RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 CFHP08603 1231 aa17.6■□□□□ 0.41
CCDC90B-202ENST00000455220 OR4Q2P0C623 313 aa17.6■□□□□ 0.41
CCDC90B-202ENST00000455220 SMARCB1Q12824 385 aa17.6■□□□□ 0.41
CCDC90B-202ENST00000455220 NFE2Q16621 373 aaPredicted RBP17.6■□□□□ 0.41
CCDC90B-202ENST00000455220 SLC39A12Q504Y0 691 aa17.6■□□□□ 0.41
CCDC90B-202ENST00000455220 PKDCCQ504Y2 493 aa17.6■□□□□ 0.41
CCDC90B-202ENST00000455220 TMC7Q7Z402 723 aa17.6■□□□□ 0.41
CCDC90B-202ENST00000455220 VPS36Q86VN1 386 aa17.6■□□□□ 0.41
CCDC90B-202ENST00000455220 GLYCTKQ8IVS8 523 aa17.6■□□□□ 0.41
CCDC90B-202ENST00000455220 CCDC42Q96M95 316 aa17.6■□□□□ 0.41
CCDC90B-202ENST00000455220 B3GNT5Q9BYG0 378 aa17.6■□□□□ 0.41
CCDC90B-202ENST00000455220 CERS4Q9HA82 394 aa17.6■□□□□ 0.41
CCDC90B-202ENST00000455220 NGRNQ9NPE2 291 aaKnown RBP17.6■□□□□ 0.41
CCDC90B-202ENST00000455220 TRANK1O15050 2925 aa17.59■□□□□ 0.41
CCDC90B-202ENST00000455220 DDX3XO00571 662 aaKnown RBP eCLIP17.59■□□□□ 0.412e-15■■■■■ 36.8
CCDC90B-202ENST00000455220 MICAL2O94851 1124 aa17.59■□□□□ 0.41
CCDC90B-202ENST00000455220 CYP1A1P04798 512 aaPredicted RBP17.59■□□□□ 0.41
CCDC90B-202ENST00000455220 RPL17P18621 184 aaKnown RBP17.59■□□□□ 0.41
CCDC90B-202ENST00000455220 TNFAIP3P21580 790 aa17.59■□□□□ 0.41
CCDC90B-202ENST00000455220 CDH5P33151 784 aaPredicted RBP17.59■□□□□ 0.41
CCDC90B-202ENST00000455220 ROR1Q01973 937 aa17.59■□□□□ 0.41
CCDC90B-202ENST00000455220 SMC1AQ14683 1233 aaKnown RBP17.59■□□□□ 0.41
CCDC90B-202ENST00000455220 GOLGA7BQ2TAP0 167 aa17.59■□□□□ 0.41
CCDC90B-202ENST00000455220 CFAP221Q4G0U5 840 aa17.59■□□□□ 0.41
CCDC90B-202ENST00000455220 PDE12Q6L8Q7 609 aaKnown RBP17.59■□□□□ 0.41
CCDC90B-202ENST00000455220 RAD9BQ6WBX8 426 aa17.59■□□□□ 0.41
CCDC90B-202ENST00000455220 TRIM72Q6ZMU5 477 aa17.59■□□□□ 0.41
CCDC90B-202ENST00000455220 C4orf50Q6ZRC1 276 aa17.59■□□□□ 0.41
CCDC90B-202ENST00000455220 FAM35AQ86V20 835 aa17.59■□□□□ 0.41
CCDC90B-202ENST00000455220 ANKRD52Q8NB46 1076 aa17.59■□□□□ 0.41
CCDC90B-202ENST00000455220 ARNTL2Q8WYA1 636 aa17.59■□□□□ 0.41
CCDC90B-202ENST00000455220 FUBP3Q96I24 572 aaKnown RBP eCLIP17.59■□□□□ 0.41
CCDC90B-202ENST00000455220 PCDHB18PQ96TA0 734 aa17.59■□□□□ 0.41
CCDC90B-202ENST00000455220 LMAN2LQ9H0V9 348 aa17.59■□□□□ 0.41
CCDC90B-202ENST00000455220 LHX5Q9H2C1 402 aa17.59■□□□□ 0.41
CCDC90B-202ENST00000455220 ENTPD7Q9NQZ7 604 aa17.59■□□□□ 0.41
CCDC90B-202ENST00000455220 ADAMTS1Q9UHI8 967 aa17.59■□□□□ 0.41
CCDC90B-202ENST00000455220 NENFQ9UMX5 172 aa17.59■□□□□ 0.41
CCDC90B-202ENST00000455220 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.58■□□□□ 0.41
CCDC90B-202ENST00000455220 WDR27A2RRH5 827 aa17.58■□□□□ 0.41
CCDC90B-202ENST00000455220 EPOPA6NHQ4 379 aa17.58■□□□□ 0.41
CCDC90B-202ENST00000455220 TEX28O15482 410 aa17.58■□□□□ 0.41
CCDC90B-202ENST00000455220 ARHGAP6O43182 974 aa17.58■□□□□ 0.41
CCDC90B-202ENST00000455220 NRDCO43847 1150 aa17.58■□□□□ 0.41
CCDC90B-202ENST00000455220 CXCL14O95715 111 aa17.58■□□□□ 0.41
CCDC90B-202ENST00000455220 LSM8O95777 96 aaKnown RBP17.58■□□□□ 0.41
CCDC90B-202ENST00000455220 CPB1P15086 417 aa17.58■□□□□ 0.41
CCDC90B-202ENST00000455220 OR1D2P34982 312 aa17.58■□□□□ 0.41
CCDC90B-202ENST00000455220 NDUFV1P49821 464 aa17.58■□□□□ 0.41
CCDC90B-202ENST00000455220 KIF11P52732 1056 aa17.58■□□□□ 0.41
CCDC90B-202ENST00000455220 RAB33AQ14088 237 aa17.58■□□□□ 0.41
CCDC90B-202ENST00000455220 SLC18A3Q16572 532 aa17.58■□□□□ 0.41
CCDC90B-202ENST00000455220 TTC30AQ86WT1 665 aa17.58■□□□□ 0.41
CCDC90B-202ENST00000455220 PALB2Q86YC2 1186 aa17.58■□□□□ 0.41
CCDC90B-202ENST00000455220 MRPL43Q8N983 215 aaKnown RBP17.58■□□□□ 0.41
CCDC90B-202ENST00000455220 C2orf15Q8WU43 125 aaKnown RBP17.58■□□□□ 0.41
CCDC90B-202ENST00000455220 DEF6Q9H4E7 631 aa17.58■□□□□ 0.41
CCDC90B-202ENST00000455220 MYO7AQ13402 2215 aa17.58■□□□□ 0.4
CCDC90B-202ENST00000455220 A0A087X0T9 212 aa17.57■□□□□ 0.4
CCDC90B-202ENST00000455220 MTMR11A4FU01 709 aa17.57■□□□□ 0.4
CCDC90B-202ENST00000455220 C2orf71A6NGG8 1288 aa17.57■□□□□ 0.4
CCDC90B-202ENST00000455220 M0QYV0 167 aa17.57■□□□□ 0.4
CCDC90B-202ENST00000455220 CLDN5O00501 218 aa17.57■□□□□ 0.4
CCDC90B-202ENST00000455220 ABLIM3O94929 683 aa17.57■□□□□ 0.4
CCDC90B-202ENST00000455220 LCA5LO95447 670 aa17.57■□□□□ 0.4
CCDC90B-202ENST00000455220 VNN2O95498 520 aa17.57■□□□□ 0.4
CCDC90B-202ENST00000455220 CNPP09543 421 aaKnown RBP17.57■□□□□ 0.4
CCDC90B-202ENST00000455220 FAM228BP0C875 321 aa17.57■□□□□ 0.4
CCDC90B-202ENST00000455220 UNGP13051 313 aaPredicted RBP17.57■□□□□ 0.4
CCDC90B-202ENST00000455220 ADORA2BP29275 332 aa17.57■□□□□ 0.4
CCDC90B-202ENST00000455220 IRS1P35568 1242 aa17.57■□□□□ 0.4
CCDC90B-202ENST00000455220 CYLC1P35663 651 aaPredicted RBP17.57■□□□□ 0.4
CCDC90B-202ENST00000455220 BCAT1P54687 386 aa17.57■□□□□ 0.4
CCDC90B-202ENST00000455220 NOMO3P69849 1222 aa17.57■□□□□ 0.4
CCDC90B-202ENST00000455220 CYP27A1Q02318 531 aa17.57■□□□□ 0.4
CCDC90B-202ENST00000455220 PLPP4Q5VZY2 271 aa17.57■□□□□ 0.4
CCDC90B-202ENST00000455220 DENND1BQ6P3S1 775 aa17.57■□□□□ 0.4
CCDC90B-202ENST00000455220 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.57■□□□□ 0.4
CCDC90B-202ENST00000455220 ZNF518BQ9C0D4 1074 aa17.57■□□□□ 0.4
CCDC90B-202ENST00000455220 ABCB6Q9NP58 842 aa17.57■□□□□ 0.4
CCDC90B-202ENST00000455220 HESX1Q9UBX0 185 aa17.57■□□□□ 0.4
CCDC90B-202ENST00000455220 PCDHB5Q9Y5E4 795 aa17.57■□□□□ 0.4
CCDC90B-202ENST00000455220 COL4A4P53420 1690 aaPredicted RBP17.57■□□□□ 0.4
CCDC90B-202ENST00000455220 ATP8B3O60423 1300 aa17.57■□□□□ 0.4
CCDC90B-202ENST00000455220 ATG2AQ2TAZ0 1938 aa17.57■□□□□ 0.4
CCDC90B-202ENST00000455220 MYO9BQ13459 2157 aa17.57■□□□□ 0.4
CCDC90B-202ENST00000455220 TMEM265A0A087WTH1 108 aa17.57■□□□□ 0.4
CCDC90B-202ENST00000455220 HIDE1A8MVS5 230 aa17.57■□□□□ 0.4
CCDC90B-202ENST00000455220 AKR1B10O60218 316 aa17.57■□□□□ 0.4
CCDC90B-202ENST00000455220 GZMAP12544 262 aa17.57■□□□□ 0.4
CCDC90B-202ENST00000455220 SSTR3P32745 418 aaPredicted RBP17.57■□□□□ 0.4
CCDC90B-202ENST00000455220 GPD2P43304 727 aa17.57■□□□□ 0.4
CCDC90B-202ENST00000455220 ARPP19P56211 112 aa17.57■□□□□ 0.4
CCDC90B-202ENST00000455220 MTF1Q14872 753 aa17.57■□□□□ 0.4
CCDC90B-202ENST00000455220 CLEC16AQ2KHT3 1053 aa17.57■□□□□ 0.4
CCDC90B-202ENST00000455220 TPGS2Q68CL5 300 aa17.57■□□□□ 0.4
CCDC90B-202ENST00000455220 RNF19BQ6ZMZ0 732 aa17.57■□□□□ 0.4
CCDC90B-202ENST00000455220 SPATA2LQ8IUW3 424 aaPredicted RBP17.57■□□□□ 0.4
CCDC90B-202ENST00000455220 PASD1Q8IV76 773 aa17.57■□□□□ 0.4
CCDC90B-202ENST00000455220 WDTC1Q8N5D0 677 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms