RNA–Protein interactions for RNA: ENST00000449260.6

PMEL-201, Transcript of premelanosome protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PMEL, Length 2,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMEL-201ENST00000449260 SLITRK1Q96PX8 696 aa13.48□□□□□ -0.25
PMEL-201ENST00000449260 EPB41L4BQ9H329 900 aa13.48□□□□□ -0.25
PMEL-201ENST00000449260 PABPC3Q9H361 631 aaKnown RBP13.48□□□□□ -0.25
PMEL-201ENST00000449260 LRRC4CQ9HCJ2 640 aa13.48□□□□□ -0.25
PMEL-201ENST00000449260 SAGE1Q9NXZ1 904 aa13.48□□□□□ -0.25
PMEL-201ENST00000449260 FEZ2Q9UHY8 353 aaPredicted RBP13.48□□□□□ -0.25
PMEL-201ENST00000449260 LCMT1Q9UIC8 334 aa13.48□□□□□ -0.25
PMEL-201ENST00000449260 Q9Y3F1 56 aa13.48□□□□□ -0.25
PMEL-201ENST00000449260 HES2Q9Y543 173 aa13.48□□□□□ -0.25
PMEL-201ENST00000449260 MYADML2A6NDP7 307 aa13.48□□□□□ -0.25
PMEL-201ENST00000449260 M0QYV0 167 aa13.48□□□□□ -0.25
PMEL-201ENST00000449260 SEPT4O43236 478 aa13.48□□□□□ -0.25
PMEL-201ENST00000449260 GAS8O95995 478 aa13.48□□□□□ -0.25
PMEL-201ENST00000449260 SHBGP04278 402 aa13.48□□□□□ -0.25
PMEL-201ENST00000449260 ERBB2P04626 1255 aa13.48□□□□□ -0.25
PMEL-201ENST00000449260 VDRP11473 427 aa13.48□□□□□ -0.25
PMEL-201ENST00000449260 ATF7P17544 494 aaPredicted RBP13.48□□□□□ -0.25
PMEL-201ENST00000449260 ADCY2Q08462 1091 aa13.48□□□□□ -0.25
PMEL-201ENST00000449260 PTK6Q13882 451 aa13.48□□□□□ -0.25
PMEL-201ENST00000449260 CNGA2Q16280 664 aa13.48□□□□□ -0.25
PMEL-201ENST00000449260 KRT71Q3SY84 523 aa13.48□□□□□ -0.25
PMEL-201ENST00000449260 GNASQ5JWF2 1037 aa13.48□□□□□ -0.25
PMEL-201ENST00000449260 LRRC38Q5VT99 294 aa13.48□□□□□ -0.25
PMEL-201ENST00000449260 SLC27A1Q6PCB7 646 aa13.48□□□□□ -0.25
PMEL-201ENST00000449260 KDM7AQ6ZMT4 941 aa13.48□□□□□ -0.25
PMEL-201ENST00000449260 SYDE1Q6ZW31 735 aaPredicted RBP13.48□□□□□ -0.25
PMEL-201ENST00000449260 APBB1IPQ7Z5R6 666 aaPredicted RBP13.48□□□□□ -0.25
PMEL-201ENST00000449260 CCDC25Q86WR0 208 aa13.48□□□□□ -0.25
PMEL-201ENST00000449260 NT5DC4Q86YG4 428 aa13.48□□□□□ -0.25
PMEL-201ENST00000449260 DNAJB3Q8WWF6 145 aa13.48□□□□□ -0.25
PMEL-201ENST00000449260 SEMA4AQ9H3S1 761 aa13.48□□□□□ -0.25
PMEL-201ENST00000449260 SPC25Q9HBM1 224 aa13.48□□□□□ -0.25
PMEL-201ENST00000449260 RNF19AQ9NV58 838 aa13.48□□□□□ -0.25
PMEL-201ENST00000449260 WHRNQ9P202 907 aa13.48□□□□□ -0.25
PMEL-201ENST00000449260 BARX2Q9UMQ3 279 aaPredicted RBP13.48□□□□□ -0.25
PMEL-201ENST00000449260 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.48□□□□□ -0.25
PMEL-201ENST00000449260 BRCA2P51587 3418 aa13.47□□□□□ -0.25
PMEL-201ENST00000449260 SMIM35A0A1B0GVV1 85 aa13.47□□□□□ -0.25
PMEL-201ENST00000449260 CLGNO14967 610 aa13.47□□□□□ -0.25
PMEL-201ENST00000449260 RPS6KA5O75582 802 aa13.47□□□□□ -0.25
PMEL-201ENST00000449260 HMGCRP04035 888 aa13.47□□□□□ -0.25
PMEL-201ENST00000449260 VPS41P49754 854 aa13.47□□□□□ -0.25
PMEL-201ENST00000449260 PSEN2P49810 448 aa13.47□□□□□ -0.25
PMEL-201ENST00000449260 ZNF200P98182 395 aaPredicted RBP13.47□□□□□ -0.25
PMEL-201ENST00000449260 CDC42EP1Q00587 391 aa13.47□□□□□ -0.25
PMEL-201ENST00000449260 ARHGEF6Q15052 776 aa13.47□□□□□ -0.25
PMEL-201ENST00000449260 DENND2CQ68D51 928 aa13.47□□□□□ -0.25
PMEL-201ENST00000449260 SPOCD1Q6ZMY3 1216 aa13.47□□□□□ -0.25
PMEL-201ENST00000449260 XYLT1Q86Y38 959 aa13.47□□□□□ -0.25
PMEL-201ENST00000449260 NIPA2Q8N8Q9 360 aa13.47□□□□□ -0.25
PMEL-201ENST00000449260 RAPGEF5Q92565 580 aa13.47□□□□□ -0.25
PMEL-201ENST00000449260 ZMAT2Q96NC0 199 aaKnown RBP13.47□□□□□ -0.25
PMEL-201ENST00000449260 PLEKHA5Q9HAU0 1116 aa13.47□□□□□ -0.25
PMEL-201ENST00000449260 METTL5Q9NRN9 209 aaKnown RBP13.47□□□□□ -0.25
PMEL-201ENST00000449260 MBLAC1A4D2B0 266 aaPredicted RBP13.46□□□□□ -0.25
PMEL-201ENST00000449260 DARSP14868 501 aaKnown RBP13.46□□□□□ -0.25
PMEL-201ENST00000449260 ITIH2P19823 946 aa13.46□□□□□ -0.25
PMEL-201ENST00000449260 HPDP32754 393 aaPredicted RBP13.46□□□□□ -0.25
PMEL-201ENST00000449260 ADCY8P40145 1251 aa13.46□□□□□ -0.25
PMEL-201ENST00000449260 YARSP54577 528 aaKnown RBP13.46□□□□□ -0.25
PMEL-201ENST00000449260 EIF3BP55884 814 aaKnown RBP13.46□□□□□ -0.25
PMEL-201ENST00000449260 MYO1EQ12965 1108 aa13.46□□□□□ -0.25
PMEL-201ENST00000449260 PDCLQ13371 301 aa13.46□□□□□ -0.25
PMEL-201ENST00000449260 SLC29A2Q14542 456 aa13.46□□□□□ -0.25
PMEL-201ENST00000449260 ZNF268Q14587 947 aaPredicted RBP13.46□□□□□ -0.25
PMEL-201ENST00000449260 UBAP2Q5T6F2 1119 aaKnown RBP13.46□□□□□ -0.25
PMEL-201ENST00000449260 NOTUMQ6P988 496 aa13.46□□□□□ -0.25
PMEL-201ENST00000449260 EMC1Q8N766 993 aa13.46□□□□□ -0.25
PMEL-201ENST00000449260 UHMK1Q8TAS1 419 aaKnown RBP13.46□□□□□ -0.25
PMEL-201ENST00000449260 SNF8Q96H20 258 aa13.46□□□□□ -0.25
PMEL-201ENST00000449260 APOL6Q9BWW8 343 aa13.46□□□□□ -0.25
PMEL-201ENST00000449260 DDX56Q9NY93 547 aaKnown RBP13.46□□□□□ -0.25
PMEL-201ENST00000449260 WDR35Q9P2L0 1181 aa13.46□□□□□ -0.25
PMEL-201ENST00000449260 CASP8AP2Q9UKL3 1982 aa13.46□□□□□ -0.25
PMEL-201ENST00000449260 NOVA2Q9UNW9 492 aaKnown RBP13.46□□□□□ -0.25
PMEL-201ENST00000449260 TRIM17Q9Y577 477 aa13.46□□□□□ -0.25
PMEL-201ENST00000449260 RALGAPA2Q2PPJ7 1873 aa13.46□□□□□ -0.25
PMEL-201ENST00000449260 LRRD1A4D1F6 860 aa13.46□□□□□ -0.26
PMEL-201ENST00000449260 PPEF2O14830 753 aa13.46□□□□□ -0.26
PMEL-201ENST00000449260 TREHO43280 583 aa13.46□□□□□ -0.26
PMEL-201ENST00000449260 TJP3O95049 919 aa13.46□□□□□ -0.26
PMEL-201ENST00000449260 STAU1O95793 577 aaKnown RBP13.46□□□□□ -0.26
PMEL-201ENST00000449260 GNRH1P01148 92 aa13.46□□□□□ -0.26
PMEL-201ENST00000449260 ATF2P15336 505 aa13.46□□□□□ -0.26
PMEL-201ENST00000449260 IVDP26440 423 aa13.46□□□□□ -0.26
PMEL-201ENST00000449260 GPD2P43304 727 aa13.46□□□□□ -0.26
PMEL-201ENST00000449260 INCA1Q0VD86 236 aa13.46□□□□□ -0.26
PMEL-201ENST00000449260 SLMAPQ14BN4 828 aa13.46□□□□□ -0.26
PMEL-201ENST00000449260 GLRA4Q5JXX5 417 aa13.46□□□□□ -0.26
PMEL-201ENST00000449260 AGBL2Q5U5Z8 902 aa13.46□□□□□ -0.26
PMEL-201ENST00000449260 ZNF365Q70YC5 407 aa13.46□□□□□ -0.26
PMEL-201ENST00000449260 GSTA5Q7RTV2 222 aa13.46□□□□□ -0.26
PMEL-201ENST00000449260 C18orf25Q96B23 403 aaPredicted RBP13.46□□□□□ -0.26
PMEL-201ENST00000449260 SNX27Q96L92 541 aa13.46□□□□□ -0.26
PMEL-201ENST00000449260 NT5C1AQ9BXI3 368 aa13.46□□□□□ -0.26
PMEL-201ENST00000449260 FAM129AQ9BZQ8 928 aa13.46□□□□□ -0.26
PMEL-201ENST00000449260 TRIM6Q9C030 488 aaPredicted RBP13.46□□□□□ -0.26
PMEL-201ENST00000449260 ZWILCHQ9H900 591 aa13.46□□□□□ -0.26
PMEL-201ENST00000449260 XPNPEP3Q9NQH7 507 aa13.46□□□□□ -0.26
PMEL-201ENST00000449260 DNAH12Q6ZR08 3092 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms