RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 HPSEQ9Y251 543 aa21.08■□□□□ 0.97
VCP-203ENST00000448530 R4GN57 208 aa21.08■□□□□ 0.97
VCP-203ENST00000448530 HCRTO43612 131 aa21.07■□□□□ 0.96
VCP-203ENST00000448530 KIF20AO95235 890 aa21.07■□□□□ 0.96
VCP-203ENST00000448530 PRAMEF12O95522 483 aa21.07■□□□□ 0.96
VCP-203ENST00000448530 CST3P01034 146 aaPredicted RBP21.07■□□□□ 0.96
VCP-203ENST00000448530 F11P03951 625 aa21.07■□□□□ 0.96
VCP-203ENST00000448530 PDGFRBP09619 1106 aa21.07■□□□□ 0.96
VCP-203ENST00000448530 MAGEA11P43364 429 aa21.07■□□□□ 0.96
VCP-203ENST00000448530 MLLT6P55198 1093 aaPredicted RBP21.07■□□□□ 0.96
VCP-203ENST00000448530 PSMC1P62191 440 aaKnown RBP21.07■□□□□ 0.96
VCP-203ENST00000448530 PLCB2Q00722 1185 aa21.07■□□□□ 0.96
VCP-203ENST00000448530 BIRC3Q13489 604 aa21.07■□□□□ 0.96
VCP-203ENST00000448530 WDR72Q3MJ13 1102 aa21.07■□□□□ 0.96
VCP-203ENST00000448530 FAM171BQ6P995 826 aa21.07■□□□□ 0.96
VCP-203ENST00000448530 LIMS2Q7Z4I7 341 aa21.07■□□□□ 0.96
VCP-203ENST00000448530 CMTM8Q8IZV2 173 aa21.07■□□□□ 0.96
VCP-203ENST00000448530 MAB21L3Q8N8X9 362 aa21.07■□□□□ 0.96
VCP-203ENST00000448530 KIAA0895Q8NCT3 520 aa21.07■□□□□ 0.96
VCP-203ENST00000448530 STKLD1Q8NE28 680 aa21.07■□□□□ 0.96
VCP-203ENST00000448530 SYAP1Q96A49 352 aaPredicted RBP21.07■□□□□ 0.96
VCP-203ENST00000448530 CHAMP1Q96JM3 812 aa21.07■□□□□ 0.96
VCP-203ENST00000448530 SLC46A2Q9BY10 475 aa21.07■□□□□ 0.96
VCP-203ENST00000448530 C8orf33Q9H7E9 229 aaPredicted RBP21.07■□□□□ 0.96
VCP-203ENST00000448530 FBXO4Q9UKT5 387 aa21.07■□□□□ 0.96
VCP-203ENST00000448530 SLC38A8A6NNN8 435 aa21.06■□□□□ 0.96
VCP-203ENST00000448530 SOBPA7XYQ1 873 aa21.06■□□□□ 0.96
VCP-203ENST00000448530 ARNTLO00327 626 aa21.06■□□□□ 0.96
VCP-203ENST00000448530 ATP2C2O75185 946 aa21.06■□□□□ 0.96
VCP-203ENST00000448530 RPN1P04843 607 aaKnown RBP21.06■□□□□ 0.96
VCP-203ENST00000448530 CCNE1P24864 410 aa21.06■□□□□ 0.96
VCP-203ENST00000448530 LMO2P25791 158 aa21.06■□□□□ 0.96
VCP-203ENST00000448530 ATICP31939 592 aa21.06■□□□□ 0.96
VCP-203ENST00000448530 GNL1P36915 607 aaPredicted RBP21.06■□□□□ 0.96
VCP-203ENST00000448530 NDUFA8P51970 172 aa21.06■□□□□ 0.96
VCP-203ENST00000448530 AP3M2P53677 418 aa21.06■□□□□ 0.96
VCP-203ENST00000448530 CYP27A1Q02318 531 aa21.06■□□□□ 0.96
VCP-203ENST00000448530 CSTF1Q05048 431 aaKnown RBP21.06■□□□□ 0.96
VCP-203ENST00000448530 BECN1Q14457 450 aa21.06■□□□□ 0.96
VCP-203ENST00000448530 FSIP1Q8NA03 581 aa21.06■□□□□ 0.96
VCP-203ENST00000448530 OR6B3Q8NGW1 331 aa21.06■□□□□ 0.96
VCP-203ENST00000448530 TRMT2BQ96GJ1 504 aaKnown RBP21.06■□□□□ 0.96
VCP-203ENST00000448530 SMG9Q9H0W8 520 aaKnown RBP21.06■□□□□ 0.96
VCP-203ENST00000448530 RIF1Q5UIP0 2472 aaKnown RBP21.06■□□□□ 0.96
VCP-203ENST00000448530 USP34Q70CQ2 3546 aa21.05■□□□□ 0.96
VCP-203ENST00000448530 OBSL1O75147 1896 aa21.05■□□□□ 0.96
VCP-203ENST00000448530 PTPRZ1P23471 2315 aaPredicted RBP21.05■□□□□ 0.96
VCP-203ENST00000448530 PDXKO00764 312 aa21.05■□□□□ 0.96
VCP-203ENST00000448530 TACC1O75410 805 aa21.05■□□□□ 0.96
VCP-203ENST00000448530 NOL4O94818 638 aa21.05■□□□□ 0.96
VCP-203ENST00000448530 FAM163BP0C2L3 166 aa21.05■□□□□ 0.96
VCP-203ENST00000448530 ANXA13P27216 316 aa21.05■□□□□ 0.96
VCP-203ENST00000448530 MYL6P60660 151 aa21.05■□□□□ 0.96
VCP-203ENST00000448530 CCDC142Q17RM4 750 aa21.05■□□□□ 0.96
VCP-203ENST00000448530 ZNF528Q3MIS6 628 aa21.05■□□□□ 0.96
VCP-203ENST00000448530 VSTM1Q6UX27 236 aa21.05■□□□□ 0.96
VCP-203ENST00000448530 TMEM150AQ86TG1 271 aa21.05■□□□□ 0.96
VCP-203ENST00000448530 SLC9A9Q8IVB4 645 aa21.05■□□□□ 0.96
VCP-203ENST00000448530 ZNF516Q92618 1163 aa21.05■□□□□ 0.96
VCP-203ENST00000448530 MYLPFQ96A32 169 aa21.05■□□□□ 0.96
VCP-203ENST00000448530 CCDC34Q96HJ3 373 aa21.05■□□□□ 0.96
VCP-203ENST00000448530 ZFYVE19Q96K21 471 aa21.05■□□□□ 0.96
VCP-203ENST00000448530 LRRC3BQ96PB8 259 aa21.05■□□□□ 0.96
VCP-203ENST00000448530 KIF9Q9HAQ2 790 aa21.05■□□□□ 0.96
VCP-203ENST00000448530 LMAN1LQ9HAT1 526 aa21.05■□□□□ 0.96
VCP-203ENST00000448530 NXF1Q9UBU9 619 aaKnown RBP21.05■□□□□ 0.96
VCP-203ENST00000448530 FAM237AA0A1B0GTK4 181 aa21.04■□□□□ 0.96
VCP-203ENST00000448530 A0A1W2PQ27 194 aa21.04■□□□□ 0.96
VCP-203ENST00000448530 A0A1W2PQ64 194 aa21.04■□□□□ 0.96
VCP-203ENST00000448530 A0A1W2PQD8 194 aa21.04■□□□□ 0.96
VCP-203ENST00000448530 SHISA7A6NL88 538 aa21.04■□□□□ 0.96
VCP-203ENST00000448530 CALUO43852 315 aaPredicted RBP21.04■□□□□ 0.96
VCP-203ENST00000448530 STAU1O95793 577 aaKnown RBP21.04■□□□□ 0.96
VCP-203ENST00000448530 LMNAP02545 664 aaKnown RBP21.04■□□□□ 0.96
VCP-203ENST00000448530 NR3C1P04150 777 aa21.04■□□□□ 0.96
VCP-203ENST00000448530 GRIK1P39086 918 aa21.04■□□□□ 0.96
VCP-203ENST00000448530 CASP4P49662 377 aa21.04■□□□□ 0.96
VCP-203ENST00000448530 TXNDC8Q6A555 127 aa21.04■□□□□ 0.96
VCP-203ENST00000448530 MON1AQ86VX9 555 aa21.04■□□□□ 0.96
VCP-203ENST00000448530 RALGPS2Q86X27 583 aaPredicted RBP21.04■□□□□ 0.96
VCP-203ENST00000448530 MAML2Q8IZL2 1156 aaPredicted RBP21.04■□□□□ 0.96
VCP-203ENST00000448530 ADSSL1Q8N142 457 aa21.04■□□□□ 0.96
VCP-203ENST00000448530 TTC8Q8TAM2 541 aa21.04■□□□□ 0.96
VCP-203ENST00000448530 MYCBPAPQ8TBZ2 947 aa21.04■□□□□ 0.96
VCP-203ENST00000448530 MYRFLQ96LU7 910 aa21.04■□□□□ 0.96
VCP-203ENST00000448530 MRPL45Q9BRJ2 306 aaKnown RBP21.04■□□□□ 0.96
VCP-203ENST00000448530 IER2Q9BTL4 223 aa21.04■□□□□ 0.96
VCP-203ENST00000448530 CRTAC1Q9NQ79 661 aa21.04■□□□□ 0.96
VCP-203ENST00000448530 TDP1Q9NUW8 608 aa21.04■□□□□ 0.96
VCP-203ENST00000448530 FRMD4BQ9Y2L6 1034 aa21.04■□□□□ 0.96
VCP-203ENST00000448530 FAM186AA6NE01 2351 aa21.04■□□□□ 0.96
VCP-203ENST00000448530 VPS13AQ96RL7 3174 aa21.04■□□□□ 0.96
VCP-203ENST00000448530 KINO60870 393 aaKnown RBP21.03■□□□□ 0.96
VCP-203ENST00000448530 BDNFP23560 247 aa21.03■□□□□ 0.96
VCP-203ENST00000448530 FZD5Q13467 585 aa21.03■□□□□ 0.96
VCP-203ENST00000448530 LRRC32Q14392 662 aa21.03■□□□□ 0.96
VCP-203ENST00000448530 PPP2R5DQ14738 602 aa21.03■□□□□ 0.96
VCP-203ENST00000448530 MDH1BQ5I0G3 518 aa21.03■□□□□ 0.96
VCP-203ENST00000448530 CC2D1AQ6P1N0 951 aaPredicted RBP21.03■□□□□ 0.96
VCP-203ENST00000448530 PARD3BQ8TEW8 1205 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms