RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-238ENST00000449544 RFX6Q8HWS3 928 aa8.9□□□□□ -0.98
HCG18-238ENST00000449544 MAP4K3Q8IVH8 894 aa8.9□□□□□ -0.98
HCG18-238ENST00000449544 MFN1Q8IWA4 741 aa8.9□□□□□ -0.98
HCG18-238ENST00000449544 SIX5Q8N196 739 aa8.9□□□□□ -0.98
HCG18-238ENST00000449544 NUP93Q8N1F7 819 aa8.9□□□□□ -0.98
HCG18-238ENST00000449544 EFHBQ8N7U6 833 aa8.9□□□□□ -0.98
HCG18-238ENST00000449544 KCTD6Q8NC69 237 aa8.9□□□□□ -0.98
HCG18-238ENST00000449544 SPATA18Q8TC71 538 aa8.9□□□□□ -0.98
HCG18-238ENST00000449544 KIAA1524Q8TCG1 905 aa8.9□□□□□ -0.98
HCG18-238ENST00000449544 BPIFB1Q8TDL5 484 aa8.9□□□□□ -0.98
HCG18-238ENST00000449544 SLC22A17Q8WUG5 538 aa8.9□□□□□ -0.98
HCG18-238ENST00000449544 IQCDQ96DY2 449 aa8.9□□□□□ -0.98
HCG18-238ENST00000449544 FAM122AQ96E09 287 aa8.9□□□□□ -0.98
HCG18-238ENST00000449544 PDZD7Q9H5P4 517 aa8.9□□□□□ -0.98
HCG18-238ENST00000449544 MAN1B1Q9UKM7 699 aa8.9□□□□□ -0.98
HCG18-238ENST00000449544 A0A1B0GUA9 196 aa8.9□□□□□ -0.99
HCG18-238ENST00000449544 TRIM49BA6NDI0 452 aa8.9□□□□□ -0.99
HCG18-238ENST00000449544 TLR5O60602 858 aa8.9□□□□□ -0.99
HCG18-238ENST00000449544 CD2BP2O95400 341 aaKnown RBP8.9□□□□□ -0.99
HCG18-238ENST00000449544 HNRNPA1P09651 372 aaKnown RBP eCLIP8.9□□□□□ -0.99
HCG18-238ENST00000449544 RAP1GAPP47736 663 aa8.9□□□□□ -0.99
HCG18-238ENST00000449544 NDST1P52848 882 aa8.9□□□□□ -0.99
HCG18-238ENST00000449544 OXCT1P55809 520 aa8.9□□□□□ -0.99
HCG18-238ENST00000449544 EVCP57679 992 aa8.9□□□□□ -0.99
HCG18-238ENST00000449544 TEAD4Q15561 434 aa8.9□□□□□ -0.99
HCG18-238ENST00000449544 DNAJB7Q7Z6W7 309 aaPredicted RBP8.9□□□□□ -0.99
HCG18-238ENST00000449544 HMGB4Q8WW32 186 aa8.9□□□□□ -0.99
HCG18-238ENST00000449544 EDEM1Q92611 657 aa8.9□□□□□ -0.99
HCG18-238ENST00000449544 PCSK1NQ9UHG2 260 aa8.9□□□□□ -0.99
HCG18-238ENST00000449544 DNMT3LQ9UJW3 386 aa8.9□□□□□ -0.99
HCG18-238ENST00000449544 APC2O95996 2303 aa8.89□□□□□ -0.99
HCG18-238ENST00000449544 NDC80O14777 642 aa8.89□□□□□ -0.99
HCG18-238ENST00000449544 OPLAHO14841 1288 aa8.89□□□□□ -0.99
HCG18-238ENST00000449544 RFPL2O75678 378 aa8.89□□□□□ -0.99
HCG18-238ENST00000449544 CTSAP10619 480 aa8.89□□□□□ -0.99
HCG18-238ENST00000449544 MAPTP10636 758 aaKnown RBP8.89□□□□□ -0.99
HCG18-238ENST00000449544 PDGFRAP16234 1089 aa8.89□□□□□ -0.99
HCG18-238ENST00000449544 CASP4P49662 377 aa8.89□□□□□ -0.99
HCG18-238ENST00000449544 GSDMDP57764 484 aa8.89□□□□□ -0.99
HCG18-238ENST00000449544 PKP1Q13835 747 aa8.89□□□□□ -0.99
HCG18-238ENST00000449544 NAA35Q5VZE5 725 aa8.89□□□□□ -0.99
HCG18-238ENST00000449544 KAZNQ674X7 775 aa8.89□□□□□ -0.99
HCG18-238ENST00000449544 VSTM1Q6UX27 236 aa8.89□□□□□ -0.99
HCG18-238ENST00000449544 ZNF461Q8TAF7 563 aa8.89□□□□□ -0.99
HCG18-238ENST00000449544 MYLPFQ96A32 169 aa8.89□□□□□ -0.99
HCG18-238ENST00000449544 RMDN1Q96DB5 314 aa8.89□□□□□ -0.99
HCG18-238ENST00000449544 AGXT2Q9BYV1 514 aa8.89□□□□□ -0.99
HCG18-238ENST00000449544 RNF39Q9H2S5 420 aa8.89□□□□□ -0.99
HCG18-238ENST00000449544 GKN1Q9NS71 199 aa8.89□□□□□ -0.99
HCG18-238ENST00000449544 MAP10Q9P2G4 905 aa8.89□□□□□ -0.99
HCG18-238ENST00000449544 DNAJB4Q9UDY4 337 aa8.89□□□□□ -0.99
HCG18-238ENST00000449544 HCFC2Q9Y5Z7 792 aa8.89□□□□□ -0.99
HCG18-238ENST00000449544 TAF1P21675 1872 aa8.89□□□□□ -0.99
HCG18-238ENST00000449544 ZBTB22O15209 634 aa8.89□□□□□ -0.99
HCG18-238ENST00000449544 TEX28O15482 410 aa8.89□□□□□ -0.99
HCG18-238ENST00000449544 GADD45BO75293 160 aaPredicted RBP8.89□□□□□ -0.99
HCG18-238ENST00000449544 RHOCP08134 193 aa8.89□□□□□ -0.99
HCG18-238ENST00000449544 VDRP11473 427 aa8.89□□□□□ -0.99
HCG18-238ENST00000449544 EPCAMP16422 314 aa8.89□□□□□ -0.99
HCG18-238ENST00000449544 TBX4P57082 545 aa8.89□□□□□ -0.99
HCG18-238ENST00000449544 TPI1P60174 286 aa8.89□□□□□ -0.99
HCG18-238ENST00000449544 MBTD1Q05BQ5 628 aa8.89□□□□□ -0.99
HCG18-238ENST00000449544 CYP24A1Q07973 514 aa8.89□□□□□ -0.99
HCG18-238ENST00000449544 TRIM48Q8IWZ4 208 aa8.89□□□□□ -0.99
HCG18-238ENST00000449544 CCDC89Q8N998 374 aa8.89□□□□□ -0.99
HCG18-238ENST00000449544 TMEM161BQ8NDZ6 487 aa8.89□□□□□ -0.99
HCG18-238ENST00000449544 SCG3Q8WXD2 468 aaKnown RBP8.89□□□□□ -0.99
HCG18-238ENST00000449544 IFT43Q96FT9 208 aa8.89□□□□□ -0.99
HCG18-238ENST00000449544 WDR35Q9P2L0 1181 aa8.89□□□□□ -0.99
HCG18-238ENST00000449544 TUBGCP4Q9UGJ1 667 aa8.89□□□□□ -0.99
HCG18-238ENST00000449544 FBXL5Q9UKA1 691 aa8.89□□□□□ -0.99
HCG18-238ENST00000449544 SCINQ9Y6U3 715 aa8.89□□□□□ -0.99
HCG18-238ENST00000449544 LRRD1A4D1F6 860 aa8.89□□□□□ -0.99
HCG18-238ENST00000449544 AKR1B15C9JRZ8 316 aaPredicted RBP8.89□□□□□ -0.99
HCG18-238ENST00000449544 FBXO21O94952 628 aa8.89□□□□□ -0.99
HCG18-238ENST00000449544 ETFBP38117 255 aa8.89□□□□□ -0.99
HCG18-238ENST00000449544 CDH8P55286 799 aa8.89□□□□□ -0.99
HCG18-238ENST00000449544 TAP1Q03518 808 aa8.89□□□□□ -0.99
HCG18-238ENST00000449544 MESDQ14696 234 aa8.89□□□□□ -0.99
HCG18-238ENST00000449544 C1orf186Q6ZWK4 172 aa8.89□□□□□ -0.99
HCG18-238ENST00000449544 ZNF280BQ86YH2 543 aa8.89□□□□□ -0.99
HCG18-238ENST00000449544 RSAD2Q8WXG1 361 aa8.89□□□□□ -0.99
HCG18-238ENST00000449544 HSPH1Q92598 858 aa8.89□□□□□ -0.99
HCG18-238ENST00000449544 KIF2CQ99661 725 aa8.89□□□□□ -0.99
HCG18-238ENST00000449544 NFKBIZQ9BYH8 718 aa8.89□□□□□ -0.99
HCG18-238ENST00000449544 WDCPQ9H6R7 721 aa8.89□□□□□ -0.99
HCG18-238ENST00000449544 ZWILCHQ9H900 591 aa8.89□□□□□ -0.99
HCG18-238ENST00000449544 OLFML3Q9NRN5 406 aa8.89□□□□□ -0.99
HCG18-238ENST00000449544 RWDD2AQ9UIY3 292 aa8.89□□□□□ -0.99
HCG18-238ENST00000449544 YIPF1Q9Y548 306 aa8.89□□□□□ -0.99
HCG18-238ENST00000449544 BZW2Q9Y6E2 419 aaKnown RBP8.89□□□□□ -0.99
HCG18-238ENST00000449544 NEDD8-MDP1E9PL57 170 aa8.88□□□□□ -0.99
HCG18-238ENST00000449544 ASGR2P07307 311 aa8.88□□□□□ -0.99
HCG18-238ENST00000449544 CTSEP14091 401 aa8.88□□□□□ -0.99
HCG18-238ENST00000449544 TAF10Q12962 218 aa8.88□□□□□ -0.99
HCG18-238ENST00000449544 ANO7Q6IWH7 933 aa8.88□□□□□ -0.99
HCG18-238ENST00000449544 TTC23LQ6PF05 361 aa8.88□□□□□ -0.99
HCG18-238ENST00000449544 FRMD5Q7Z6J6 570 aa8.88□□□□□ -0.99
HCG18-238ENST00000449544 ZSCAN18Q8TBC5 510 aaPredicted RBP8.88□□□□□ -0.99
HCG18-238ENST00000449544 MTMR9Q96QG7 549 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms