RNA–Protein interactions for RNA: ENST00000454269.5

HCG18-240, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 2,430 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-240ENST00000454269 TSPY3P0CV98 308 aa9.2□□□□□ -0.94
HCG18-240ENST00000454269 TSPY8P0CW00 308 aa9.2□□□□□ -0.94
HCG18-240ENST00000454269 ITGA2P17301 1181 aa9.2□□□□□ -0.94
HCG18-240ENST00000454269 CYP3A7P24462 503 aa9.2□□□□□ -0.94
HCG18-240ENST00000454269 MAGEA11P43364 429 aa9.2□□□□□ -0.94
HCG18-240ENST00000454269 GDI2P50395 445 aaKnown RBP9.2□□□□□ -0.94
HCG18-240ENST00000454269 NKX2-5P52952 324 aaPredicted RBP9.2□□□□□ -0.94
HCG18-240ENST00000454269 HADHBP55084 474 aaKnown RBP9.2□□□□□ -0.94
HCG18-240ENST00000454269 TSPY1Q01534 308 aa9.2□□□□□ -0.94
HCG18-240ENST00000454269 RTP2Q5QGT7 225 aa9.2□□□□□ -0.94
HCG18-240ENST00000454269 SNAP47Q5SQN1 464 aa9.2□□□□□ -0.94
HCG18-240ENST00000454269 DCLRE1AQ6PJP8 1040 aa9.2□□□□□ -0.94
HCG18-240ENST00000454269 LARP1Q6PKG0 1096 aaKnown RBP9.2□□□□□ -0.94
HCG18-240ENST00000454269 STX12Q86Y82 276 aa9.2□□□□□ -0.94
HCG18-240ENST00000454269 CCDC36Q8IYA8 594 aa9.2□□□□□ -0.94
HCG18-240ENST00000454269 ZNF540Q8NDQ6 660 aa9.2□□□□□ -0.94
HCG18-240ENST00000454269 ZNF184Q99676 751 aaPredicted RBP9.2□□□□□ -0.94
HCG18-240ENST00000454269 DDX23Q9BUQ8 820 aaKnown RBP9.2□□□□□ -0.94
HCG18-240ENST00000454269 LY9Q9HBG7 655 aa9.2□□□□□ -0.94
HCG18-240ENST00000454269 USP40Q9NVE5 1235 aa9.2□□□□□ -0.94
HCG18-240ENST00000454269 FAM8A1Q9UBU6 413 aa9.2□□□□□ -0.94
HCG18-240ENST00000454269 CPSF3Q9UKF6 684 aaKnown RBP9.2□□□□□ -0.94
HCG18-240ENST00000454269 ZMIZ1Q9ULJ6 1067 aa9.2□□□□□ -0.94
HCG18-240ENST00000454269 DUSP12Q9UNI6 340 aa9.2□□□□□ -0.94
HCG18-240ENST00000454269 UTP11Q9Y3A2 253 aaKnown RBP9.2□□□□□ -0.94
HCG18-240ENST00000454269 SPATA31A5Q5VU36 1347 aa9.2□□□□□ -0.94
HCG18-240ENST00000454269 SPATA31A7Q8IWB4 1347 aa9.2□□□□□ -0.94
HCG18-240ENST00000454269 USP6P35125 1406 aa9.2□□□□□ -0.94
HCG18-240ENST00000454269 H0Y858 1186 aa9.2□□□□□ -0.94
HCG18-240ENST00000454269 hCG_2039718K7EN88 272 aa9.2□□□□□ -0.94
HCG18-240ENST00000454269 TRMUO75648 421 aaKnown RBP9.2□□□□□ -0.94
HCG18-240ENST00000454269 ESRRBO95718 433 aa9.2□□□□□ -0.94
HCG18-240ENST00000454269 GAS8O95995 478 aa9.2□□□□□ -0.94
HCG18-240ENST00000454269 FAM228BP0C875 321 aa9.2□□□□□ -0.94
HCG18-240ENST00000454269 PCSK2P16519 638 aa9.2□□□□□ -0.94
HCG18-240ENST00000454269 CYP3A5P20815 502 aa9.2□□□□□ -0.94
HCG18-240ENST00000454269 SHMT1P34896 483 aa9.2□□□□□ -0.94
HCG18-240ENST00000454269 ST13P50502 369 aaKnown RBP9.2□□□□□ -0.94
HCG18-240ENST00000454269 VAV2P52735 878 aa9.2□□□□□ -0.94
HCG18-240ENST00000454269 GRSF1Q12849 480 aaKnown RBP eCLIP9.2□□□□□ -0.94
HCG18-240ENST00000454269 TBX2Q13207 712 aaPredicted RBP9.2□□□□□ -0.94
HCG18-240ENST00000454269 CLUL1Q15846 466 aa9.2□□□□□ -0.94
HCG18-240ENST00000454269 SGCAQ16586 387 aa9.2□□□□□ -0.94
HCG18-240ENST00000454269 GRAMD1BQ3KR37 738 aa9.2□□□□□ -0.94
HCG18-240ENST00000454269 DUPD1Q68J44 220 aa9.2□□□□□ -0.94
HCG18-240ENST00000454269 GTF2IRD2BQ6EKJ0 949 aa9.2□□□□□ -0.94
HCG18-240ENST00000454269 TMTC3Q6ZXV5 915 aa9.2□□□□□ -0.94
HCG18-240ENST00000454269 TRAPPC11Q7Z392 1133 aa9.2□□□□□ -0.94
HCG18-240ENST00000454269 GTF2IRD2Q86UP8 949 aa9.2□□□□□ -0.94
HCG18-240ENST00000454269 CENPSQ8N2Z9 138 aa9.2□□□□□ -0.94
HCG18-240ENST00000454269 AGGF1Q8N302 714 aaeCLIP9.2□□□□□ -0.94
HCG18-240ENST00000454269 SLC35F6Q8N357 371 aa9.2□□□□□ -0.94
HCG18-240ENST00000454269 ALLCQ8N6M5 410 aa9.2□□□□□ -0.94
HCG18-240ENST00000454269 OR6S1Q8NH40 331 aa9.2□□□□□ -0.94
HCG18-240ENST00000454269 ADAMTS16Q8TE57 1224 aa9.2□□□□□ -0.94
HCG18-240ENST00000454269 VPS33AQ96AX1 596 aa9.2□□□□□ -0.94
HCG18-240ENST00000454269 MAP6Q96JE9 813 aa9.2□□□□□ -0.94
HCG18-240ENST00000454269 PRICKLE1Q96MT3 831 aaPredicted RBP9.2□□□□□ -0.94
HCG18-240ENST00000454269 LLPHQ9BRT6 129 aaKnown RBP9.2□□□□□ -0.94
HCG18-240ENST00000454269 C17orf80Q9BSJ5 609 aa9.2□□□□□ -0.94
HCG18-240ENST00000454269 ACAT2Q9BWD1 397 aa9.2□□□□□ -0.94
HCG18-240ENST00000454269 RBM38Q9H0Z9 239 aaKnown RBP9.2□□□□□ -0.94
HCG18-240ENST00000454269 SP110Q9HB58 689 aa9.2□□□□□ -0.94
HCG18-240ENST00000454269 TMBIM4Q9HC24 238 aa9.2□□□□□ -0.94
HCG18-240ENST00000454269 ZNF624Q9P2J8 865 aaPredicted RBP9.2□□□□□ -0.94
HCG18-240ENST00000454269 TRIM33Q9UPN9 1127 aa9.2□□□□□ -0.94
HCG18-240ENST00000454269 PCDHGA10Q9Y5H3 936 aa9.2□□□□□ -0.94
HCG18-240ENST00000454269 LTN1O94822 1766 aa9.19□□□□□ -0.94
HCG18-240ENST00000454269 ARHGEF37A1IGU5 675 aa9.19□□□□□ -0.94
HCG18-240ENST00000454269 WDR91A4D1P6 747 aa9.19□□□□□ -0.94
HCG18-240ENST00000454269 K7ENM7 598 aa9.19□□□□□ -0.94
HCG18-240ENST00000454269 SSX5O60225 188 aa9.19□□□□□ -0.94
HCG18-240ENST00000454269 GABBR2O75899 941 aa9.19□□□□□ -0.94
HCG18-240ENST00000454269 SLITRK3O94933 977 aa9.19□□□□□ -0.94
HCG18-240ENST00000454269 LARGE1O95461 756 aa9.19□□□□□ -0.94
HCG18-240ENST00000454269 GUCA1CO95843 209 aa9.19□□□□□ -0.94
HCG18-240ENST00000454269 RECKO95980 971 aa9.19□□□□□ -0.94
HCG18-240ENST00000454269 NR3C2P08235 984 aa9.19□□□□□ -0.94
HCG18-240ENST00000454269 LTA4HP09960 611 aaKnown RBP9.19□□□□□ -0.94
HCG18-240ENST00000454269 TMEM11P17152 192 aa9.19□□□□□ -0.94
HCG18-240ENST00000454269 SOX6P35712 828 aa9.19□□□□□ -0.94
HCG18-240ENST00000454269 ABCG1P45844 678 aa9.19□□□□□ -0.94
HCG18-240ENST00000454269 ECT2LQ008S8 904 aa9.19□□□□□ -0.94
HCG18-240ENST00000454269 NR5A1Q13285 461 aa9.19□□□□□ -0.94
HCG18-240ENST00000454269 WDR72Q3MJ13 1102 aa9.19□□□□□ -0.94
HCG18-240ENST00000454269 TTC22Q5TAA0 569 aa9.19□□□□□ -0.94
HCG18-240ENST00000454269 ERAP2Q6P179 960 aa9.19□□□□□ -0.94
HCG18-240ENST00000454269 KLHDC10Q6PID8 442 aa9.19□□□□□ -0.94
HCG18-240ENST00000454269 XKR5Q6UX68 686 aa9.19□□□□□ -0.94
HCG18-240ENST00000454269 OTOP3Q7RTS5 596 aa9.19□□□□□ -0.94
HCG18-240ENST00000454269 ACTRT2Q8TDY3 377 aa9.19□□□□□ -0.94
HCG18-240ENST00000454269 THAP11Q96EK4 314 aa9.19□□□□□ -0.94
HCG18-240ENST00000454269 DYDC2Q96IM9 177 aa9.19□□□□□ -0.94
HCG18-240ENST00000454269 TMEM237Q96Q45 408 aa9.19□□□□□ -0.94
HCG18-240ENST00000454269 DDX50Q9BQ39 737 aaKnown RBP9.19□□□□□ -0.94
HCG18-240ENST00000454269 OSBPL6Q9BZF3 934 aa9.19□□□□□ -0.94
HCG18-240ENST00000454269 ZFYVE28Q9HCC9 887 aa9.19□□□□□ -0.94
HCG18-240ENST00000454269 KIAA1586Q9HCI6 787 aa9.19□□□□□ -0.94
HCG18-240ENST00000454269 ZSWIM6Q9HCJ5 1215 aa9.19□□□□□ -0.94
HCG18-240ENST00000454269 ATP13A2Q9NQ11 1180 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms