RNA–Protein interactions for RNA: ENST00000460002.1

PCOLCE-202, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 3

Gene PCOLCE, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-202ENST00000460002 USP4Q13107 963 aa14.68□□□□□ -0.06
PCOLCE-202ENST00000460002 NR1H3Q13133 447 aa14.68□□□□□ -0.06
PCOLCE-202ENST00000460002 HSF5Q4G112 596 aaPredicted RBP14.68□□□□□ -0.06
PCOLCE-202ENST00000460002 PREPLQ4J6C6 727 aaPredicted RBP14.68□□□□□ -0.06
PCOLCE-202ENST00000460002 PKDCCQ504Y2 493 aa14.68□□□□□ -0.06
PCOLCE-202ENST00000460002 ATF7IP2Q5U623 682 aa14.68□□□□□ -0.06
PCOLCE-202ENST00000460002 PRICKLE2Q7Z3G6 844 aa14.68□□□□□ -0.06
PCOLCE-202ENST00000460002 MON1AQ86VX9 555 aa14.68□□□□□ -0.06
PCOLCE-202ENST00000460002 TMPRSS12Q86WS5 348 aa14.68□□□□□ -0.06
PCOLCE-202ENST00000460002 SPIRE2Q8WWL2 714 aa14.68□□□□□ -0.06
PCOLCE-202ENST00000460002 ZNF419Q96HQ0 510 aaPredicted RBP14.68□□□□□ -0.06
PCOLCE-202ENST00000460002 ACAP3Q96P50 834 aa14.68□□□□□ -0.06
PCOLCE-202ENST00000460002 C22orf23Q9BZE7 217 aa14.68□□□□□ -0.06
PCOLCE-202ENST00000460002 ANKMY1Q9P2S6 941 aa14.68□□□□□ -0.06
PCOLCE-202ENST00000460002 HSFX1Q9UBD0 423 aa14.68□□□□□ -0.06
PCOLCE-202ENST00000460002 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.68□□□□□ -0.06
PCOLCE-202ENST00000460002 AK5Q9Y6K8 562 aa14.68□□□□□ -0.06
PCOLCE-202ENST00000460002 DOPEY2Q9Y3R5 2298 aa14.68□□□□□ -0.06
PCOLCE-202ENST00000460002 TNFSF14O43557 240 aa14.67□□□□□ -0.06
PCOLCE-202ENST00000460002 LYPLA2O95372 231 aa14.67□□□□□ -0.06
PCOLCE-202ENST00000460002 GNSP15586 552 aa14.67□□□□□ -0.06
PCOLCE-202ENST00000460002 HMGA1P17096 107 aaKnown RBP14.67□□□□□ -0.06
PCOLCE-202ENST00000460002 NLRP5P59047 1200 aa14.67□□□□□ -0.06
PCOLCE-202ENST00000460002 BNC1Q01954 994 aa14.67□□□□□ -0.06
PCOLCE-202ENST00000460002 FAM160A1Q05DH4 1040 aa14.67□□□□□ -0.06
PCOLCE-202ENST00000460002 MYBPC2Q14324 1141 aa14.67□□□□□ -0.06
PCOLCE-202ENST00000460002 MGAT5BQ3V5L5 792 aa14.67□□□□□ -0.06
PCOLCE-202ENST00000460002 C6orf118Q5T5N4 469 aa14.67□□□□□ -0.06
PCOLCE-202ENST00000460002 POTEDQ86YR6 584 aa14.67□□□□□ -0.06
PCOLCE-202ENST00000460002 TTC9Q92623 222 aa14.67□□□□□ -0.06
PCOLCE-202ENST00000460002 SLC22A12Q96S37 553 aa14.67□□□□□ -0.06
PCOLCE-202ENST00000460002 CCDC94Q9BW85 323 aaPredicted RBP14.67□□□□□ -0.06
PCOLCE-202ENST00000460002 KCNK4Q9NYG8 393 aa14.67□□□□□ -0.06
PCOLCE-202ENST00000460002 CNTN3Q9P232 1028 aa14.67□□□□□ -0.06
PCOLCE-202ENST00000460002 M0R2N6 131 aa14.66□□□□□ -0.06
PCOLCE-202ENST00000460002 ADSSP30520 456 aa14.66□□□□□ -0.06
PCOLCE-202ENST00000460002 HSPA4P34932 840 aa14.66□□□□□ -0.06
PCOLCE-202ENST00000460002 SLC6A11P48066 632 aa14.66□□□□□ -0.06
PCOLCE-202ENST00000460002 TUFMP49411 452 aaKnown RBP14.66□□□□□ -0.06
PCOLCE-202ENST00000460002 RCAN1P53805 252 aa14.66□□□□□ -0.06
PCOLCE-202ENST00000460002 EXOSC10Q01780 885 aaKnown RBP14.66□□□□□ -0.06
PCOLCE-202ENST00000460002 KCNH2Q12809 1159 aa14.66□□□□□ -0.06
PCOLCE-202ENST00000460002 RTP5Q14D33 572 aa14.66□□□□□ -0.06
PCOLCE-202ENST00000460002 TAF12Q16514 161 aa14.66□□□□□ -0.06
PCOLCE-202ENST00000460002 INF2Q27J81 1249 aa14.66□□□□□ -0.06
PCOLCE-202ENST00000460002 CREB3L3Q68CJ9 461 aa14.66□□□□□ -0.06
PCOLCE-202ENST00000460002 USP37Q86T82 979 aa14.66□□□□□ -0.06
PCOLCE-202ENST00000460002 PIGOQ8TEQ8 1089 aa14.66□□□□□ -0.06
PCOLCE-202ENST00000460002 FGF11Q92914 225 aa14.66□□□□□ -0.06
PCOLCE-202ENST00000460002 CCDC43Q96MW1 224 aaKnown RBP14.66□□□□□ -0.06
PCOLCE-202ENST00000460002 EIF2AK1Q9BQI3 630 aaKnown RBP14.66□□□□□ -0.06
PCOLCE-202ENST00000460002 KIFC3Q9BVG8 833 aa14.66□□□□□ -0.06
PCOLCE-202ENST00000460002 CDT1Q9H211 546 aa14.66□□□□□ -0.06
PCOLCE-202ENST00000460002 CD93Q9NPY3 652 aa14.66□□□□□ -0.06
PCOLCE-202ENST00000460002 TUBGCP4Q9UGJ1 667 aa14.66□□□□□ -0.06
PCOLCE-202ENST00000460002 NAP1L2Q9ULW6 460 aaPredicted RBP14.66□□□□□ -0.06
PCOLCE-202ENST00000460002 CYP8B1Q9UNU6 501 aa14.66□□□□□ -0.06
PCOLCE-202ENST00000460002 PCDHGB2Q9Y5G2 931 aa14.66□□□□□ -0.06
PCOLCE-202ENST00000460002 SPTAN1Q13813 2472 aaKnown RBP14.66□□□□□ -0.06
PCOLCE-202ENST00000460002 CER1O95813 267 aa14.65□□□□□ -0.06
PCOLCE-202ENST00000460002 GP1BBP13224 206 aa14.65□□□□□ -0.06
PCOLCE-202ENST00000460002 MATKP42679 507 aa14.65□□□□□ -0.06
PCOLCE-202ENST00000460002 AARSP49588 968 aaKnown RBP eCLIP14.65□□□□□ -0.06
PCOLCE-202ENST00000460002 HLA-BQ31612 363 aa14.65□□□□□ -0.06
PCOLCE-202ENST00000460002 SYCP2LQ5T4T6 812 aa14.65□□□□□ -0.06
PCOLCE-202ENST00000460002 OVOS1Q6IE37 1185 aa14.65□□□□□ -0.06
PCOLCE-202ENST00000460002 STKLD1Q8NE28 680 aa14.65□□□□□ -0.06
PCOLCE-202ENST00000460002 OR10T2Q8NGX3 314 aa14.65□□□□□ -0.06
PCOLCE-202ENST00000460002 SPATA18Q8TC71 538 aa14.65□□□□□ -0.06
PCOLCE-202ENST00000460002 MRPS31Q92665 395 aaKnown RBP14.65□□□□□ -0.06
PCOLCE-202ENST00000460002 MED8Q96G25 268 aa14.65□□□□□ -0.06
PCOLCE-202ENST00000460002 TMEM176AQ96HP8 235 aa14.65□□□□□ -0.06
PCOLCE-202ENST00000460002 YTHDC1Q96MU7 727 aaKnown RBP14.65□□□□□ -0.06
PCOLCE-202ENST00000460002 CYP2S1Q96SQ9 504 aa14.65□□□□□ -0.06
PCOLCE-202ENST00000460002 HSD17B14Q9BPX1 270 aa14.65□□□□□ -0.06
PCOLCE-202ENST00000460002 PCDHA4Q9UN74 947 aa14.65□□□□□ -0.06
PCOLCE-202ENST00000460002 A0A1B0GTW7 788 aa14.64□□□□□ -0.07
PCOLCE-202ENST00000460002 TADA3O75528 432 aa14.64□□□□□ -0.07
PCOLCE-202ENST00000460002 KAT7O95251 611 aa14.64□□□□□ -0.07
PCOLCE-202ENST00000460002 NFATC1O95644 943 aa14.64□□□□□ -0.07
PCOLCE-202ENST00000460002 JUPP14923 745 aa14.64□□□□□ -0.07
PCOLCE-202ENST00000460002 DMP1Q13316 513 aaPredicted RBP14.64□□□□□ -0.07
PCOLCE-202ENST00000460002 ARHGAP40Q5TG30 622 aa14.64□□□□□ -0.07
PCOLCE-202ENST00000460002 ZCCHC9Q8N567 271 aaKnown RBP14.64□□□□□ -0.07
PCOLCE-202ENST00000460002 ZNF513Q8N8E2 541 aaPredicted RBP14.64□□□□□ -0.07
PCOLCE-202ENST00000460002 DEPTORQ8TB45 409 aa14.64□□□□□ -0.07
PCOLCE-202ENST00000460002 NRSN2Q9GZP1 204 aa14.64□□□□□ -0.07
PCOLCE-202ENST00000460002 LSG1Q9H089 658 aaKnown RBP14.64□□□□□ -0.07
PCOLCE-202ENST00000460002 CPNE5Q9HCH3 593 aa14.64□□□□□ -0.07
PCOLCE-202ENST00000460002 GMIPQ9P107 970 aa14.64□□□□□ -0.07
PCOLCE-202ENST00000460002 TNFSF13BQ9Y275 285 aa14.64□□□□□ -0.07
PCOLCE-202ENST00000460002 DENND4CQ5VZ89 1909 aa14.63□□□□□ -0.07
PCOLCE-202ENST00000460002 CCDC196A0A1B0GTZ2 297 aa14.63□□□□□ -0.07
PCOLCE-202ENST00000460002 AKAP17AQ02040 695 aaKnown RBP14.63□□□□□ -0.07
PCOLCE-202ENST00000460002 NECTIN1Q15223 517 aa14.63□□□□□ -0.07
PCOLCE-202ENST00000460002 NPY5RQ15761 445 aa14.63□□□□□ -0.07
PCOLCE-202ENST00000460002 SLC39A12Q504Y0 691 aa14.63□□□□□ -0.07
PCOLCE-202ENST00000460002 ZC2HC1CQ53FD0 456 aaPredicted RBP14.63□□□□□ -0.07
PCOLCE-202ENST00000460002 WDR45BQ5MNZ6 344 aa14.63□□□□□ -0.07
PCOLCE-202ENST00000460002 TTC22Q5TAA0 569 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms