RNA–Protein interactions for RNA: ENST00000458709.1

PRAMEF35P-201, Transcript of PRAME family member 35, pseudogene, humanhuman

BASIC

Gene PRAMEF35P, Length 891 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF35P-201ENST00000458709 C11orf74Q86VG3 221 aa12.18□□□□□ -0.46
PRAMEF35P-201ENST00000458709 RASSF3Q86WH2 238 aa12.18□□□□□ -0.46
PRAMEF35P-201ENST00000458709 KRI1Q8N9T8 703 aaKnown RBP12.18□□□□□ -0.46
PRAMEF35P-201ENST00000458709 MDGA1Q8NFP4 955 aa12.18□□□□□ -0.46
PRAMEF35P-201ENST00000458709 CD101Q93033 1021 aa12.18□□□□□ -0.46
PRAMEF35P-201ENST00000458709 SENP8Q96LD8 212 aa12.18□□□□□ -0.46
PRAMEF35P-201ENST00000458709 RUSC1Q9BVN2 902 aa12.18□□□□□ -0.46
PRAMEF35P-201ENST00000458709 CCSER1Q9C0I3 900 aa12.18□□□□□ -0.46
PRAMEF35P-201ENST00000458709 SLC32A1Q9H598 525 aa12.18□□□□□ -0.46
PRAMEF35P-201ENST00000458709 ECT2Q9H8V3 914 aa12.18□□□□□ -0.46
PRAMEF35P-201ENST00000458709 KIF9Q9HAQ2 790 aa12.18□□□□□ -0.46
PRAMEF35P-201ENST00000458709 DDX19AQ9NUU7 478 aaKnown RBP12.18□□□□□ -0.46
PRAMEF35P-201ENST00000458709 TDP1Q9NUW8 608 aa12.18□□□□□ -0.46
PRAMEF35P-201ENST00000458709 EVLQ9UI08 416 aaPredicted RBP12.18□□□□□ -0.46
PRAMEF35P-201ENST00000458709 UBQLN1Q9UMX0 589 aaKnown RBP12.18□□□□□ -0.46
PRAMEF35P-201ENST00000458709 KIAA1024Q9UPX6 916 aa12.18□□□□□ -0.46
PRAMEF35P-201ENST00000458709 GPSM3Q9Y4H4 160 aa12.18□□□□□ -0.46
PRAMEF35P-201ENST00000458709 ITPR1Q14643 2758 aa12.18□□□□□ -0.46
PRAMEF35P-201ENST00000458709 ATXN2Q99700 1313 aaKnown RBP12.17□□□□□ -0.46
PRAMEF35P-201ENST00000458709 MYO16Q9Y6X6 1858 aa12.17□□□□□ -0.46
PRAMEF35P-201ENST00000458709 ASCC3Q8N3C0 2202 aaKnown RBP12.17□□□□□ -0.46
PRAMEF35P-201ENST00000458709 SFI1A8K8P3 1242 aa12.17□□□□□ -0.46
PRAMEF35P-201ENST00000458709 E9PMD0 336 aa12.17□□□□□ -0.46
PRAMEF35P-201ENST00000458709 CUTAO60888 179 aa12.17□□□□□ -0.46
PRAMEF35P-201ENST00000458709 F11P03951 625 aa12.17□□□□□ -0.46
PRAMEF35P-201ENST00000458709 CAPNS1P04632 268 aa12.17□□□□□ -0.46
PRAMEF35P-201ENST00000458709 ODC1P11926 461 aa12.17□□□□□ -0.46
PRAMEF35P-201ENST00000458709 HMGA1P17096 107 aaKnown RBP12.17□□□□□ -0.46
PRAMEF35P-201ENST00000458709 ENGP17813 658 aa12.17□□□□□ -0.46
PRAMEF35P-201ENST00000458709 CYP3A5P20815 502 aa12.17□□□□□ -0.46
PRAMEF35P-201ENST00000458709 TUFMP49411 452 aaKnown RBP12.17□□□□□ -0.46
PRAMEF35P-201ENST00000458709 SEC13P55735 322 aa12.17□□□□□ -0.46
PRAMEF35P-201ENST00000458709 FAM193AP78312 1265 aa12.17□□□□□ -0.46
PRAMEF35P-201ENST00000458709 MCL1Q07820 350 aa12.17□□□□□ -0.46
PRAMEF35P-201ENST00000458709 MTF1Q14872 753 aa12.17□□□□□ -0.46
PRAMEF35P-201ENST00000458709 PDGFRLQ15198 375 aa12.17□□□□□ -0.46
PRAMEF35P-201ENST00000458709 PIP4P1Q86T03 277 aa12.17□□□□□ -0.46
PRAMEF35P-201ENST00000458709 PDZD3Q86UT5 571 aa12.17□□□□□ -0.46
PRAMEF35P-201ENST00000458709 CHCHD4Q8N4Q1 142 aa12.17□□□□□ -0.46
PRAMEF35P-201ENST00000458709 CPA6Q8N4T0 437 aa12.17□□□□□ -0.46
PRAMEF35P-201ENST00000458709 TTC16Q8NEE8 873 aa12.17□□□□□ -0.46
PRAMEF35P-201ENST00000458709 CNOT6LQ96LI5 555 aaKnown RBP12.17□□□□□ -0.46
PRAMEF35P-201ENST00000458709 ZCWPW1Q9H0M4 648 aa12.17□□□□□ -0.46
PRAMEF35P-201ENST00000458709 PLEKHA5Q9HAU0 1116 aa12.17□□□□□ -0.46
PRAMEF35P-201ENST00000458709 FSCN3Q9NQT6 498 aa12.17□□□□□ -0.46
PRAMEF35P-201ENST00000458709 TMEM74BQ9NUR3 256 aa12.17□□□□□ -0.46
PRAMEF35P-201ENST00000458709 WNT6Q9Y6F9 365 aa12.17□□□□□ -0.46
PRAMEF35P-201ENST00000458709 CACNA1EQ15878 2313 aa12.16□□□□□ -0.46
PRAMEF35P-201ENST00000458709 THADAQ6YHU6 1953 aa12.16□□□□□ -0.46
PRAMEF35P-201ENST00000458709 ADAMTS20P59510 1910 aa12.16□□□□□ -0.46
PRAMEF35P-201ENST00000458709 LACTBL1A8MY62 500 aa12.16□□□□□ -0.46
PRAMEF35P-201ENST00000458709 TADA3O75528 432 aa12.16□□□□□ -0.46
PRAMEF35P-201ENST00000458709 CLTAP09496 248 aa12.16□□□□□ -0.46
PRAMEF35P-201ENST00000458709 PTGER3P43115 390 aa12.16□□□□□ -0.46
PRAMEF35P-201ENST00000458709 GPR15P49685 360 aa12.16□□□□□ -0.46
PRAMEF35P-201ENST00000458709 LILRA4P59901 499 aa12.16□□□□□ -0.46
PRAMEF35P-201ENST00000458709 PPP2R3AQ06190 1150 aa12.16□□□□□ -0.46
PRAMEF35P-201ENST00000458709 LMAN2Q12907 356 aa12.16□□□□□ -0.46
PRAMEF35P-201ENST00000458709 STRN3Q13033 797 aa12.16□□□□□ -0.46
PRAMEF35P-201ENST00000458709 LRRTM3Q86VH5 581 aa12.16□□□□□ -0.46
PRAMEF35P-201ENST00000458709 TTC30AQ86WT1 665 aa12.16□□□□□ -0.46
PRAMEF35P-201ENST00000458709 FRMD1Q8N878 549 aa12.16□□□□□ -0.46
PRAMEF35P-201ENST00000458709 USP33Q8TEY7 942 aa12.16□□□□□ -0.46
PRAMEF35P-201ENST00000458709 RLN3Q8WXF3 142 aa12.16□□□□□ -0.46
PRAMEF35P-201ENST00000458709 DRC1Q96MC2 740 aa12.16□□□□□ -0.46
PRAMEF35P-201ENST00000458709 MMTAG2Q9BU76 263 aaKnown RBP12.16□□□□□ -0.46
PRAMEF35P-201ENST00000458709 NUSAP1Q9BXS6 441 aaKnown RBP12.16□□□□□ -0.46
PRAMEF35P-201ENST00000458709 DUS2Q9NX74 493 aaKnown RBP12.16□□□□□ -0.46
PRAMEF35P-201ENST00000458709 ABI2Q9NYB9 513 aaPredicted RBP12.16□□□□□ -0.46
PRAMEF35P-201ENST00000458709 ZMYM5Q9UJ78 669 aa12.16□□□□□ -0.46
PRAMEF35P-201ENST00000458709 HPSEQ9Y251 543 aa12.16□□□□□ -0.46
PRAMEF35P-201ENST00000458709 SMG1Q96Q15 3661 aaKnown RBP12.15□□□□□ -0.46
PRAMEF35P-201ENST00000458709 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.15□□□□□ -0.46
PRAMEF35P-201ENST00000458709 CLDN3O15551 220 aa12.15□□□□□ -0.46
PRAMEF35P-201ENST00000458709 HAPLN1P10915 354 aaPredicted RBP12.15□□□□□ -0.46
PRAMEF35P-201ENST00000458709 HNRNPLP14866 589 aaKnown RBP eCLIP12.15□□□□□ -0.46
PRAMEF35P-201ENST00000458709 CMA1P23946 247 aa12.15□□□□□ -0.46
PRAMEF35P-201ENST00000458709 DDX6P26196 483 aaKnown RBP eCLIP12.15□□□□□ -0.46
PRAMEF35P-201ENST00000458709 MATR3P43243 847 aaKnown RBP eCLIP12.15□□□□□ -0.46
PRAMEF35P-201ENST00000458709 USP4Q13107 963 aa12.15□□□□□ -0.46
PRAMEF35P-201ENST00000458709 SEMA3BQ13214 749 aa12.15□□□□□ -0.46
PRAMEF35P-201ENST00000458709 STK38Q15208 465 aa12.15□□□□□ -0.46
PRAMEF35P-201ENST00000458709 ZNF77Q15935 545 aa12.15□□□□□ -0.46
PRAMEF35P-201ENST00000458709 ENOX2Q16206 610 aaKnown RBP12.15□□□□□ -0.46
PRAMEF35P-201ENST00000458709 COL28A1Q2UY09 1125 aa12.15□□□□□ -0.46
PRAMEF35P-201ENST00000458709 EML3Q32P44 896 aa12.15□□□□□ -0.46
PRAMEF35P-201ENST00000458709 C2orf27AQ580R0 203 aa12.15□□□□□ -0.46
PRAMEF35P-201ENST00000458709 RESP18Q5W5W9 173 aa12.15□□□□□ -0.46
PRAMEF35P-201ENST00000458709 RINT1Q6NUQ1 792 aa12.15□□□□□ -0.46
PRAMEF35P-201ENST00000458709 MON1AQ86VX9 555 aa12.15□□□□□ -0.46
PRAMEF35P-201ENST00000458709 TMEFF1Q8IYR6 380 aa12.15□□□□□ -0.46
PRAMEF35P-201ENST00000458709 CCDC33Q8N5R6 958 aa12.15□□□□□ -0.46
PRAMEF35P-201ENST00000458709 TMEM161BQ8NDZ6 487 aa12.15□□□□□ -0.46
PRAMEF35P-201ENST00000458709 SNX29Q8TEQ0 813 aa12.15□□□□□ -0.46
PRAMEF35P-201ENST00000458709 OSCP1Q8WVF1 389 aa12.15□□□□□ -0.46
PRAMEF35P-201ENST00000458709 EXOC4Q96A65 974 aa12.15□□□□□ -0.46
PRAMEF35P-201ENST00000458709 SPATA32Q96LK8 384 aa12.15□□□□□ -0.46
PRAMEF35P-201ENST00000458709 FNBP1Q96RU3 617 aa12.15□□□□□ -0.46
PRAMEF35P-201ENST00000458709 SLC22A12Q96S37 553 aa12.15□□□□□ -0.46
PRAMEF35P-201ENST00000458709 TFIP11Q9UBB9 837 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms