RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 HSD17B3P37058 310 aa9.59□□□□□ -0.87
SMC6-207ENST00000448223 ALDH5A1P51649 535 aaPredicted RBP9.59□□□□□ -0.87
SMC6-207ENST00000448223 YARSP54577 528 aaKnown RBP9.59□□□□□ -0.87
SMC6-207ENST00000448223 GPS1Q13098 491 aa9.59□□□□□ -0.87
SMC6-207ENST00000448223 TSTA3Q13630 321 aaPredicted RBP9.59□□□□□ -0.87
SMC6-207ENST00000448223 EFHC1Q5JVL4 640 aa9.59□□□□□ -0.87
SMC6-207ENST00000448223 RIN3Q8TB24 985 aa9.59□□□□□ -0.87
SMC6-207ENST00000448223 MANSC1Q9H8J5 431 aa9.59□□□□□ -0.87
SMC6-207ENST00000448223 RNPEPL1Q9HAU8 725 aa9.59□□□□□ -0.87
SMC6-207ENST00000448223 OLA1Q9NTK5 396 aaKnown RBP9.59□□□□□ -0.87
SMC6-207ENST00000448223 K7ENM7 598 aa9.59□□□□□ -0.87
SMC6-207ENST00000448223 NEMP1O14524 444 aa9.59□□□□□ -0.87
SMC6-207ENST00000448223 ALOX5P09917 674 aa9.59□□□□□ -0.87
SMC6-207ENST00000448223 ADAM17P78536 824 aa9.59□□□□□ -0.87
SMC6-207ENST00000448223 ZC2HC1CQ53FD0 456 aaPredicted RBP9.59□□□□□ -0.87
SMC6-207ENST00000448223 TRIQKQ629K1 86 aa9.59□□□□□ -0.87
SMC6-207ENST00000448223 MICALL2Q8IY33 904 aa9.59□□□□□ -0.87
SMC6-207ENST00000448223 TNFRSF25Q93038 417 aa9.59□□□□□ -0.87
SMC6-207ENST00000448223 TLR10Q9BXR5 811 aa9.59□□□□□ -0.87
SMC6-207ENST00000448223 FGFBP2Q9BYJ0 223 aa9.59□□□□□ -0.87
SMC6-207ENST00000448223 SMARCAD1Q9H4L7 1026 aa9.59□□□□□ -0.87
SMC6-207ENST00000448223 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.59□□□□□ -0.87
SMC6-207ENST00000448223 MYH8P13535 1937 aa9.59□□□□□ -0.87
SMC6-207ENST00000448223 C4AP0C0L4 1744 aa9.59□□□□□ -0.87
SMC6-207ENST00000448223 C4BP0C0L5 1744 aa9.59□□□□□ -0.87
SMC6-207ENST00000448223 MYH10P35580 1976 aa9.59□□□□□ -0.87
SMC6-207ENST00000448223 A0A087WXM4 84 aa9.59□□□□□ -0.88
SMC6-207ENST00000448223 VWA5AO00534 786 aa9.59□□□□□ -0.88
SMC6-207ENST00000448223 GNB5O14775 395 aa9.59□□□□□ -0.88
SMC6-207ENST00000448223 SMNDC1O75940 238 aaKnown RBP eCLIP9.59□□□□□ -0.88
SMC6-207ENST00000448223 CCDC166P0CW27 439 aa9.59□□□□□ -0.88
SMC6-207ENST00000448223 IMPDH2P12268 514 aa9.59□□□□□ -0.88
SMC6-207ENST00000448223 ITGA4P13612 1032 aa9.59□□□□□ -0.88
SMC6-207ENST00000448223 TTKP33981 857 aa9.59□□□□□ -0.88
SMC6-207ENST00000448223 RPL5P46777 297 aaKnown RBP9.59□□□□□ -0.88
SMC6-207ENST00000448223 CASP4P49662 377 aa9.59□□□□□ -0.88
SMC6-207ENST00000448223 CERKLQ49MI3 558 aaPredicted RBP9.59□□□□□ -0.88
SMC6-207ENST00000448223 PDZK1Q5T2W1 519 aa9.59□□□□□ -0.88
SMC6-207ENST00000448223 TTC27Q6P3X3 843 aa9.59□□□□□ -0.88
SMC6-207ENST00000448223 ZBTB49Q6ZSB9 765 aa9.59□□□□□ -0.88
SMC6-207ENST00000448223 AKAP14Q86UN6 197 aa9.59□□□□□ -0.88
SMC6-207ENST00000448223 PPHLN1Q8NEY8 458 aaKnown RBP9.59□□□□□ -0.88
SMC6-207ENST00000448223 CASKIN2Q8WXE0 1202 aa9.59□□□□□ -0.88
SMC6-207ENST00000448223 PRCCQ92733 491 aaPredicted RBP9.59□□□□□ -0.88
SMC6-207ENST00000448223 UBE2TQ9NPD8 197 aaPredicted RBP9.59□□□□□ -0.88
SMC6-207ENST00000448223 SH3GLB2Q9NR46 395 aa9.59□□□□□ -0.88
SMC6-207ENST00000448223 PSMC3IPQ9P2W1 217 aaPredicted RBP9.59□□□□□ -0.88
SMC6-207ENST00000448223 SEL1LQ9UBV2 794 aa9.59□□□□□ -0.88
SMC6-207ENST00000448223 STOML2Q9UJZ1 356 aa9.59□□□□□ -0.88
SMC6-207ENST00000448223 PCDHB4Q9Y5E5 795 aa9.59□□□□□ -0.88
SMC6-207ENST00000448223 CLRN2A0PK11 232 aa9.58□□□□□ -0.88
SMC6-207ENST00000448223 MTRF1O75570 445 aaKnown RBP9.58□□□□□ -0.88
SMC6-207ENST00000448223 KRT36O76013 467 aa9.58□□□□□ -0.88
SMC6-207ENST00000448223 MYBP10242 640 aa9.58□□□□□ -0.88
SMC6-207ENST00000448223 GDPD5Q8WTR4 605 aa9.58□□□□□ -0.88
SMC6-207ENST00000448223 GLG1Q92896 1179 aa9.58□□□□□ -0.88
SMC6-207ENST00000448223 C7orf25Q9BPX7 421 aa9.58□□□□□ -0.88
SMC6-207ENST00000448223 ANO3Q9BYT9 981 aa9.58□□□□□ -0.88
SMC6-207ENST00000448223 WBP11Q9Y2W2 641 aaKnown RBP9.58□□□□□ -0.88
SMC6-207ENST00000448223 MYO1GB0I1T2 1018 aa9.58□□□□□ -0.88
SMC6-207ENST00000448223 AREL1O15033 823 aa9.58□□□□□ -0.88
SMC6-207ENST00000448223 TPST1O60507 370 aa9.58□□□□□ -0.88
SMC6-207ENST00000448223 MYCLP12524 364 aaPredicted RBP9.58□□□□□ -0.88
SMC6-207ENST00000448223 QRICH1Q2TAL8 776 aa9.58□□□□□ -0.88
SMC6-207ENST00000448223 ARHGEF19Q8IW93 802 aa9.58□□□□□ -0.88
SMC6-207ENST00000448223 SYTL1Q8IYJ3 562 aa9.58□□□□□ -0.88
SMC6-207ENST00000448223 RIBC1Q8N443 379 aaPredicted RBP9.58□□□□□ -0.88
SMC6-207ENST00000448223 FNIP1Q8TF40 1166 aa9.58□□□□□ -0.88
SMC6-207ENST00000448223 CNPY3Q9BT09 278 aa9.58□□□□□ -0.88
SMC6-207ENST00000448223 ZNF556Q9HAH1 456 aa9.58□□□□□ -0.88
SMC6-207ENST00000448223 TMBIM4Q9HC24 238 aa9.58□□□□□ -0.88
SMC6-207ENST00000448223 KRT84Q9NSB2 600 aa9.58□□□□□ -0.88
SMC6-207ENST00000448223 DNAAF2Q9NVR5 837 aaKnown RBP9.58□□□□□ -0.88
SMC6-207ENST00000448223 SPDYE5A6NIY4 337 aa9.58□□□□□ -0.88
SMC6-207ENST00000448223 TCF3P15923 654 aa9.58□□□□□ -0.88
SMC6-207ENST00000448223 PSMA4P25789 261 aaKnown RBP9.58□□□□□ -0.88
SMC6-207ENST00000448223 IST1P53990 364 aa9.58□□□□□ -0.88
SMC6-207ENST00000448223 POLGP54098 1239 aaPredicted RBP9.58□□□□□ -0.88
SMC6-207ENST00000448223 CSTF3Q12996 717 aaKnown RBP9.58□□□□□ -0.88
SMC6-207ENST00000448223 EAPPQ56P03 285 aaPredicted RBP9.58□□□□□ -0.88
SMC6-207ENST00000448223 MIGA2Q7L4E1 593 aa9.58□□□□□ -0.88
SMC6-207ENST00000448223 FAM118BQ9BPY3 351 aa9.58□□□□□ -0.88
SMC6-207ENST00000448223 PHACTR1Q9C0D0 580 aa9.58□□□□□ -0.88
SMC6-207ENST00000448223 SIPA1L3O60292 1781 aaPredicted RBP9.58□□□□□ -0.88
SMC6-207ENST00000448223 TCP10L2B9ZVM9 353 aa9.58□□□□□ -0.88
SMC6-207ENST00000448223 ARL4AP40617 200 aa9.58□□□□□ -0.88
SMC6-207ENST00000448223 QARSP47897 775 aaKnown RBP9.58□□□□□ -0.88
SMC6-207ENST00000448223 GPC5P78333 572 aa9.58□□□□□ -0.88
SMC6-207ENST00000448223 MTM1Q13496 603 aa9.58□□□□□ -0.88
SMC6-207ENST00000448223 C15orf59Q2T9L4 293 aaPredicted RBP9.58□□□□□ -0.88
SMC6-207ENST00000448223 MIIPQ5JXC2 388 aa9.58□□□□□ -0.88
SMC6-207ENST00000448223 C4orf50Q6ZRC1 276 aa9.58□□□□□ -0.88
SMC6-207ENST00000448223 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.58□□□□□ -0.88
SMC6-207ENST00000448223 NEDD1Q8NHV4 660 aa9.58□□□□□ -0.88
SMC6-207ENST00000448223 RBM46Q8TBY0 533 aaKnown RBP9.58□□□□□ -0.88
SMC6-207ENST00000448223 TRNAU1APQ9NX07 287 aaKnown RBP9.58□□□□□ -0.88
SMC6-207ENST00000448223 CYP39A1Q9NYL5 469 aa9.58□□□□□ -0.88
SMC6-207ENST00000448223 RSL24D1Q9UHA3 163 aaKnown RBP9.58□□□□□ -0.88
SMC6-207ENST00000448223 GGA2Q9UJY4 613 aa9.58□□□□□ -0.88
SMC6-207ENST00000448223 FLT1P17948 1338 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms