 aa4.04□□□□□ -1.76
VPS8-215ENST00000460158 DPP9Q86TI2 863 aa4.04□□□□□ -1.76
VPS8-215ENST00000460158 ZNF575Q86XF7 245 aa4.04□□□□□ -1.76
VPS8-215ENST00000460158 SSH3Q8TE77 659 aa4.04□□□□□ -1.76
VPS8-215ENST00000460158 LPIN2Q92539 896 aa4.04□□□□□ -1.76
VPS8-215ENST00000460158 GJA10Q969M2 543 aa4.04□□□□□ -1.76
VPS8-215ENST00000460158 SNX22Q96L94 193 aa4.04□□□□□ -1.76
VPS8-215ENST00000460158 AMBRA1Q9C0C7 1298 aa4.04□□□□□ -1.76
VPS8-215ENST00000460158 GJB4Q9NTQ9 266 aa4.04□□□□□ -1.76
VPS8-215ENST00000460158 TBCCD1Q9NVR7 557 aa4.04□□□□□ -1.76
VPS8-215ENST00000460158 TESQ9UGI8 421 aaKnown RBP4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms