RNA–Protein interactions for RNA: ENST00000450338.5

SEMA3F-207, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 1,693 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-207ENST00000450338 CTTNBP2NLQ9P2B4 639 aa23.54■■□□□ 1.36
SEMA3F-207ENST00000450338 SF3B1O75533 1304 aaKnown RBP eCLIP23.54■■□□□ 1.365e-10■■■■■ 120.6
SEMA3F-207ENST00000450338 CALB1P05937 261 aa23.54■■□□□ 1.36
SEMA3F-207ENST00000450338 CASQ1P31415 396 aa23.54■■□□□ 1.36
SEMA3F-207ENST00000450338 C2CD6Q53TS8 623 aa23.54■■□□□ 1.36
SEMA3F-207ENST00000450338 FUT10Q6P4F1 479 aa23.54■■□□□ 1.36
SEMA3F-207ENST00000450338 ANKRD52Q8NB46 1076 aa23.54■■□□□ 1.36
SEMA3F-207ENST00000450338 MSANTD4Q8NCY6 345 aa23.54■■□□□ 1.36
SEMA3F-207ENST00000450338 DPF3Q92784 378 aa23.54■■□□□ 1.36
SEMA3F-207ENST00000450338 YME1L1Q96TA2 773 aa23.54■■□□□ 1.36
SEMA3F-207ENST00000450338 HNRNPABQ99729 332 aaKnown RBP23.54■■□□□ 1.36
SEMA3F-207ENST00000450338 LBHD1Q9BQE6 289 aaPredicted RBP23.54■■□□□ 1.36
SEMA3F-207ENST00000450338 GPR62Q9BZJ7 368 aa23.54■■□□□ 1.36
SEMA3F-207ENST00000450338 OSGEPQ9NPF4 335 aa23.54■■□□□ 1.36
SEMA3F-207ENST00000450338 SETSIPP0DME0 302 aa23.53■■□□□ 1.36
SEMA3F-207ENST00000450338 RRM1P23921 792 aa23.53■■□□□ 1.36
SEMA3F-207ENST00000450338 FAM171A1Q5VUB5 890 aa23.53■■□□□ 1.36
SEMA3F-207ENST00000450338 UVRAGQ9P2Y5 699 aa23.53■■□□□ 1.36
SEMA3F-207ENST00000450338 MYBPHLA2RUH7 354 aa23.52■■□□□ 1.36
SEMA3F-207ENST00000450338 OAZ2O95190 189 aa23.52■■□□□ 1.36
SEMA3F-207ENST00000450338 BCAT1P54687 386 aa23.52■■□□□ 1.36
SEMA3F-207ENST00000450338 HADHBP55084 474 aaKnown RBP23.52■■□□□ 1.36
SEMA3F-207ENST00000450338 BST2Q10589 180 aaKnown RBP23.52■■□□□ 1.36
SEMA3F-207ENST00000450338 CCDC142Q17RM4 750 aa23.52■■□□□ 1.36
SEMA3F-207ENST00000450338 PTPN20Q4JDL3 420 aa23.52■■□□□ 1.36
SEMA3F-207ENST00000450338 INTS6LQ5JSJ4 861 aaKnown RBP23.52■■□□□ 1.36
SEMA3F-207ENST00000450338 TMEM173Q86WV6 379 aaPredicted RBP23.52■■□□□ 1.36
SEMA3F-207ENST00000450338 FUKQ8N0W3 1084 aa23.52■■□□□ 1.36
SEMA3F-207ENST00000450338 TPCN2Q8NHX9 752 aa23.52■■□□□ 1.36
SEMA3F-207ENST00000450338 MYCBPAPQ8TBZ2 947 aa23.52■■□□□ 1.36
SEMA3F-207ENST00000450338 HERVK_113Q902F9 699 aa23.52■■□□□ 1.36
SEMA3F-207ENST00000450338 CALR3Q96L12 384 aaKnown RBP23.52■■□□□ 1.36
SEMA3F-207ENST00000450338 NUP85Q9BW27 656 aa23.52■■□□□ 1.36
SEMA3F-207ENST00000450338 CHORDC1Q9UHD1 332 aaPredicted RBP23.52■■□□□ 1.36
SEMA3F-207ENST00000450338 COG5Q9UP83 839 aa23.52■■□□□ 1.36
SEMA3F-207ENST00000450338 PCDHGC5Q9Y5F6 944 aa23.52■■□□□ 1.36
SEMA3F-207ENST00000450338 FANCGO15287 622 aa23.51■■□□□ 1.35
SEMA3F-207ENST00000450338 MTA2O94776 668 aa23.51■■□□□ 1.35
SEMA3F-207ENST00000450338 GJB5O95377 273 aa23.51■■□□□ 1.35
SEMA3F-207ENST00000450338 FGFR3P22607 806 aa23.51■■□□□ 1.35
SEMA3F-207ENST00000450338 TSPY1Q01534 308 aa23.51■■□□□ 1.35
SEMA3F-207ENST00000450338 PDE4CQ08493 712 aa23.51■■□□□ 1.35
SEMA3F-207ENST00000450338 PDCLQ13371 301 aa23.51■■□□□ 1.35
SEMA3F-207ENST00000450338 KCNT2Q6UVM3 1135 aa23.51■■□□□ 1.35
SEMA3F-207ENST00000450338 CEP57Q86XR8 500 aa23.51■■□□□ 1.35
SEMA3F-207ENST00000450338 OR10T2Q8NGX3 314 aa23.51■■□□□ 1.35
SEMA3F-207ENST00000450338 BCL7CQ8WUZ0 217 aaPredicted RBP23.51■■□□□ 1.35
SEMA3F-207ENST00000450338 C18orf8Q96DM3 657 aa23.51■■□□□ 1.35
SEMA3F-207ENST00000450338 ZNF558Q96NG5 402 aa23.51■■□□□ 1.35
SEMA3F-207ENST00000450338 CPXM1Q96SM3 734 aa23.51■■□□□ 1.35
SEMA3F-207ENST00000450338 MED10Q9BTT4 135 aa23.51■■□□□ 1.35
SEMA3F-207ENST00000450338 CXXC1Q9P0U4 656 aaPredicted RBP23.51■■□□□ 1.35
SEMA3F-207ENST00000450338 STRIP2Q9ULQ0 834 aa23.51■■□□□ 1.35
SEMA3F-207ENST00000450338 CARNS1A5YM72 827 aa23.51■■□□□ 1.35
SEMA3F-207ENST00000450338 PALMO75781 387 aa23.51■■□□□ 1.35
SEMA3F-207ENST00000450338 PLCB3Q01970 1234 aa23.51■■□□□ 1.35
SEMA3F-207ENST00000450338 VARS2Q5ST30 1063 aaKnown RBP23.51■■□□□ 1.35
SEMA3F-207ENST00000450338 FAM171BQ6P995 826 aa23.51■■□□□ 1.35
SEMA3F-207ENST00000450338 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.51■■□□□ 1.35
SEMA3F-207ENST00000450338 PHLDB2Q86SQ0 1253 aa23.51■■□□□ 1.35
SEMA3F-207ENST00000450338 ZNF564Q8TBZ8 553 aaPredicted RBP23.51■■□□□ 1.35
SEMA3F-207ENST00000450338 SLC35F5Q8WV83 523 aa23.51■■□□□ 1.35
SEMA3F-207ENST00000450338 PCED1BQ96HM7 432 aa23.51■■□□□ 1.35
SEMA3F-207ENST00000450338 B3GNT5Q9BYG0 378 aa23.51■■□□□ 1.35
SEMA3F-207ENST00000450338 SYNCQ9H7C4 482 aa23.51■■□□□ 1.35
SEMA3F-207ENST00000450338 MRPL42Q9Y6G3 142 aaKnown RBP23.51■■□□□ 1.35
SEMA3F-207ENST00000450338 GRID2IPA4D2P6 1211 aa23.5■■□□□ 1.35
SEMA3F-207ENST00000450338 CTAGE9A4FU28 777 aa23.5■■□□□ 1.35
SEMA3F-207ENST00000450338 CLDN5O00501 218 aa23.5■■□□□ 1.35
SEMA3F-207ENST00000450338 LAG3P18627 525 aa23.5■■□□□ 1.35
SEMA3F-207ENST00000450338 MAPRE1Q15691 268 aaKnown RBP23.5■■□□□ 1.35
SEMA3F-207ENST00000450338 PLEKHA7Q6IQ23 1121 aa23.5■■□□□ 1.35
SEMA3F-207ENST00000450338 PAQR9Q6ZVX9 377 aa23.5■■□□□ 1.35
SEMA3F-207ENST00000450338 STK32AQ8WU08 396 aa23.5■■□□□ 1.35
SEMA3F-207ENST00000450338 IGSF21Q96ID5 467 aa23.5■■□□□ 1.35
SEMA3F-207ENST00000450338 NAPGQ99747 312 aaPredicted RBP23.5■■□□□ 1.35
SEMA3F-207ENST00000450338 DUSP16Q9BY84 665 aa23.5■■□□□ 1.35
SEMA3F-207ENST00000450338 ST7Q9NRC1 585 aa23.5■■□□□ 1.35
SEMA3F-207ENST00000450338 SCINQ9Y6U3 715 aa23.5■■□□□ 1.35
SEMA3F-207ENST00000450338 KIAA1671Q9BY89 1806 aa23.49■■□□□ 1.35
SEMA3F-207ENST00000450338 GABRB2P47870 512 aa23.49■■□□□ 1.35
SEMA3F-207ENST00000450338 SLC8A3P57103 927 aa23.49■■□□□ 1.35
SEMA3F-207ENST00000450338 HTRA4P83105 476 aaPredicted RBP23.49■■□□□ 1.35
SEMA3F-207ENST00000450338 MRPL58Q14197 206 aaKnown RBP23.49■■□□□ 1.35
SEMA3F-207ENST00000450338 CYP4A22Q5TCH4 519 aa23.49■■□□□ 1.35
SEMA3F-207ENST00000450338 LLGL2Q6P1M3 1020 aa23.49■■□□□ 1.35
SEMA3F-207ENST00000450338 IPO4Q8TEX9 1081 aaKnown RBP23.49■■□□□ 1.35
SEMA3F-207ENST00000450338 TMEM209Q96SK2 561 aa23.49■■□□□ 1.35
SEMA3F-207ENST00000450338 PKMYT1Q99640 499 aa23.49■■□□□ 1.35
SEMA3F-207ENST00000450338 ZBED2Q9BTP6 218 aa23.49■■□□□ 1.35
SEMA3F-207ENST00000450338 MIS12Q9H081 205 aa23.49■■□□□ 1.35
SEMA3F-207ENST00000450338 MRPL47Q9HD33 250 aaKnown RBP23.49■■□□□ 1.35
SEMA3F-207ENST00000450338 PARVAQ9NVD7 372 aa23.49■■□□□ 1.35
SEMA3F-207ENST00000450338 SLC4A7Q9Y6M7 1214 aa23.49■■□□□ 1.35
SEMA3F-207ENST00000450338 PTPRDP23468 1912 aa23.48■■□□□ 1.35
SEMA3F-207ENST00000450338 TULP2O00295 520 aa23.48■■□□□ 1.35
SEMA3F-207ENST00000450338 CAPN15O75808 1086 aa23.48■■□□□ 1.35
SEMA3F-207ENST00000450338 NPR3P17342 541 aa23.48■■□□□ 1.35
SEMA3F-207ENST00000450338 PMF1Q6P1K2 205 aa23.48■■□□□ 1.35
SEMA3F-207ENST00000450338 FAM35AQ86V20 835 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms